Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20149
(567 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 130 6e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 127 7e-30
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 2e-28
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 97 1e-20
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 62 2e-10
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 60 1e-09
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 41 6e-04
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.0
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.6
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 6.1
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 27 8.1
SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 27 8.1
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 27 8.1
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 130 bits (315), Expect = 6e-31
Identities = 62/82 (75%), Positives = 68/82 (82%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD
Sbjct: 204 TFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRL 263
Query: 190 XXXCERAKRTLSSSTQASIEID 255
CERAKRTLSSSTQASIEID
Sbjct: 264 RTACERAKRTLSSSTQASIEID 285
Score = 116 bits (280), Expect = 1e-26
Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQIHDIVLVGGSTRI 428
SLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRI
Sbjct: 286 SLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRI 345
Query: 429 PRCRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDKSEEVQ 563
P+ + + + + ++GAAVQAAILHGDK + V+
Sbjct: 346 PKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVK 391
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 127 bits (306), Expect = 7e-30
Identities = 62/83 (74%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 TFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXX 186
TFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD
Sbjct: 204 TFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRR 263
Query: 187 XXXXCERAKRTLSSSTQASIEID 255
CERAKRTLSSST+ASIE+D
Sbjct: 264 LRTACERAKRTLSSSTEASIEVD 286
Score = 112 bits (270), Expect = 2e-25
Identities = 56/104 (53%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 434
SLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH++VLVGGSTR+P+
Sbjct: 287 SLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPK 346
Query: 435 CRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDKSEEVQ 563
+ + +S + ++GAAVQAAIL GDKS+EV+
Sbjct: 347 IQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVK 390
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 122 bits (294), Expect = 2e-28
Identities = 59/82 (71%), Positives = 65/82 (79%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD
Sbjct: 297 TFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRL 356
Query: 190 XXXCERAKRTLSSSTQASIEID 255
CERAKRTLSSSTQASIEID
Sbjct: 357 RTACERAKRTLSSSTQASIEID 378
Score = 115 bits (277), Expect = 2e-26
Identities = 58/105 (55%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIP 431
SL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIP
Sbjct: 379 SLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIP 438
Query: 432 RCRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDKSEEVQ 563
+ +S + + + ++GAAVQAAILHGDKSE Q
Sbjct: 439 KIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQ 483
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 96.7 bits (230), Expect = 1e-20
Identities = 52/116 (44%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +3
Query: 204 EGKEDLVIVHTSEH*DRSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 383
+ K L H + S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K
Sbjct: 966 KAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKK 1025
Query: 384 AQIHDIVLVGGSTRIPRCRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDK 548
++IH+IVLVGGSTRIP+ + K + + + ++GAAVQA +L G++
Sbjct: 1026 SEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGEE 1081
Score = 85.4 bits (202), Expect = 3e-17
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K+
Sbjct: 901 TFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKL 960
Query: 190 XXXCERAKRTLSSSTQASIEID 255
E+AKR LS+ QA +EI+
Sbjct: 961 RREVEKAKRALSTQHQARVEIE 982
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 77.4 bits (182), Expect = 8e-15
Identities = 41/101 (40%), Positives = 56/101 (55%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ D
Sbjct: 11 TFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRL 70
Query: 190 XXXCERAKRTLSSSTQASIEIDLSLRVLTSTRQLLVLASRS 312
E+AK LSSS Q I + + + L + SRS
Sbjct: 71 REAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRS 111
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = +3
Query: 288 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSSCKISLME 467
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+P+ + + +
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIFGR 167
Query: 468 RSSTNLLTLTRRSFGAAVQAAILHGD 545
S + + GAA+Q +L GD
Sbjct: 168 VPSKAVNPDEAVAIGAAIQGGVLAGD 193
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = +3
Query: 288 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSSCKISLME 467
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+P+ + + +
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIFGR 112
Query: 468 RSSTNLLTLTRRSFGAAVQAAILHGD 545
S + + GAA+Q +L GD
Sbjct: 113 VPSKAVNPDEAVAIGAAIQGGVLAGD 138
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = +3
Query: 255 SLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 425
SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++VLVGGSTR
Sbjct: 316 SLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTR 375
Query: 426 IPRCR 440
+P+ R
Sbjct: 376 VPKIR 380
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
T DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ +
Sbjct: 233 TLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQ-LTCSEDIQRL 291
Query: 190 XXXCERAKRTLSSSTQASIEIDL 258
E AK L+ + + +I++ L
Sbjct: 292 RQEVEAAKINLTRTNEVTIKLML 314
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +2
Query: 428 PKVQKLLQDFFNGKELNKSINPDEA 502
PK+++L+Q+FF+GK N +I+P+ A
Sbjct: 377 PKIRQLIQEFFDGKPPNVAIDPELA 401
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +1
Query: 4 HETFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXX 183
H + V I G +V STA + +LGG DFD +V HF QEFK KYK D
Sbjct: 262 HSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKI 321
Query: 184 XXXXXCERAKRTLSSST 234
CE+ K+ +S++T
Sbjct: 322 KLGAECEKLKKLMSANT 338
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 264 EGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 404
E D + + RA+FEEL ADL + P+ +L A+ K + ++V
Sbjct: 350 EDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 258 LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRC 437
+F+G DF +TR EE+ DLF PV ++L+ A M I +VLVGG R+P+
Sbjct: 271 VFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIRVPKV 330
Query: 438 RSS 446
+ +
Sbjct: 331 QDA 333
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 55 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 150
+K D LGG D R+ +H VQ FK+ YK
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 16 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKKDXXXXXXXX 180
DV++L++ +G+++V +T D LGG +FD +++ +FKR K+K D
Sbjct: 167 DVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSK 226
Query: 181 XXXXXXCERAKRTLSSSTQASIEID 255
E+ K LS+ A+ +D
Sbjct: 227 TKLQTSAEQCKNILSTLESANCSVD 251
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 34.7 bits (76), Expect = 0.053
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 428 PKVQKLLQDFFNGKELNKSINPDE 499
PK+Q+LL+++F GKE+ + I+PDE
Sbjct: 53 PKIQQLLKNYFVGKEICRRISPDE 76
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 375 MDKAQIHDIVLVGGSTRIPRCRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDKS 551
+ ++ + ++LVGG+TR P+ + K + + ++ ++GAAVQA+IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 552 EEV 560
++
Sbjct: 95 ADM 97
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 120 LCPGVQEEIQKGPRYQXESS*AFAYCM*EGK 212
LCP ++ + GP ++ E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 62 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 178
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 111 GQPLCPGVQEEIQKGPRYQXESS*AFAYCM 200
G LCP ++ + GP ++ E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 120 LCPGVQEEIQKGPRYQXESS*AFAYCM*EGK--EDLVIVHTSEH*DRSLFE 266
LCP ++ GP ++ E S AFA C+ GK E + T+E LFE
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGKILERFDKLATTECTKEDLFE 256
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 383 GSNPRYCTGGWLHSYPKVQKLLQDFFNGKELNKSINPDEA*LWCS 517
G+ Y G +YP + + D N E+N INPD + W S
Sbjct: 767 GNTTSYSNGYQSSAYPLINQT--DNMNNTEMNNMINPDNSSSWNS 809
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 14 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 178
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 387 QIHDIVLVGGSTRIPRCRSSCKISLMERSSTNLLTLTRRSFGAAVQAAIL 536
+I + +VGGSTRIP + K + T + + G A+Q A+L
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVFGKELMTTMNADEAVARGCALQCAML 55
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 431 WDTSGATHQYNIVDLSLIHLG 369
WD+SG T + N++ LSL +G
Sbjct: 3103 WDSSGETIKSNVISLSLTDMG 3123
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 120 LCPGVQEEIQKGPRYQXESS*AFAYCM 200
LCP ++ + GP ++ E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +1
Query: 67 AGDTHLGGEDFD---NRMVNHFVQEF 135
AGD +GGEDFD +V+ F++ F
Sbjct: 19 AGDNDIGGEDFDVMSKSVVSRFIRHF 44
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 120 LCPGVQEEIQKGPRYQXESS*AFAYCM 200
LCP ++ + GP ++ E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 52 EVKSTAGDTHLGGEDFDNRMVNHFVQEFK 138
EVK T+GD + E DN + H ++ FK
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFK 49
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = +3
Query: 282 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 413
T ++ARF++ DL T++P+ ++++ D + +++ G
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETG 219
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,981,422
Number of Sequences: 59808
Number of extensions: 428057
Number of successful extensions: 3850
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3832
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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