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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B12
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890...    32   0.53 
01_06_0456 + 29521282-29522064                                         32   0.70 
03_05_0183 - 21681673-21682524                                         30   2.8  
03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399     29   5.0  
03_05_0934 - 28935728-28935859,28936000-28936122,28936172-289362...    29   5.0  
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157...    29   5.0  
06_03_1448 + 30235336-30236763                                         29   6.6  
06_03_1443 + 30182018-30183445                                         29   6.6  
06_03_1440 + 30166515-30167942                                         29   6.6  
06_03_1437 + 30151030-30152457                                         29   6.6  
06_03_1429 + 30100834-30102261                                         29   6.6  
06_03_1425 + 30084383-30085810                                         29   6.6  
06_03_1420 - 30053713-30055140                                         29   6.6  
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764           29   6.6  
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742...    29   6.6  
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384...    28   8.7  

>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
            8905437-8905690,8905785-8908799,8908889-8909001,
            8909975-8910164,8910399-8910512,8910591-8910698,
            8910941-8911073,8911206-8911408,8911626-8911826
          Length = 1889

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 64   GSRMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLXELDS 216
            G+  PR +  D  EW N  PT+   ++ + +PRE     Q+ K  +  L+S
Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFILNS 1443


>01_06_0456 + 29521282-29522064
          Length = 260

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
 Frame = -1

Query: 461 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 339
           AW+C  P +G+RG  +RRR  P    S R  R    +T+RP + S A
Sbjct: 12  AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58


>03_05_0183 - 21681673-21682524
          Length = 283

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 689 SQAFIATLLFDPSMSALPIIAKQNSPSVGLFTHQKE 796
           SQAF A LL D + +A+P++  Q  P+    T  +E
Sbjct: 229 SQAFSAVLLADANRAAIPVVVVQKRPAPETETETEE 264


>03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399
          Length = 146

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = +1

Query: 361 RTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKP 540
           R +   +R E    G +RR   L  D +RG+ +      A H     AG    + RG KP
Sbjct: 59  RCIAEGRREEEEEVGRSRRGKDLDLDDMRGYGET-----ATHHGLRLAGREEVSPRGGKP 113

Query: 541 RVEQKGK 561
           RV+  G+
Sbjct: 114 RVDNGGR 120


>03_05_0934 -
           28935728-28935859,28936000-28936122,28936172-28936284,
           28936363-28936430,28936517-28936600,28936937-28936980,
           28937061-28937204,28937518-28937582,28937722-28937814,
           28938132-28938262,28938375-28938394,28938904-28938987,
           28939157-28939330,28940106-28940195,28940293-28940364,
           28941318-28941365,28941458-28941570,28942786-28942849,
           28942943-28943016,28943162-28943201
          Length = 591

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 301 ESSGFSATIARNDLPLMLHLSCLLTMPD*SQAQXGSSFPADSPKPVP 161
           + +GFS TI R+D  ++  L      P       G+  PA  P PVP
Sbjct: 301 DMAGFSITIMRSDENILQRLDAPTKAPAWPVGSEGNRPPAKIPVPVP 347


>01_07_0197 +
           41912207-41912652,41913226-41913800,41913828-41915748,
           41915836-41916049,41916143-41916394,41916469-41916528,
           41916646-41916776,41916898-41917012,41917084-41917239
          Length = 1289

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 628 YKEFLARG-ARKVTTGITGLWQPSVHSDVAF*SFDVG 735
           YK F A G  RKV  GIT  + PS+  D+AF S  +G
Sbjct: 633 YKIFQAFGLVRKVEKGITRWYYPSMLDDLAFDSAALG 669


>06_03_1448 + 30235336-30236763
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_03_1443 + 30182018-30183445
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_03_1440 + 30166515-30167942
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_03_1437 + 30151030-30152457
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_03_1429 + 30100834-30102261
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_03_1425 + 30084383-30085810
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_03_1420 - 30053713-30055140
          Length = 475

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 466 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 329
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171


>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
          Length = 640

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 394 TTLHAWNETPCARRYY 347
           TT  AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575


>01_06_1406 -
           37073548-37073822,37073892-37074111,37074200-37074246,
           37074404-37074576,37075161-37075238,37075751-37075813,
           37075889-37075961,37076150-37076189,37076302-37076368,
           37076719-37078472,37079128-37079230,37080041-37080078,
           37080221-37080347,37081944-37082152
          Length = 1088

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 402 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 491
           +KR  P K PA S S+ LPG + + G  SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368


>03_02_0740 -
           10836752-10837052,10837756-10837814,10837901-10838476,
           10839965-10841686,10841776-10842173,10842264-10842318,
           10842989-10843048,10843444-10843540,10844885-10844955,
           10845029-10845109,10846054-10846124,10847951-10848119,
           10848521-10848683,10848752-10848942,10849037-10849168
          Length = 1381

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 481 PPQSNSPPGSVLEPDHAGVLNGDE 410
           P  +NS P +V +PD   +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,422,105
Number of Sequences: 37544
Number of extensions: 544312
Number of successful extensions: 1557
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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