Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20162
(596 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 94 9e-20
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 82 4e-16
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 71 9e-13
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 59 2e-09
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 58 7e-09
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 51 8e-07
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 51 8e-07
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 50 1e-06
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 49 2e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 49 2e-06
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 48 4e-06
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 48 6e-06
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 48 6e-06
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 48 8e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 45 5e-05
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 45 5e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 44 7e-05
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 44 7e-05
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 43 2e-04
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 42 3e-04
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 40 0.002
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 39 0.003
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 39 0.003
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 39 0.004
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 38 0.008
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 37 0.011
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 37 0.014
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.019
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 35 0.043
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 35 0.057
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 34 0.10
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 33 0.13
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 33 0.18
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 33 0.23
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 32 0.31
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 31 0.53
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_59786| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-19) 31 0.93
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.93
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 30 1.2
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 2.2
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 29 2.2
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 29 2.2
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 29 2.9
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 29 3.8
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 28 6.6
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 28 6.6
SB_24049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 28 6.6
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 27 8.7
SB_13158| Best HMM Match : PAN (HMM E-Value=9.4e-06) 27 8.7
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 27 8.7
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 145 bits (351), Expect = 3e-35
Identities = 65/82 (79%), Positives = 70/82 (85%)
Frame = +2
Query: 281 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAG 460
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 461 QEDYDRLRPLSYPQTDSSLYVF 526
QEDYDRLRPLSYPQTD L F
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCF 82
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 522 FFAGQPASFENVRAKWYPEVRHHCP 596
F P+SFENV+ KW PE+ HHCP
Sbjct: 82 FSVVSPSSFENVKEKWVPEITHHCP 106
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 136 bits (330), Expect = 1e-32
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = +2
Query: 284 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ 463
Q +K VVVGDG VGK+ LI+ TTNAFPGEYIPTVFDNYS+N+M+DGK N+GLWDTAGQ
Sbjct: 4 QNVKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQ 63
Query: 464 EDYDRLRPLSYPQTDSSLYVF 526
EDYDRLRPLSYP TD L F
Sbjct: 64 EDYDRLRPLSYPMTDVFLVCF 84
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 522 FFAGQPASFENVRAKWYPEVRHHCP 596
F G SFEN+ +KW PE+ HH P
Sbjct: 84 FDIGSRTSFENIESKWLPELNHHMP 108
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 118 bits (284), Expect = 4e-27
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDY 472
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK + L LWDTAGQEDY
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 5990
Query: 473 DRLRPLSYPQTDSSLYVF 526
DRLRPLSYP TD L F
Sbjct: 5991 DRLRPLSYPDTDVILMCF 6008
Score = 35.1 bits (77), Expect = 0.043
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 522 FFAGQPASFENVRAKWYPEVRHHCP 596
F P S EN+ KW PEV+H CP
Sbjct: 6008 FSIDSPDSLENIPEKWTPEVKHFCP 6032
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 93.9 bits (223), Expect = 9e-20
Identities = 42/83 (50%), Positives = 52/83 (62%)
Frame = +2
Query: 278 KMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTA 457
K + +KCV+VGDG VGKT LL+SY + FP Y+PT FD Y V V+ K + DTA
Sbjct: 15 KKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTA 74
Query: 458 GQEDYDRLRPLSYPQTDSSLYVF 526
GQED+D LRPL Y D + F
Sbjct: 75 GQEDFDALRPLCYSSADVFIVCF 97
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 522 FFAGQPASFENVRAKWYPEVRHHCP 596
F P SF NV +KW PE+R P
Sbjct: 97 FSVVSPTSFANVASKWIPEIREFQP 121
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 86.6 bits (205), Expect = 1e-17
Identities = 43/80 (53%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQE 466
+K +VGDGAVGKT L I+ TN FP EYIPT +D + VDG L+D+AG E
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGE 66
Query: 467 DYDRLRPLSYPQTDSSLYVF 526
D+DRLRPL YP TD L F
Sbjct: 67 DFDRLRPLGYPNTDIFLVCF 86
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 540 ASFENVRAKWYPEVRHHCP 596
ASFENV +W PE+ H P
Sbjct: 92 ASFENVALRWLPELDHFSP 110
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 81.8 bits (193), Expect = 4e-16
Identities = 40/79 (50%), Positives = 49/79 (62%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
I ++VGD GKT LL +Y N F +Y TVF++ S V VDG+ I L LWDT+G ED
Sbjct: 233 IPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHED 292
Query: 470 YDRLRPLSYPQTDSSLYVF 526
YD +RPLSY D L F
Sbjct: 293 YDHVRPLSYNNVDIVLICF 311
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/84 (44%), Positives = 46/84 (54%)
Frame = +2
Query: 275 AKMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDT 454
A + +K V+ GD VGKT LI+ T N G PT F NY + V + L LWDT
Sbjct: 2 ASERKLKVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELGLEVGSQKFLLDLWDT 59
Query: 455 AGQEDYDRLRPLSYPQTDSSLYVF 526
G +YDRLRPL+Y +D L F
Sbjct: 60 EGTTEYDRLRPLTYQGSDIILLCF 83
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPINLGLWDTAGQED 469
K ++VGD VGKTCL+ +T FP PT+ +++ V VDG+ + L +WDTAGQE
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 470 YDRLRPLSYPQTDSSLYVF 526
+ + Y D + +
Sbjct: 69 FRSITQSYYHNADGVIVTY 87
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDY 472
K VVVG G VGK+ L I + + F +Y PT+ D+Y ++D + +L + DTAGQE++
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEF 72
Query: 473 DRLRPLSYPQTDSSLYVF 526
+R + L VF
Sbjct: 73 SAMREQYMRSGEGFLLVF 90
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = +2
Query: 281 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAG 460
M+ K VV+G G VGK+ L + + T F +Y PT+ D Y + VD P L + DTAG
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAG 60
Query: 461 QEDYDRLRPLSYPQTDSSLYVF 526
E + +R L L V+
Sbjct: 61 TEQFASMRDLYIKNGQGFLLVY 82
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQED 469
K +++GD VGK+ LL+ + + F YI T+ ++ + VDGK I L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 470 YDRLRPLSYPQTDSSLYVF 526
+ L Y + ++
Sbjct: 70 FRTLTTAYYRSAHGIVLIY 88
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAG 460
IK V VGD VGKT L + TT+ FP +I ++FD YS + +DGK + L DT G
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPG 66
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 281 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTA 457
+ +K ++VG+ VGK+ LL+ +T + F + T+ ++ + V+G L +WDTA
Sbjct: 6 LTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTA 65
Query: 458 GQEDYDRLRPLSYPQTDSSLYVF 526
GQE + L P Y + V+
Sbjct: 66 GQERFRTLTPSYYRGAQGVILVY 88
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLIS--YTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWD 451
I+ V++GD VGKTCLL+ Y +N +++ ++ +NY AN++VDGK L L D
Sbjct: 19 IRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCD 74
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQED 469
K V++GD VGK+ LL +T N F E T+ ++ ++ V+GK I +WDTAGQE
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 470 YDRLRPLSYPQTDSSLYVF 526
Y + Y ++ V+
Sbjct: 74 YRAITSAYYRGAVGAVLVY 92
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 284 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAG 460
+ K +++GD VGKTCL T FP T+ D + ++ ++G+ + L LWDTAG
Sbjct: 45 KTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAG 104
Query: 461 QEDY 472
QE +
Sbjct: 105 QERF 108
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQED 469
K +V+GD VGK+ L+ + + F + T+ D + + +DGK + L LWDTAG+E
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 470 YDRLRPLSYPQTDSSLYVF 526
Y L + D +L VF
Sbjct: 72 YRALSRSFFRGADGALLVF 90
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQED 469
K +++G+ AVGKT L Y ++F ++ TV D V + K + L +WDTAGQE
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 470 YDRLRPLSY 496
Y + Y
Sbjct: 83 YRTITTAYY 91
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ-ED 469
+ ++GD VGKT LL+ + + F GEY PT+ D Y ++ +D + L + DTA + ++
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQN 66
Query: 470 YDRLRPLSYPQTDSSLYVF 526
+LR + D + V+
Sbjct: 67 SCKLRDQFVREGDGFIVVY 85
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +2
Query: 233 SIRCVLFLTKIG*KAKMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSAN 409
S L ++ + + + K V+ GD AVGK+ ++ N F T+ D
Sbjct: 424 STNTALNMSNVDERVPERMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKT 483
Query: 410 VMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDS--SLYVFRWSTSLIRKRSGQVVSRSS 583
++VDGK L LWDTAGQE + + + + D LY TS + R S
Sbjct: 484 LVVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEES 543
Query: 584 ASLP 595
S P
Sbjct: 544 CSKP 547
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 278 KMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDT 454
K+ K V++G+ AVGK+ L++ + F T+ + + V +D + +WDT
Sbjct: 18 KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDT 77
Query: 455 AGQEDYDRLRPLSYPQTDSSLYVF 526
AGQE Y L P+ Y +++ V+
Sbjct: 78 AGQERYHSLAPMYYRGAQAAIVVY 101
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
+K V++G+ VGK+ L + + T F GEY T+ Y + V G+ + + L DTAG+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENS 921
Query: 470 YDRL-RPLSYPQTDSSLYVFRWSTSLIR-KRSGQVVSRSSASLP 595
+L R L + LY S R G + + A +P
Sbjct: 922 PAKLERCLEIGEVFVVLYSITSRHSFDEASRIGTYIKKEKARMP 965
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 287 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQ 463
+ K +VVGD VGKT L+ +T F TV + V+ + G + L WDTAGQ
Sbjct: 11 SFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQ 70
Query: 464 EDYDRLRPLSYPQTDSSLYVF 526
E + + Y D+ + VF
Sbjct: 71 EKFRGITQSYYRNADAVILVF 91
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDY 472
K V+G +VGK+ L I + F Y PT+ + ++ N+ G+ L L DTAGQ++Y
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDEY 67
Query: 473 DRLRPLSY 496
+ P SY
Sbjct: 68 S-IFPQSY 74
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 305 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGK-PINLGLWDTAGQEDYDRL 481
VGDG GKT + + T F +YI T+ + + PI +WDTAGQE + L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 482 RPLSYPQTDSSLYVF 526
R Y Q ++ +F
Sbjct: 98 RDGYYIQGQCAIIMF 112
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPIN--LGLWDTAGQE 466
+ VV+G G VGKT L+ + + F +Y PTV D Y +V + K N L + DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTL-SKDFNAFLEIMDTAGSY 167
Query: 467 DYDRLRPLSYPQTDSSLYVF 526
+ ++ L+ D+ + V+
Sbjct: 168 PFPAMKKLTIQNADAFVLVY 187
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 47.6 bits (108), Expect = 8e-06
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVD------------GKPI 433
IK + +GD VGKT LL YT + F ++PT+ ++ +V G+ I
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 434 NLGLWDTAGQEDYDRLRPLSYPQTDSSLYVF 526
+L LWDTAGQE + L + L VF
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVF 197
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQED 469
K V +GD VGK+ L + + F +Y PT+ D + V++D + L +WDTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 470 YDRLRPLSYPQTDSSLYVF 526
+ L ++++L VF
Sbjct: 225 FRCLIHSYIRDSEAALIVF 243
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 311 DGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRP 487
DG VGK+ L+ + F + T+ + + +V +DG+ L +WDTAGQE + LR
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRT 278
Query: 488 LSYPQTDSSLYVF 526
Y +D L V+
Sbjct: 279 PFYRGSDLCLLVY 291
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ-- 463
++ VV+G VGK+ L + + T F GEY T+ + + +D + ++L + DTAG+
Sbjct: 17 VRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAGEVR 76
Query: 464 EDYDRLRPLSYPQTDSS 514
Y L +S +D+S
Sbjct: 77 VRYPNLGRISGQYSDNS 93
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDY 472
K ++G G VGKT LL ++ + F +++PTV D + +V +DG + + DTAG +
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTYAF 73
Query: 473 DRLRPLSYPQTDSSLYVF 526
+R L+ + + VF
Sbjct: 74 PVMRRLAIHTCQAFIVVF 91
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/85 (24%), Positives = 44/85 (51%)
Frame = +2
Query: 272 KAKMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWD 451
+ ++ V G +VGKT L++ + AF +Y PT+ D + +V + + L + D
Sbjct: 23 ETSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIID 82
Query: 452 TAGQEDYDRLRPLSYPQTDSSLYVF 526
T+G ++ +R + + D+ + V+
Sbjct: 83 TSGTYEFPAMRKVDIAKGDAFVLVY 107
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 272 KAKMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLW 448
K + K V +GD VGK+ L + + + + T+ ++ M V+G+ I + LW
Sbjct: 891 KTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Query: 449 DTAGQEDYDRLRPLSYPQTDSSLYVF 526
DTAGQE + + + + D L +
Sbjct: 951 DTAGQERFRSITKQYFRKADGILIFY 976
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 284 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQ 463
+A+ V+G VGK+ + T F GEY P + NY ++ +DG+ + L + DTAG+
Sbjct: 180 RALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGK 239
Query: 464 EDYD-RLRPLSYPQT 505
+ R+ P +T
Sbjct: 240 VSREARMSPRQKTKT 254
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGK-PINLGLWDTAGQE 466
+ +++GD VGK+ LL +T F PTV ++ V+ + G I L +WDTAGQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 467 DYDRLRPLSYPQTDSSLYVF 526
+ + Y T L ++
Sbjct: 75 RFRSITYSYYRNTVGCLIIY 94
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDT 454
K V++GD VGK+ LL +T N F E T+ ++ ++ VDGK I +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 299 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTA 457
V++G VGK+ LL+ + T F EY PT+ Y + +D P L + DTA
Sbjct: 131 VLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA 183
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAF-PGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
K V++G+ VGKT L N F PG D+ S V + K + L +WDTAG E
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 470 YDRLRPLSYPQTDSSLYVF 526
+ + Y + + +F
Sbjct: 73 FRTVTKNYYRGAHACILMF 91
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFP-GEYIPTVFDNYSANVMVDGKPINLGLWDTA 457
K V++GD VGK+ LL YT N F G + NV ++GK + +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVF---DNYSANVMVDGKPINLGLWDTAGQ 463
K +++G+ VGK+CL+ F +++ + D + + D K I L + DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 464 EDYDRLRPLSYPQTDSSLYVF 526
E Y + P + VF
Sbjct: 412 ERYFSILPAYFRGVQGVFLVF 432
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 362 FPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLYVF 526
F G YI T+ ++ + +DG+ + L +WDTAGQE + + Y T + V+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVY 57
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 21/86 (24%)
Frame = +2
Query: 284 QAIKCVVVGDGAVGKTCLLIS-------YTTNAFPGE----YIPTVF--DNY-------- 400
+ IKCVVVG+ VGKT L+ + T A P + PTVF D Y
Sbjct: 13 ELIKCVVVGNSGVGKTRLICAEALGVGMKTQEANPRHVRHVHYPTVFAIDQYHVSAEIRD 72
Query: 401 SANVMVDGKPINLGLWDTAGQEDYDR 478
AN +DG ++L LWDT G +R
Sbjct: 73 RANFTIDGVSVSLRLWDTFGDHSMNR 98
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 522 FFAGQPASFENVRAKWYPEVRHHCP 596
F P+SF++V A WYPE++ +CP
Sbjct: 112 FAINTPSSFKDVNAVWYPEIKKYCP 136
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 284 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEY--IPTVFDNYSANVMVDGKPINLGLWDTA 457
+ K + G VGKT + +T+ FP E + + + V + K + + LWDT
Sbjct: 7 EVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTL 66
Query: 458 GQEDYDRLRPLSYPQTDSSLYVF 526
G E+Y+ L Y + L V+
Sbjct: 67 GMEEYESLTRNHYSNSKVVLVVY 89
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 281 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY 400
M+ K VV+G G VGK+ L + + T F +Y PT+ D Y
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 341 ISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLY 520
IS + + GEY D++S ++VD K N+ + + Q YD+LR YP TD L
Sbjct: 88 ISESEDDHSGEYD---LDSWSGPIIVDNKAYNIEIHECTSQTAYDQLRAELYPDTDVFLV 144
Query: 521 VF 526
F
Sbjct: 145 CF 146
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM--VDGKPINLGLWDTAGQE 466
K +VVGD GK + Y N + Y PT+ +++ + I L +W AGQE
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQE 79
Query: 467 DYDRLRPLSYPQTDSSLYVF 526
+ + + Y D+ + +F
Sbjct: 80 RFSSMTRVYYKGADACVVLF 99
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLIS-YTTNAFPGEY-------IPTVFDNYSANVMVDGKPINLGL 445
+K VVGD VGKTC+L + + P + IP V +++ N D +
Sbjct: 9 LKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTY 68
Query: 446 WDT---AGQEDYD--RLRPLSYPQTDSSLYVF 526
WDT A E+ D +LRPL Y TD + F
Sbjct: 69 WDTCTLARTEELDLSKLRPLEYRDTDVFIICF 100
Score = 31.1 bits (67), Expect = 0.71
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 537 PASFENVRAKWYPEVRHHCP 596
P SF+NV W PE++H+ P
Sbjct: 105 PTSFQNVSTVWVPELKHYMP 124
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDY 472
K +++GD VGKTC+L ++ +AF +I T+ +N N + L+ ++
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI-ENVLLNTLAHTLNFERTLFRHGNSGNF 69
Query: 473 DR 478
DR
Sbjct: 70 DR 71
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 36.7 bits (81), Expect = 0.014
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 22/100 (22%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTN---------------------AFPGEYIPTVFDNYSAN 409
K +++GD VGK+CLL+ + + + YI T+ ++
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 410 VM-VDGKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLYVF 526
+ +DGK I L +WDTAGQE + + Y + V+
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVY 109
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 302 VVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRL 481
V G VGKT ++ + F EY PTV D YS + +G + L D++G + +
Sbjct: 13 VFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQFPAM 72
Query: 482 RPLS 493
R ++
Sbjct: 73 REVA 76
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 36.3 bits (80), Expect = 0.019
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Frame = +2
Query: 284 QAIKCVVVGDGAVGKTCLLI----SYTTNAFPG-----------EYIPTVFDNYSANVMV 418
QA+K V+VGD +GK+ L+ ++ T+A G EY PT YS NV
Sbjct: 4 QALKLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYS 63
Query: 419 DGKPINLGLW-----DTAGQEDYDRLRPLSYPQTDSSLYVF 526
+ + ++ DT G D +RPL+Y D + F
Sbjct: 64 NPTGVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCF 104
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 540 ASFENVRAKWYPEVR 584
ASFENV +KW+PE+R
Sbjct: 110 ASFENVASKWFPEIR 124
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 36.3 bits (80), Expect = 0.019
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +2
Query: 287 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQE 466
AIK VVVG+GAVGK+ ++ SAN G+ I L LWDTAGQE
Sbjct: 9 AIKVVVVGNGAVGKSSMI-------------------QSAN----GEDIRLMLWDTAGQE 45
Query: 467 DYDRLRPLSY 496
++D + Y
Sbjct: 46 EFDAITKAYY 55
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDT 454
K ++G AVGKT L+ + F E+IPT+ D + DG N+ L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 410 VMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLYVF 526
++V+ K +WDTAGQE + L PL Y +++ V+
Sbjct: 2 MIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVY 40
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 34.7 bits (76), Expect = 0.057
Identities = 28/75 (37%), Positives = 36/75 (48%)
Frame = +2
Query: 302 VVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRL 481
VVG G VGK+ + I Y N F T D Y GK ++ + DTAGQE+Y
Sbjct: 2603 VVGSGGVGKSSVTIRYLKNEF------TEID-YC------GKLYDIEVVDTAGQEEYTSF 2649
Query: 482 RPLSYPQTDSSLYVF 526
R S D+ L +F
Sbjct: 2650 RDSSLATGDAFLVLF 2664
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 34.3 bits (75), Expect = 0.076
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 275 AKMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM 415
A ++ + V+G+G VGK+ L+ + F EY+PT+ + S +++
Sbjct: 23 AYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEEFVSKHLL 69
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
++ ++VG A GKT +L + P IPT+ N +V+ K I +WD GQ+
Sbjct: 91 LRLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVE---VVEYKNIKFTVWDIGGQDK 146
Query: 470 YDRLRPLSYPQTDSSLYV 523
L L + +T ++V
Sbjct: 147 IRLLWRLYFQETQGLIFV 164
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 335 LLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPL 490
L + + T F GEY P + +Y ++ V G+ I + + DTAG+ D++ L
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPDKVDAL 53
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 299 VVVGDGAVGKTCLLISYTTNAFPGEYIPTV 388
VV+G VGKT L++ + T F EY PT+
Sbjct: 328 VVLGAAGVGKTALVVRFVTGRFLNEYDPTL 357
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
++ V++G A GKT +L IPT+ ++ + K + L +WD GQ
Sbjct: 20 VRIVMLGLDAAGKTTILYKLKLKETVST-IPTI--GFNVETLQPTKNVTLTIWDVGGQ-- 74
Query: 470 YDRLRPL 490
D++RPL
Sbjct: 75 -DKIRPL 80
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLL--ISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQE 466
K V+VGD VGK+ ++ ++ T+ + G + A+ +L L DT+G E
Sbjct: 15 KVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTASNSCHLYLLDTSGLE 74
Query: 467 DYDRLRPLSYPQTDSSLYVF 526
+Y L + D ++ F
Sbjct: 75 EYRELTKIYLKNLDCVVFTF 94
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 32.3 bits (70), Expect = 0.31
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 13/98 (13%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEY--IPTVFDNYSANVMVD-----------GKP 430
+K +VVG GKT LL + P + V D +S + G
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIGPT 726
Query: 431 INLGLWDTAGQEDYDRLRPLSYPQTDSSLYVFRWSTSL 544
I L WD AGQ Y + T S+LY+ W+ +L
Sbjct: 727 ITLSTWDLAGQSVYYAAHQMFL--TPSTLYLAVWNATL 762
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 410 VMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLYVF 526
V V GK + L +WDTAGQE + + Y +L V+
Sbjct: 137 VNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVY 175
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
++ ++VG A GKT +L IPT+ N + V+ K I+ +WD GQ
Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVES---VEYKNISFTVWDVGGQ-- 71
Query: 470 YDRLRPL---SYPQTDSSLYV 523
D++RPL + T +YV
Sbjct: 72 -DKIRPLWRHYFQNTQGLIYV 91
>SB_59786| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-19)
Length = 268
Score = 30.7 bits (66), Expect = 0.93
Identities = 26/97 (26%), Positives = 40/97 (41%)
Frame = -2
Query: 454 CIPEAQVDWLSIYHDIRRVIVEYCRYIFAGKSICSVTDEQTCFTDGTISNNNTLDCLHFC 275
C+ Q D + + D R + FA ++ Q T+++ N +DC C
Sbjct: 15 CVTSLQADQVFVSRDNRE-------FEFANFNLAENQAIQALHIIATVNSQNIVDCELDC 67
Query: 274 LLSNLCQKQNTTDAYTEQLVFSLLITLDNQNTSASQS 164
L ++ CQ N D + LL T + N SA QS
Sbjct: 68 LETDSCQSVNHKDGSCD-----LLDTTKHNNESALQS 99
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 281 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 388
+++++ VV+G VGK+ L + T F GEY T+
Sbjct: 14 VRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTL 49
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 30.7 bits (66), Expect = 0.93
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Frame = +2
Query: 275 AKMQAIKCVVVGDGAVGKTCL--LI----SYTTNAFP-GEYIPTVFDNYSANVMVDGKPI 433
A ++ ++ VVGD VGKT L LI S ++ A+ G + +Y M GK
Sbjct: 2 AAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEG-MPGGKTF 60
Query: 434 NLGLWDTAGQEDYDRLRPLSYPQTDSSLYVF----RWSTSLIRKRSGQVVSRS 580
L WD G +++ R + Y + + V R S + +RK +V++ S
Sbjct: 61 FLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVLNAS 113
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 567 WYPEVRHHCP 596
WYPEV HHCP
Sbjct: 576 WYPEVSHHCP 585
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
++ ++VG A GKT +L IPT+ N V+ K I+ +WD GQ
Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ-- 71
Query: 470 YDRLRPL 490
D++RPL
Sbjct: 72 -DKIRPL 77
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 422 GKPINLGLWDTAGQEDYDRLRPLSY 496
GK I L +WDTAGQE + + Y
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYY 26
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 340 EQTCFTDGTISNNNTLDCLHFCLLSNLCQKQNTTDAYTEQLVFSL-LITLDNQNTSASQS 164
++ CF +GT + C H + L Q T A T Q F+L LIT + S
Sbjct: 321 DEGCFVNGTNETHTICHCYHLTSFAVLMQHSPDTFAVTSQHQFALGLITYIGISISLLAL 380
Query: 163 TLVVL 149
+L +L
Sbjct: 381 SLALL 385
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT--VFDNYSANVMVD 421
+K V+ GD GKTC+ F +YIPT + ++ N ++D
Sbjct: 226 MKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPTNEIQEDDDGNAVLD 271
>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
Length = 948
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = -3
Query: 375 YSPGKAFVV*LMSRHVLPTAPSPTTTHLIAC--IFAFYPIFV---KNKTQRMLTQNNSFF 211
+SPGK F S H T + + C IF +Y IF ++ Q + QNN+F
Sbjct: 443 FSPGKCFYFQKSSNHQPSTLFAYVNVFIPMCVIIFCYYKIFNTIRSHQIQANIQQNNNFL 502
Query: 210 HYLLL*TIKIRR 175
+ IK+ R
Sbjct: 503 SRPNIQEIKVTR 514
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 388
K ++VGD VGKT + Y EY PT+
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 416 VDGKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLYVFRWSTSLIRKRSGQVVSRS 580
+ G + WD G DY+ +R Y QT L S +I + GQ +R+
Sbjct: 7 IHGVEYRINFWDFGGDPDYNEIRSELYGQTQIDLI----SRRVISSKEGQKWARA 57
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 293 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDN 397
K +V+GD VGKT L+ Y F Y TV N
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 422 GKPINLGLWDTAGQEDYDRLRPLSYPQTDSSLYVFRWSTSL 544
G I L WD AGQ Y + T S+LY+ W+ +L
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFL--TPSTLYLAVWNATL 41
>SB_24049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 379 YIFAGKSICSVTDEQTCFTDGTISNNNTLDCLHFCLLSNLC 257
Y+ A C + Q C DG S NT++C C + C
Sbjct: 66 YVKACAKRCDYNNVQMC-VDGKDSQGNTVNCTAHCCTGDYC 105
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 299 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDN-YSANVMVDGKPINLGLWDTAGQEDYD 475
V++G GKT +L N F EY+ TV ++ + K I +WD G+E
Sbjct: 25 VMLGLDKSGKTSILYR---NKFR-EYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNR 80
Query: 476 RLRPLSYPQTDSSLYV 523
L QTD+ +YV
Sbjct: 81 PLWKAYARQTDAVIYV 96
>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
Length = 808
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 327 LPTAPSPTTTHLIACIFAFYPI 262
LP PSPTTTH I + P+
Sbjct: 322 LPPTPSPTTTHAIPQAYVSTPV 343
>SB_13158| Best HMM Match : PAN (HMM E-Value=9.4e-06)
Length = 329
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 316 TISNNNTLDCLHFCLLSNLCQKQN 245
T N + +DC+ FC+L CQ N
Sbjct: 264 TEQNVSVVDCVMFCMLDGRCQSLN 287
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 443 LWDTAGQEDYDRLRPLSYPQTDSSLYVF 526
+WDTAGQE + L Y D + VF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVF 28
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,406,942
Number of Sequences: 59808
Number of extensions: 377936
Number of successful extensions: 1151
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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