Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0030
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0152 - 1211859-1211903,1212247-1212443,1213469-1213532,121... 33 0.13
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 0.52
07_03_0172 + 14697741-14697869,14697878-14697998,14698134-146982... 31 0.90
09_03_0077 + 12135950-12136135,12136726-12136812 30 1.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 1.6
08_02_1012 + 23550314-23551504 29 2.1
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 29 2.1
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 29 2.7
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 2.7
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 29 3.6
08_01_1038 + 10540185-10540709 29 3.6
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726... 29 3.6
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 3.6
01_06_0695 - 31292622-31293317 29 3.6
10_08_0924 - 21602510-21603578,21603759-21604275,21604360-21604390 28 4.8
10_08_0218 - 15967064-15967906 28 4.8
07_03_0624 + 20044406-20044756,20045168-20045221 28 4.8
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 28 4.8
01_07_0081 - 40959279-40959375,40959463-40959589,40960138-409603... 28 4.8
09_06_0137 - 21080263-21081894 28 6.3
07_03_0890 - 22332768-22333382 28 6.3
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 28 6.3
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 28 6.3
04_04_1041 - 30329037-30329102,30329199-30329352,30329606-303297... 28 6.3
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 28 6.3
02_05_1095 - 34076910-34077431 28 6.3
01_01_0884 - 6956337-6956431,6956514-6957651 28 6.3
06_03_0730 - 23948801-23949079,23949528-23949588,23949828-239499... 27 8.4
>03_01_0152 -
1211859-1211903,1212247-1212443,1213469-1213532,
1213630-1213802,1213889-1214075
Length = 221
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQP 398
PTPPP+ +RALA A APP+P
Sbjct: 33 PTPPPLAAPSRRALAVRAMAPPKP 56
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.5 bits (68), Expect = 0.52
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Frame = +3
Query: 84 TEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALK----NIGAEEPALQVEGQFQYP 251
TE ++K+++ E +Y +GI + R AL I + P E Q
Sbjct: 820 TEREKVIKEKA--EKARVQRYGGVNSSGIVPSPRSALPPKLAQIKEKAPTANAESSDQPS 877
Query: 252 SEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
+ ++ + N + + +P PPP P + L+ PP+P P
Sbjct: 878 DNQNNPLVVTQLKLAN-IEKRAPRVPRPPPAPSATANTASALSPPPPRPPGAPP 930
>07_03_0172 +
14697741-14697869,14697878-14697998,14698134-14698226,
14700888-14700946,14701003-14701599,14702813-14703020,
14703102-14703178,14703263-14703302,14703413-14703473,
14704120-14704189,14705014-14705235
Length = 558
Score = 30.7 bits (66), Expect = 0.90
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = +3
Query: 90 PIPILKQESSIEP-DGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGG 266
P+P + +S++ P G +Q S + + +++ ++ + E P G
Sbjct: 184 PMPPHQNQSTVAPLHGHFQSSTGSVGPLRSSQAIRFSSVSSNEQYTNANPYNSQPPSSGS 243
Query: 267 TIQLSYIANENGFQPQGSHLPT---PPPIPEVIQRALAYLATAP 389
+ L+Y + GF+P + P P P+ + L Y P
Sbjct: 244 SSTLNYGSQYGGFEPSLTDFPRDAGPTWCPDPVDGLLGYTDDVP 287
>09_03_0077 + 12135950-12136135,12136726-12136812
Length = 90
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 397 GCGGAVARYARARWMTSGIGGGVGK 323
GCGG V R R G GGGVG+
Sbjct: 12 GCGGGVGRKMRTEREELGCGGGVGR 36
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Frame = +3
Query: 141 QYSYETGNGISAAERGALK----NIGAEEPALQVEGQFQYPSEDGGTIQLSYIANENGFQ 308
+Y +GI + R AL I + P E Q + ++ + N +
Sbjct: 532 RYGGVNSSGIVPSPRSALPPKLAQIKEKAPTANAESSDQPSDNQNNPLVVTQLKLAN-IE 590
Query: 309 PQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
+ +P PPP P + L PP+P P
Sbjct: 591 KRAPRVPRPPPAPSATANTASALPPPPPRPPGAPP 625
>08_02_1012 + 23550314-23551504
Length = 396
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 306 QPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 413
QP+ +PPP+P + A A ++T P +P+ RP
Sbjct: 166 QPRSPRPASPPPVPAAPEVASA-VSTPPARPKRGRP 200
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 327 PTPPPIPEVIQRALAYLATAPPQPENNRP 413
P PPP A +LA + PQP RP
Sbjct: 463 PRPPPTTTTAAAANGHLAASQPQPHRRRP 491
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 219 ALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSH-LPTPPPIPEVIQRALAYLATAPPQ 395
AL E + + P+ LS ++ + P P PPP P A A A APP
Sbjct: 121 ALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQESTPPPPPPPPPAPVAAAVSAPAPPS 180
Query: 396 P 398
P
Sbjct: 181 P 181
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 306 QPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 404
Q G P+PPPIPE I+ + A P+N
Sbjct: 1196 QDNGHEYPSPPPIPESIELSPHSKALPESSPDN 1228
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Frame = +3
Query: 186 GALKNIGAEEP---ALQVEGQFQYPSEDGGTIQLSYIANENGFQPQG------SHLPTPP 338
GA +G +P A Q G F P + ++ N G G P PP
Sbjct: 461 GATAALGGTQPPTQANQAAGSFP-PPPPPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPP 519
Query: 339 PIPEVIQRALAYLATAPPQP 398
P+P ++ L+ PP P
Sbjct: 520 PLPNIMSAGFPRLSVPPPLP 539
>08_01_1038 + 10540185-10540709
Length = 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 391 GGAVARYARARWMTSGIGGG 332
GGA R +RARW S +GGG
Sbjct: 3 GGARWRRSRARWTASPVGGG 22
>06_01_0944 +
7264833-7265120,7265511-7265600,7265702-7265798,
7265927-7265988,7266508-7266596,7266702-7266822,
7266915-7267058,7267492-7267820,7268154-7268394,
7269042-7269245,7271150-7271619,7272703-7272746,
7273121-7273211,7273494-7273596,7273682-7273783,
7274214-7274300,7274421-7274531
Length = 890
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 315 GSHLPTPPPIPEVIQRALAYLATAPP 392
GS P+P +PE+++ A+ AT PP
Sbjct: 641 GSTSPSPDVLPEILRHAVPIKATPPP 666
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 306 QPQGSHLPTP-PPIPEVIQRALAYLATAPPQPEN 404
QP H P P PP P+ A L PPQP++
Sbjct: 410 QPARQHQPQPTPPPPQAAPIPAAPLQQQPPQPQH 443
>01_06_0695 - 31292622-31293317
Length = 231
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 328 PHHPQFLKSSSALSHTSPPHPH 393
P+ P SSS+ S TSP HPH
Sbjct: 16 PNSPSSSTSSSSSSSTSPSHPH 37
>10_08_0924 - 21602510-21603578,21603759-21604275,21604360-21604390
Length = 538
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 262 VVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALS 369
VVL SCP + AS LR ++ H Q L+ +S
Sbjct: 151 VVLGSCPKFRVADASDLRAAVWDHSMQLLRERRYVS 186
>10_08_0218 - 15967064-15967906
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -3
Query: 382 VARYARARWMTSGIGGGVGKCDP*GW 305
VARYA A SG GGG G D GW
Sbjct: 25 VARYASAEGGGSGGGGGGGSEDGSGW 50
>07_03_0624 + 20044406-20044756,20045168-20045221
Length = 134
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 252 SEDGGTIQLSYIANENGFQPQGSHLPTP---PPIPE 350
++DGG +A E+G Q + SHLP P PPIP+
Sbjct: 36 ADDGGGRS---VAEEDGGQRRRSHLPDPAGGPPIPD 68
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 309 PQGSHLPTPPPIPEVIQRALAYLATAPPQP 398
P +P PPP P + A A + PPQP
Sbjct: 20 PPPVQVPVPPPPPPPLPPAAAAVEPLPPQP 49
>01_07_0081 -
40959279-40959375,40959463-40959589,40960138-40960339,
40962414-40963361
Length = 457
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 144 YSYETGNGISAAERGALKNIGAEEPALQVEGQFQY--PSEDGGTIQLSYIANENGFQPQG 317
Y+ GN + RGA + AE +L QY S D GTI + + G
Sbjct: 306 YNAAEGNLLQEVRRGADR---AEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTTND 362
Query: 318 SHLPTPPPIPEVIQRALAYLATAPPQ 395
LP P P I +L+++ P+
Sbjct: 363 KPLPAPDPDVPHISPSLSFIKGVLPK 388
>09_06_0137 - 21080263-21081894
Length = 543
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 309 PQGSHLPTPPPIPEVIQRALAYLATAPPQPE 401
P + P+ PP+PE + AL+ L +PP P+
Sbjct: 77 PVPATAPSEPPLPE-LSSALSGLLASPPSPQ 106
>07_03_0890 - 22332768-22333382
Length = 204
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 309 PQGSHLPTPPPIPEVIQRALAYLATAPPQP 398
P P PPP P +RA+ A PP P
Sbjct: 78 PPAEATPPPPPPPPPPERAVPEAADTPPPP 107
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = +1
Query: 241 SSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSL 399
S +A V SS P P A S P P F SSS S +SPP P S+
Sbjct: 42 SPPRASIPVSSSPPLLPPPVAGSK-----PQLPPFSSSSSVASSSSPPLPSSV 89
>04_04_1354 - 32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +1
Query: 289 PMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGH 414
P R +YP P F + +PPHP T GH
Sbjct: 885 PRRCPPFAGQDLYPWRPPFHANQGPFPRHAPPHPCPPFTPGH 926
>04_04_1041 -
30329037-30329102,30329199-30329352,30329606-30329733,
30329918-30330043,30330545-30330675,30331091-30331304,
30332056-30332061,30332216-30332246,30332410-30332867,
30332992-30333136,30333255-30333712,30336945-30337085,
30337146-30337158,30337611-30337636
Length = 698
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 163 MVSPLPSEALSKTSALKNLLYR-LKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
+V+P S +L+K +++ + + ++S A + P DH++ HH
Sbjct: 278 VVTPATSSSLAKEPIARSMSCKAMAASASNYAAAAASTRAACYPSVAVPDPSDHVWAHHF 337
Query: 340 QFLKSSSA 363
L S++A
Sbjct: 338 NMLNSAAA 345
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 241 SSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLK 402
SSTQ + V +C T+ TA+S + P+ +++A + TSP HP +K
Sbjct: 165 SSTQVKANVEQACSTT---TATSAPPNQNPNPSCTGAAATATATTSPAHPPEIK 215
>02_05_1095 - 34076910-34077431
Length = 173
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 241 SSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
+S +V SC SP S R ++ + + +A + +SPP P S +G
Sbjct: 38 ASVSVSSVSRRSCMCSPTNHPGSFRCSLHKEQKRSVHHKAAAAPSSPPSPTSPPASG 94
>01_01_0884 - 6956337-6956431,6956514-6957651
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +3
Query: 294 ENGFQPQGSHLPTPPPIPEVIQ----RALAYLATAPPQP 398
E +P S P+P P P Q A A +A APPQP
Sbjct: 258 ETDLEPDPSPSPSPSPSPAPTQPPTAAAAAAVAPAPPQP 296
>06_03_0730 -
23948801-23949079,23949528-23949588,23949828-23949954,
23950449-23950485,23950987-23951061,23951489-23951598,
23952700-23952754,23952833-23952949,23953201-23953355,
23953577-23953634,23954239-23954460
Length = 431
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 261 GGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNR 410
G T +Y ++ G P+ + P PPP P++++ + +A A +++R
Sbjct: 381 GATEGSNYRSDHFGASPRSALAPPPPPSPDLVE--IVSVAAADDDGDDSR 428
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,795,256
Number of Sequences: 37544
Number of extensions: 408290
Number of successful extensions: 1834
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1821
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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