Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0062
(509 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0035 - 7592177-7592938 34 0.076
11_06_0610 - 25449085-25453284 30 0.94
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 30 0.94
05_03_0033 - 7585267-7586028 30 0.94
01_01_0595 - 4430738-4430785,4430904-4432679 30 1.2
02_05_0818 + 32004749-32005347,32005905-32006415,32006539-32007300 29 1.6
03_01_0440 - 3414811-3415884,3416000-3416037,3416807-3416966 29 2.2
12_01_0079 + 644754-645932,645966-646061,646193-647122 29 2.9
11_06_0730 - 26728241-26729335,26729998-26730660 29 2.9
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 29 2.9
04_03_0558 + 17111138-17111996,17112474-17112564,17112647-171132... 29 2.9
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 3.8
06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,325... 28 3.8
05_02_0064 + 6267129-6267803 28 3.8
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 28 5.0
09_06_0175 + 21350528-21351136 28 5.0
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 28 5.0
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 27 6.6
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 27 6.6
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 27 6.6
06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053 27 8.8
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 27 8.8
03_01_0329 + 2558726-2559112,2559214-2559449,2559537-2559663,256... 27 8.8
>05_03_0035 - 7592177-7592938
Length = 253
Score = 33.9 bits (74), Expect = 0.076
Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 4/138 (2%)
Frame = +2
Query: 35 PIKHLIPVTPRKQNSQPQPEFSAQPQKEAVYVNQ---EPIYYCPDSPKS-IPPWVXXXXX 202
P P + ++P P+ +P+ EA+ +Q +P Y P+S P
Sbjct: 61 PASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESKPATYSESKPESKAEPESKPEPK 120
Query: 203 XXXXXXXVWCQRPLDGKKSPPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQT 382
P KS P+ P + +EP+ +S + E S PKY+
Sbjct: 121 AESTPQPEAKSEP----KSEPKPKSEPYAEPKSEPKSEPQSEPNPETKAEPKSEPKYEPK 176
Query: 383 SQPVWSTRPSENRKSLPK 436
S+P T P + PK
Sbjct: 177 SEPTPQTEPRAESQPEPK 194
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 0.94
Identities = 36/138 (26%), Positives = 48/138 (34%), Gaps = 5/138 (3%)
Frame = +2
Query: 35 PIKHLIPVTPRKQNSQPQPEFSAQPQKEAVYVNQEPIYYCPDSPKS-IPPWVXXXXXXXX 211
P+K P P S P PE S+ P EA + P P P++ PP +
Sbjct: 835 PVKSSSP-PPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPP 893
Query: 212 XXXXVWCQRPLDG----KKSPPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQ 379
P K+S P TP + E+V S E SPP +
Sbjct: 894 EGKSPPSHTPESSSPPSKESEPPPTPTPKSSPPSHEEYVPPSPAKSTPPPEEKSPPSH-- 951
Query: 380 TSQPVWSTRPSENRKSLP 433
P S+ PSE + P
Sbjct: 952 --TPESSSPPSEESEPPP 967
Score = 29.1 bits (62), Expect = 2.2
Identities = 27/124 (21%), Positives = 34/124 (27%)
Frame = +2
Query: 62 PRKQNSQPQPEFSAQPQKEAVYVNQEPIYYCPDSPKSIPPWVXXXXXXXXXXXXVWCQRP 241
P S P P +QP V P+ SP P P
Sbjct: 1017 PSPVKSSPPPAEKSQPPPSPVESVLPPV---KSSPPHAPVISEPPPTKSSPPQVPVTSEP 1073
Query: 242 LDGKKSPPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQTSQPVWSTRPSENR 421
K SPP E ++PP + SPP + P + P
Sbjct: 1074 PPAKSSPPHEPISPPETPEKSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPPPTV 1133
Query: 422 KSLP 433
K LP
Sbjct: 1134 KPLP 1137
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 30.3 bits (65), Expect = 0.94
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 202 LFLSLYPRWYRLRTVGTVIYGLLINVNSFFLGLRAK 95
L L+L+ + + +G + G+ IN F+LGLR K
Sbjct: 292 LILALFATLFTMCVIGAIGSGVFINEKYFYLGLRGK 327
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = -2
Query: 280 CNKLSRWTLFTIQWSLAPYWRRSFCFLFLSLYPRWYRLRTVGTVIYGLLINVNSFFLGL 104
CN ++RW ++ S+ ++ F F++ ++ + R V VIY +L++ F+L L
Sbjct: 972 CNSITRWHYISVAGSITAWF--MFIFIYSAIMTSFDRQENVYFVIY-VLMSTFFFYLTL 1027
>05_03_0033 - 7585267-7586028
Length = 253
Score = 30.3 bits (65), Expect = 0.94
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 3/137 (2%)
Frame = +2
Query: 35 PIKHLIPVTPRKQNSQPQPEFSAQPQKEAVYVNQ---EPIYYCPDSPKSIPPWVXXXXXX 205
P P + ++P P+ +P+ EA+ +Q +P Y P+S
Sbjct: 61 PASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESKPATYSESKPESKAEPESKPEPK 120
Query: 206 XXXXXXVWCQRPLDGKKSPPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQTS 385
+ + P EL P+ +EP+ +S + E S PK + S
Sbjct: 121 AESTPQPEAKSEPKSEPKPKSELYAEPK---SEPKSEPQSEPNPETKAEPKSEPKSEPKS 177
Query: 386 QPVWSTRPSENRKSLPK 436
+P T P + PK
Sbjct: 178 EPTPQTEPKAESQPEPK 194
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 2 ELVDPRAAGSLPIKHLIPVTPRKQNSQPQPEFSAQPQKEAV 124
+ + P AA I IPV RK+ PQP + P+K AV
Sbjct: 129 DTLPPAAADKAAISPSIPVPVRKRVHAPQPPPAPAPEKAAV 169
>02_05_0818 + 32004749-32005347,32005905-32006415,32006539-32007300
Length = 623
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 348 VRSTVRLNTNRQVSRCGQHGLRKIAKVCPKIVLLTFREVELFPY 479
+R+ VRL T + G GLR +A+ C + RE+ +FP+
Sbjct: 360 IRNCVRLRTFWVLDTVGDEGLRAVAETCSDL-----RELRVFPF 398
>03_01_0440 - 3414811-3415884,3416000-3416037,3416807-3416966
Length = 423
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = -1
Query: 494 WKLPFVWE*FYFPER*KHYLWANFCDFPKAVLTTPADLSVGI*ADCRPHVRPFAFHYSS 318
W + W+ YFP + +L+ D+ + DLSVG D + P F + +
Sbjct: 69 WSIMLGWKGNYFPNEKRRHLYLVLDDWSRGYSIRKIDLSVGNDGDGEHSMPPAIFSFEA 127
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 50 IPVTPRKQNSQPQPEFSAQPQKEAVYVNQEP 142
+P T R+ N QP+P + AQ ++++Q P
Sbjct: 457 VPATAREMNGQPEP-YGAQISNAQIFLSQYP 486
>11_06_0730 - 26728241-26729335,26729998-26730660
Length = 585
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 317 RRSNEMQKGAREVDSPPKYQQTSQPVWSTRPSENRKSLPKDSASNVQG 460
+R +++ V++ P QTS W+ + NR+S+ S V G
Sbjct: 242 KRIEKLENTVTNVENSPYLTQTSSGAWNDIVNMNRRSITSSSTRKVFG 289
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 14 PRAAGSLPIKHLIPVTPRKQNSQPQPEFSAQPQKEAVYVNQEPIYYCPD-SPKSIP 178
P A + P + P +PR + QP+PE + + EA + + + P SP++IP
Sbjct: 505 PVNAEAQPESQINPQSPRNADGQPEPELNPKSPGEAGTSHFDDMPEIPRFSPQNIP 560
>04_03_0558 +
17111138-17111996,17112474-17112564,17112647-17113268,
17113378-17113457,17113871-17113937,17114138-17114263,
17114333-17114415,17115334-17115777,17115834-17115927,
17116038-17116124,17116474-17116594,17116671-17116709,
17116828-17116997
Length = 960
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 23 AGSLPIKHLIPVTPRKQNSQPQPEFSAQPQKEAVY 127
AG+ P K +IP+ PR +++ +FS + + A++
Sbjct: 759 AGATPGKEMIPINPRAKSTPMVKKFSLRTEYTAIF 793
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 338 KGAREVDSPPKYQQTSQPVWSTRPSENRKSLPKDSASNVQGSR 466
KG R+ PK ++ E+RKS PKDS S Q R
Sbjct: 135 KGDRQSQRVPKSPLLTREKERKHKDEHRKSYPKDSHSKEQSRR 177
>06_01_0456 -
3249662-3249710,3249838-3250451,3250694-3250780,
3251509-3252384,3252445-3252534,3252645-3252696,
3253117-3253168,3253265-3253363,3253444-3253528,
3253620-3253668,3253749-3253816,3254417-3254482,
3255690-3255741,3256685-3256767,3256915-3256946,
3257271-3257466,3258542-3258607,3259797-3259869,
3260010-3260224
Length = 967
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 47 LIPVTPRKQNSQPQPEFSAQPQKEAVYVN 133
L P P Q QPQP+ Q Q+ AV +N
Sbjct: 7 LPPTPPPSQQQQPQPQGKEQQQQMAVAMN 35
>05_02_0064 + 6267129-6267803
Length = 224
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 62 PRKQNSQPQPEFSAQPQKE 118
P++Q +P+PE AQPQ++
Sbjct: 5 PQQQQPEPEPEMGAQPQQQ 23
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 44 HLIPVTPRKQNSQPQPEFSAQPQKEAVYVNQEP 142
HL+PV P + PQPEF+ + + P
Sbjct: 280 HLLPVVPYNAFNPPQPEFALMKSDPPIAQRRSP 312
>09_06_0175 + 21350528-21351136
Length = 202
Score = 27.9 bits (59), Expect = 5.0
Identities = 25/72 (34%), Positives = 31/72 (43%)
Frame = +2
Query: 230 CQRPLDGKKSPPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQTSQPVWSTRP 409
C RP G + PP PPR E R GAR V SP + S+P ST
Sbjct: 51 CVRPRRGARPPPLHHQQPPRRRRRAVEESRGGG----GARRVRSP---RTPSRPPNST-- 101
Query: 410 SENRKSLPKDSA 445
R+ P+D+A
Sbjct: 102 -SARRRRPRDAA 112
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 PPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQTSQPVWSTRPSENR-KSLPK 436
PPR PP+ +W R K A +P Y P+ RP+E P
Sbjct: 80 PPRRSQGPPQ----RQQWTREEMRFVKDAGPSITPVSYPARVAPLPEDRPAEEAPPEGPA 135
Query: 437 DSASNVQGSRI 469
D +G RI
Sbjct: 136 DEGLRGEGERI 146
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 68 KQNSQPQPEFSAQPQKEAVYVNQEPIYYCPDSPKSIPP 181
+Q QPQP+ QPQ+ Q + P P+ + P
Sbjct: 198 QQTPQPQPQVHPQPQQPPQLQPQPQLLQQPQLPQQLQP 235
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 357 TVRLNTNRQVSRCGQ--HGLRKIAKVCPKIVLLTFREVELFPYKWK 488
T +N +Q+ C H + VC + L+ + LF Y+WK
Sbjct: 149 TSEVNNKKQLDNCNHDIHVYEDLGHVCHECGLVVRKADSLFHYQWK 194
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 251 KKSPPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPP--KYQQTSQPVWSTRPSENRK 424
K SPP TPP A T P + + + + V S P K + T W + P+ K
Sbjct: 280 KTSPPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETVSWDSLPTSLIK 339
Query: 425 SL 430
S+
Sbjct: 340 SV 341
>06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053
Length = 1613
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 256 LFTIQWSLAPYWRRSFCFLFLSLYPRWYRLR 164
+ T+ ++ PY ++ CFL+LS++P Y +R
Sbjct: 438 VLTLSYNDLPYHLKA-CFLYLSIFPENYVIR 467
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 260 PPRELVTPPRDANTEPEWVRRSNEMQKGAREVDSPPKYQQTSQPVWSTRPSENR--KSLP 433
PP E+V P E EWV R M E+ PP+ + + RP + R + P
Sbjct: 143 PPPEIVDLPAHDVEELEWVSRI--MDDSLSELPPPPQPPASVVASLAARPPQPRQLQRRP 200
Query: 434 KDSA 445
+D A
Sbjct: 201 QDGA 204
>03_01_0329 +
2558726-2559112,2559214-2559449,2559537-2559663,
2560190-2560326,2560467-2560626,2560828-2561106,
2561750-2561920,2562636-2562717,2563397-2563623,
2563682-2563727,2564199-2564281,2564376-2564492,
2564965-2565036
Length = 707
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 429 KLLRFSEGRVDHTG*LVCWYLG 364
+L SEGR+D TG L C Y G
Sbjct: 124 RLAPLSEGRIDETGCLQCSYHG 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,494,229
Number of Sequences: 37544
Number of extensions: 306971
Number of successful extensions: 1217
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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