Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30027
(765 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 3e-45
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 105 5e-23
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 78 9e-15
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 78 9e-15
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 74 1e-13
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 67 1e-11
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 67 2e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 64 2e-10
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 59 4e-09
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 59 4e-09
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 50 2e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 50 3e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 48 6e-06
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 47 1e-05
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 46 3e-05
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 46 3e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 46 3e-05
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 41 0.001
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 0.003
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 35 0.062
SB_54977| Best HMM Match : MFS_1 (HMM E-Value=0.006) 35 0.062
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 33 0.25
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 32 0.58
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 30 1.8
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 30 2.3
SB_9272| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_58206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 30 2.3
SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094) 29 3.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 3.1
SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07) 29 3.1
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 180 bits (437), Expect = 1e-45
Identities = 104/214 (48%), Positives = 136/214 (63%), Gaps = 11/214 (5%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 180
GKTATFSIS+LQ IDT +RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+
Sbjct: 46 GKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNI 105
Query: 181 REDIRQLESGVHVVVGTPGRVYDMILVVRFMPTPSNFLFLMKLMKCCPEVSRTRSMMSSR 360
EDIR+L+ G H+V GTPGRV+DMI R + T S +K++ + M++
Sbjct: 106 GEDIRKLDYGQHIVSGTPGRVFDMIR-RRNLRTRS-----IKML----VLDEADEMLNKG 155
Query: 361 FCQLMFKSYYSLLPCLMMYWKYLDAL*EIL----------YAYLYRRKSLPWKVLNN-FT 507
F + ++ Y L P + EIL L +R L + + F
Sbjct: 156 FKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFV 215
Query: 508 CIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKV 609
+E EEWK +TLCDLYDTL+I QAVIFCNT+RKV
Sbjct: 216 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV 249
Score = 116 bits (280), Expect = 2e-26
Identities = 69/169 (40%), Positives = 99/169 (58%)
Frame = +3
Query: 258 RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCF 437
RR L +IK+ VLDEADEML++GFK+QI+DV++ L QV+LLSAT+P ++LE++ F
Sbjct: 132 RRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKF 191
Query: 438 MRDPVRILVQKEELTLEGIKQFYMH*IRRMEAGNSV*PV*YTVYCTSCNFLQHPSQGGIG 617
M DP+RILV+++ELTLEGIKQF++ R +++ + T+ T + +
Sbjct: 192 MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDW 251
Query: 618 SLNLCICVTLLYLLCMGDMDQREPEVIMKAVSYWLLLVS*FTTDLWARG 764
GDM Q+E E IMK V +TD+WARG
Sbjct: 252 LTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVL-ISTDVWARG 299
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 611 DWLTESMHLRDFTVSAMHG 667
DWLTE M +FTV++MHG
Sbjct: 250 DWLTEKMREANFTVASMHG 268
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 179 bits (435), Expect = 3e-45
Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 10/213 (4%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRE------CQALILAPTRELAQQIQKVVIALGDHLNAKCHAC 162
GKTATF+ISILQ+IDT+ ++ CQAL+LAPTRELAQQIQKVV+ALGD+++ KCHAC
Sbjct: 134 GKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHAC 193
Query: 163 IGGTNVREDIRQLESGVHVVVGTPGRVYDMILVVRFMPTPSNFLFLMKLMKCCPEVSR-T 339
IGGTNVRED +LE GVHVVVGTPGRV+DMI + T LF+ L + +SR
Sbjct: 194 IGGTNVREDRMKLEEGVHVVVGTPGRVFDMI-NRGVLNTRDIKLFV--LDEADEMLSRGF 250
Query: 340 RSMMSSRFCQLMFKSYYSLLPCLMM--YWKYLDAL*EILYAYLYRRKSLPWKVLNN-FTC 510
+ + F +L LL M + + + L +R+ + + + F
Sbjct: 251 KDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREEVTLEGIKQFFVL 310
Query: 511 IELEEWKLETLCDLYDTLSIAQAVIFCNTRRKV 609
+E E+WKL+TLCDLY+TL+I QAVIF NTRRKV
Sbjct: 311 VEKEDWKLDTLCDLYETLTITQAVIFANTRRKV 343
Score = 122 bits (295), Expect = 2e-28
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +3
Query: 258 RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCF 437
R L+ IKLFVLDEADEMLSRGFKDQI+DVF L VQV+LLSATMP DVLEV+ F
Sbjct: 226 RGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKF 285
Query: 438 MRDPVRILVQKEELTLEGIKQFYM 509
MRD VRILV++EE+TLEGIKQF++
Sbjct: 286 MRDVVRILVKREEVTLEGIKQFFV 309
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 533 WKLCVTCMIH--CLLHKL*FSATPVARWDWLTESMHLRDFTVSAMHG 667
WKL C ++ + + A + DWL M +D TVS+MHG
Sbjct: 316 WKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHG 362
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 105 bits (251), Expect = 5e-23
Identities = 45/65 (69%), Positives = 58/65 (89%)
Frame = +1
Query: 52 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 231
+RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GT
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
Query: 232 PGRVY 246
PGRV+
Sbjct: 61 PGRVF 65
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 77.8 bits (183), Expect = 9e-15
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 180
GKTA + + +L++ DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++
Sbjct: 96 GKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSL 155
Query: 181 REDIRQLESG-------VHVVVGTPGRVYDMILVVRFMPTPSNFLFLMKLMKCCPEVSRT 339
++DI +L + VHV+V TPGRV D L+ + + S L+ E +
Sbjct: 156 KDDILRLYNKDIFVHVVVHVIVATPGRVLD--LMKKKLADMSKCQMLV-----MDEADKL 208
Query: 340 RSMMSSRFCQLMFKSYYSLLPCLMMYWKYLDAL*EILYAYL---YRRKSLPWKVLNNFT- 507
SM + + + K L+ + ++ + +L Y + L+ T
Sbjct: 209 LSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDELTLHGVTQ 268
Query: 508 --CIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVGL 615
E+ K+ L L+ L I Q++IFCN+ ++V L
Sbjct: 269 YYAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVEL 306
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +3
Query: 285 KLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 464
++ V+DEAD++LS FK + + K L + Q++L SAT P V + +R P I +
Sbjct: 198 QMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL 257
Query: 465 QKEELTLEGIKQFY 506
+ELTL G+ Q+Y
Sbjct: 258 M-DELTLHGVTQYY 270
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 77.8 bits (183), Expect = 9e-15
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 180
GKTA + + +L++ DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++
Sbjct: 96 GKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSL 155
Query: 181 REDIRQLESG-------VHVVVGTPGRVYDMILVVRFMPTPSNFLFLMKLMKCCPEVSRT 339
++DI +L + VHV+V TPGRV D L+ + + S L+ E +
Sbjct: 156 KDDILRLYNKDIFVHVVVHVIVATPGRVLD--LMKKKLADMSKCQMLV-----MDEADKL 208
Query: 340 RSMMSSRFCQLMFKSYYSLLPCLMMYWKYLDAL*EILYAYL---YRRKSLPWKVLNNFT- 507
SM + + + K L+ + ++ + +L Y + L+ T
Sbjct: 209 LSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDELTLHGVTQ 268
Query: 508 --CIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVGL 615
E+ K+ L L+ L I Q++IFCN+ ++V L
Sbjct: 269 YYAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVEL 306
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +3
Query: 285 KLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 464
++ V+DEAD++LS FK + + K L + Q++L SAT P V + +R P I +
Sbjct: 198 QMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL 257
Query: 465 QKEELTLEGIKQFY 506
+ELTL G+ Q+Y
Sbjct: 258 M-DELTLHGVTQYY 270
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTN 177
GKT FS+ L+ + T Q +IL PTRE+A Q++ V+ A+G H + C IGG +
Sbjct: 62 GKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGIS 121
Query: 178 VREDIRQLESGVHVVVGTPGRVYDMILVVRFMPTPSNFLFLM 303
+ ED + L+S H+ VGTPGRV ++ +++ T S +F++
Sbjct: 122 LEEDKKALKS-CHIAVGTPGRV-KYLIEQKYLKTESVRMFIL 161
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/77 (27%), Positives = 46/77 (59%)
Frame = +3
Query: 258 RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCF 437
++ L ++++F+LDEAD++L F+ QI+ +F L + Q++ SAT P+ + + +
Sbjct: 148 QKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKY 207
Query: 438 MRDPVRILVQKEELTLE 488
M +P + + + +L+
Sbjct: 208 MTEPTFVRLNAADPSLQ 224
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +1
Query: 139 LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+DMI
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMI 39
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 180
GKT F++ ILQ + + + ALIL PTRELA QI + ALG + KC +GG ++
Sbjct: 13 GKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDM 72
Query: 181 REDIRQLESGVHVVVGTPGRVYD 249
L H+++ TPGR+ D
Sbjct: 73 MSQALMLAKKPHIIIATPGRLID 95
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 66.9 bits (156), Expect = 2e-11
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 177
GKTA F +++L ++D + Q + L+PT ELA+Q KV A+G H + K + + G
Sbjct: 154 GKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQ 213
Query: 178 VREDIRQLESGVHVVVGTPGRVYDMILVVR-FMPTP-SNFLF----LMKLMKCCPEVSRT 339
R + H+++GTPG + D I + F P S F+ +M ++ + S
Sbjct: 214 FP---RGQKCTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIR 270
Query: 340 RSMMSSRFCQ-LMFKSYYSLLPCLMMYWKYLDAL*EILYAYLYRRKSLPWKVLNNFTCIE 516
+ CQ L+F + Y +M + + + + L R + + + +
Sbjct: 271 IHKSLHKDCQVLLFSATYD--EDVMKFAE--TVVPNPIIIRLRREEESLDNIKQYYVVCK 326
Query: 517 LEEWKLETLCDLYDTLSIAQAVIFCNTRR 603
E K E LC++Y LSI Q V+FC+TRR
Sbjct: 327 NSEDKFEALCNMYGVLSIGQCVVFCHTRR 355
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/77 (40%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 282 IKLFVLDEADEMLS-RGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRI 458
+ +FVLDEAD M++ +G +DQ + K L D QV+L SAT +DV++ + + +P+ I
Sbjct: 247 VSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATYDEDVMKFAETVVPNPIII 306
Query: 459 LVQKEELTLEGIKQFYM 509
+++EE +L+ IKQ+Y+
Sbjct: 307 RLRREEESLDNIKQYYV 323
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 65.7 bits (153), Expect = 4e-11
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 GKTATFSISIL-----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 165
GKTA + + +L Q ++ R AL +APTRELA+QI DH K C
Sbjct: 528 GKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCY 587
Query: 166 GGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
GG +V QLE G H +VGTPGR+ D +
Sbjct: 588 GGVSVPYQASQLERGCHFLVGTPGRLQDFV 617
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 255 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK----ILSADVQVILLSATMPDDVLE 422
+R ++ +I+ +LDEAD ML GF IH + + Q ++ SAT PD++
Sbjct: 618 SREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQH 677
Query: 423 VSRCFMR 443
++ F++
Sbjct: 678 LAGSFLK 684
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 70 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 249
L+L PTRELAQQ+Q+V ++G H + GG IR+LE GV + + TPGR+ D
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 250 MI 255
M+
Sbjct: 196 ML 197
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +3
Query: 294 VLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 473
VLDEAD ML GF+ QI + + D Q ++ SAT P +V ++ F+ D V I V
Sbjct: 211 VLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSL 270
Query: 474 ELT 482
LT
Sbjct: 271 GLT 273
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 180
GKTA F++ ILQ++ A++L PTRELA QI LG + K +GG ++
Sbjct: 56 GKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDM 115
Query: 181 REDIRQLESGVHVVVGTPGRVYDMI 255
+ L + HVV+ TPGR+ D I
Sbjct: 116 MKQALSLANKPHVVIATPGRLADHI 140
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +3
Query: 267 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRD 446
L+ I+ VLDEAD +L F D + +F + Q +L SAT+ D + E+ +
Sbjct: 146 LNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSATLTDTMGELQKMSGSQ 205
Query: 447 PVRILVQKEELTLEGIKQFYM 509
P VQ + T+ + Q Y+
Sbjct: 206 PFSYEVQSDIATVAELDQRYL 226
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 177
GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG N
Sbjct: 96 GKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGIN 155
Query: 178 VREDIRQLESGV-HVVVGTPGRV 243
+++D + L++ H+VVGTPGR+
Sbjct: 156 IKKDQQTLKTNCPHIVVGTPGRI 178
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 177
GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG N
Sbjct: 96 GKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGIN 155
Query: 178 VREDIRQLESGV-HVVVGTPGRV 243
+++D + L++ H+VVGTPGR+
Sbjct: 156 IKKDQQTLKTNCPHIVVGTPGRI 178
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 57.6 bits (133), Expect = 1e-08
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Frame = +1
Query: 1 GKTATFSISILQQI------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKC 153
GKTA F + ++ + +S E Q A+ +APTRELA QI +
Sbjct: 760 GKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRP 819
Query: 154 HACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
C GG +V +RQL+SG +++VGTPGR+ D I
Sbjct: 820 VVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFI 853
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +3
Query: 282 IKLFVLDEADEMLSRGFKDQIHDVFKIL----SADVQVILLSATMPDDVLEVSRCFMRDP 449
++ +LDEAD ML GF+ I + + + ++ Q ++ SAT P+++ ++ F+ D
Sbjct: 863 LQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDY 922
Query: 450 VRILVQKEELTLEGIKQ 500
+ + V + T I+Q
Sbjct: 923 LFLTVGRVGGTTSDIEQ 939
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +1
Query: 55 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 234
R+ A+++ PTRELA QI + N +C GGT + E I +L+ G ++V TP
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTP 202
Query: 235 GRVYDMI 255
GR+ DM+
Sbjct: 203 GRMIDML 209
Score = 37.1 bits (82), Expect = 0.015
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +3
Query: 216 CGGGHSRSCI*YDTRRALHANTIKLFVLDEADEMLSRGFKDQI-----HDVFKILSA--- 371
C G + + R + VLDEAD M GF+ QI V +I+
Sbjct: 200 CTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRP 259
Query: 372 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 500
D Q ++ SAT P + ++R + P+ I V + ++Q
Sbjct: 260 DRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQ 302
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 GKTATFS----ISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 165
GKTA F + I+ Q + + + LI APTREL QQI G N A
Sbjct: 566 GKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVF 625
Query: 166 GGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
GG N E + L+ G +VV TPGR+ D +
Sbjct: 626 GGGNKYEQSKALQEGAEIVVATPGRLIDHV 655
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 DTRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSR 431
+T+ L+ N ++ V+DEAD +L GF++++ + +IL + Q +L SAT +V ++++
Sbjct: 711 NTQGFLYKN-LQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769
Query: 432 CFM-RDPVRILV--QKEELTLEGIKQFYM 509
+ R P+ + V KE T+EG++Q Y+
Sbjct: 770 LSLKRSPLYVGVDDHKETSTVEGLEQGYI 798
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 GKTATFSISILQ---QIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 168
GKT F + +++ ++ R +I++PTREL+ Q V L H N +G
Sbjct: 621 GKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMG 680
Query: 169 GTNVREDIRQLESGVHVVVGTPGRVYD 249
G N + + +L+ GV++++ TPGR+ D
Sbjct: 681 GVNRKAEAERLQKGVNLLIATPGRLLD 707
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 67 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 246
ALI+APTRELA Q++ ++ + + K A +GG + R L+ +VV TPGR++
Sbjct: 221 ALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLW 280
Query: 247 DMI 255
++I
Sbjct: 281 ELI 283
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Frame = +3
Query: 255 TRRALHANTIKLF---VLDEADEMLSRGFKDQIHDVFKIL----SADVQVILLSATMPDD 413
T + H + I+L V+DEAD M+ +G +++ + +++ S +++V A P +
Sbjct: 328 TNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELIHLKKSGNMEVDQEDAERPSN 387
Query: 414 VLEVSRCFMRDPVRILVQKEEL 479
R R+ ILVQK L
Sbjct: 388 SSSEKRYIQRN---ILVQKSSL 406
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +3
Query: 267 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQ---VILLSATMP-DDVLEVSRC 434
L +IK+ VLDEADEML++GFK+QI+DV++ L Q V L ++P + L + C
Sbjct: 31 LDTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQNSYVEYLHESVPKSEPLSSNSC 90
Query: 435 FMRDPV 452
DP+
Sbjct: 91 SPGDPL 96
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Frame = +1
Query: 1 GKTATFSISILQQI-DTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHAC 162
GKT +F++ +++++ D + R + L++APTRELA+Q+ L +L C
Sbjct: 122 GKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLKSNLEVYC--I 179
Query: 163 IGGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
GG + SG+ V+VGTPGR+ D +
Sbjct: 180 YGGMPYEPQENAINSGLDVLVGTPGRILDFM 210
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +1
Query: 1 GKTATFSISILQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 168
GKT F I I++ Q TS+ AL+++PTRELA Q +V++ +G+ + IG
Sbjct: 99 GKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIG 158
Query: 169 GTNVREDIRQLESGVHVVVGTPGRV 243
G +++ + +++ ++VV TPGR+
Sbjct: 159 GKDLKNEQKRIMK-TNIVVCTPGRL 182
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +3
Query: 279 TIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPV 452
++++ VLDEAD +L GF ++ + + L ++ Q +L SAT V +++R ++ V
Sbjct: 196 SLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +3
Query: 282 IKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 461
+++ VLDEAD ML GF I V L A Q +L SAT DD+ ++ + +P+ I
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIE 63
Query: 462 VQKEELTLEGIKQ 500
V + + + Q
Sbjct: 64 VARRNTASDQVLQ 76
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +3
Query: 285 KLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 464
+ VLDEAD M+ GF++ + +F + Q +L SATMP + ++ + PV + V
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +3
Query: 285 KLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 464
+ VLDEAD M+ GF++ + +F + Q +L SATMP + ++ + PV + V
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 174
GKTA F I + +++ T + +ALIL+PTRELA Q QK + LG K +GG
Sbjct: 330 GKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELGRFTGLKSSVILGGD 389
Query: 175 NV 180
+V
Sbjct: 390 SV 391
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +3
Query: 255 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRC 434
+R+A+ + V+DE D ML GF+ Q+ + + LS Q +L SAT+P + ++
Sbjct: 271 SRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASR 330
Query: 435 FMRDPVRILVQKEELTLEGIKQFYM 509
+ PV I L + +KQ +
Sbjct: 331 LLNAPVFISAGSPSLPTKAVKQLIL 355
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +3
Query: 276 NTIKLFVLDEADEMLSRGFKDQIHDVFKILSADV----QVILLSATMPDDVLEVSRCFMR 443
++I+ VLDEAD ML GF+ QI + S Q ++ SAT P ++ ++R F+
Sbjct: 998 DSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLE 1057
Query: 444 DPVRILVQKEELTLEGIKQ 500
+ + + V K T E I Q
Sbjct: 1058 NYIFLAVGKVGSTSENITQ 1076
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 151 CHACI--GGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
C C+ GG ++ +R+L+ H++V TPGR+ DM+
Sbjct: 954 CRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMM 990
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Frame = +1
Query: 1 GKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 153
GKTA F+I +L I + + + ALILAPTRELAQQI++ ++ G L +
Sbjct: 150 GKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRT 209
Query: 154 HACIGGTN 177
+ IGG +
Sbjct: 210 VSVIGGAD 217
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +1
Query: 52 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 231
++ +A I+ P RELA QI K +L H + IGG + LES V ++V T
Sbjct: 453 LKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVAT 512
Query: 232 PG 237
PG
Sbjct: 513 PG 514
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 327 GFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 464
GF+ +I + + D Q ++ SAT P V ++ +M DPVR+ V
Sbjct: 2 GFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFV 47
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.1 bits (77), Expect = 0.062
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 GKTATFSISILQQIDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTN 177
GK+ F +L + R +I+ PTRELA Q + +V LGD + + + G +
Sbjct: 209 GKSLVF---LLPSVQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD--KSIVASFVSGVD 263
Query: 178 VREDIRQLESGVH---VVVGTPGRVYDMI 255
+ + L+ +H +V+GTP R+++++
Sbjct: 264 LSRQEKLLKDSLHPPRIVIGTPKRLWEIV 292
>SB_54977| Best HMM Match : MFS_1 (HMM E-Value=0.006)
Length = 698
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 313 KCCPEVSRTRSMMSSRFCQLMFKSYYSLLPCLMMYWKYL 429
KCCP V+RT ++ F F ++ SLLP L +Y+K L
Sbjct: 398 KCCPSVNRT-LLVPKGFYFFFFSAWGSLLPYLALYFKQL 435
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 327 GFKDQIHDVFKILSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELT 482
GF+ I+ + L + L SAT D+V + R +R+PVR+ V +E+LT
Sbjct: 2 GFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTV-REKLT 52
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 267 LHANTIKLFVLDEADEMLSR---GFKDQIHDVFKILS-ADVQVILLSATMPDDVLEVSRC 434
+ + ++ +LDEAD++ GF++QI +++ + D+ L SAT+ + + E +
Sbjct: 278 IELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAGL 337
Query: 435 FMRDPVRILV 464
+ + VR+ V
Sbjct: 338 HLDNHVRVTV 347
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 270 EAHDEYHIIYTTWSAHHHMNTTLQLANIFTD 178
++H II TW+ + H NTTL+ A F D
Sbjct: 103 KSHGRREIIRQTWTRNKHQNTTLEGAKHFYD 133
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 1 GKTATFSISILQQI---DTSIRECQALILAPTRELAQQ 105
GKTA F + IL+++ T + L++ PTRELA Q
Sbjct: 59 GKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_9272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 493 LNNFTCIELEEWKLETLCDLYDTLSIAQAVIFCN 594
L N +C+ L+ + LYD LS+A +I CN
Sbjct: 255 LKNLSCLPLDRAAEQFASRLYDNLSVAAGLIECN 288
>SB_58206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 273 ANTIKLFVLDEADEMLSRGFKDQIHDVFK---ILSADVQVILLSATMPDDVLEVSRCFMR 443
A + + +DE +E++S G Q+ F+ I +A+ + LS + +R +
Sbjct: 174 AEAVHVGEVDELEEVVSTGIAVQLRTQFQKGDISNAEKREKRLSYNPEKGTINETRSIFK 233
Query: 444 DPVRILVQKEELTLEGI 494
DP + VQKE+ ++ +
Sbjct: 234 DPPHLPVQKEQNDVDNL 250
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 148 KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMILVVRF-MPTPSNFL 294
K A GG V L G VVV TPGR+ D+ + M P L
Sbjct: 197 KAVAVCGGVPVSTQTIALREGADVVVATPGRLLDLYKITYLVMDEPDRML 246
>SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094)
Length = 436
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 503 KLFNTFQGKLFLLYKYAYRISHKASRYFQYIIRHG 399
+L T GK FLL Y YR S K + +F + R G
Sbjct: 387 RLMETQSGKHFLLIVYIYRESRKVTVHFGHDYRKG 421
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 255 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF 356
T + + +K F+LDEAD +L++G D I ++
Sbjct: 151 TTDKISLHQVKFFILDEADGLLAQGNNDLIMKIY 184
>SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07)
Length = 721
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 256 VSYHIHDLECPP---PHEHHSPVGEYLHGHWC 170
++Y H+ CP PHEH P+ H H C
Sbjct: 663 MNYLSHEHMCPMNNVPHEHMGPINNVSHEHMC 694
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 37 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 165
Q D++++E IL ELA++IQK++ LN K AC+
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 153 AFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 40
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,463,197
Number of Sequences: 59808
Number of extensions: 607189
Number of successful extensions: 2254
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2232
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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