Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20138
(682 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 1e-49
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 5e-30
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 86 3e-17
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 81 1e-15
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 69 3e-12
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 68 6e-12
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 47 1e-05
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 1e-05
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 42 3e-04
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 42 5e-04
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 41 8e-04
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 40 0.002
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 39 0.003
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 39 0.004
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 38 0.008
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 38 0.008
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 37 0.013
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 37 0.013
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 37 0.013
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 37 0.013
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 37 0.017
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 36 0.030
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 36 0.030
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 36 0.030
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 36 0.040
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 36 0.040
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 36 0.040
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.070
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 35 0.070
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 35 0.070
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 34 0.12
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 34 0.12
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 33 0.16
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 33 0.21
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.21
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 32 0.37
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 32 0.37
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 31 1.1
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 1.5
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 30 2.0
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 29 2.6
SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5) 29 3.5
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_45874| Best HMM Match : TIR (HMM E-Value=0.43) 29 3.5
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 29 3.5
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 29 4.6
SB_33077| Best HMM Match : R3H (HMM E-Value=0.38) 29 4.6
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_55623| Best HMM Match : ResIII (HMM E-Value=0.17) 28 8.0
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_33930| Best HMM Match : Ligase_CoA (HMM E-Value=0) 28 8.0
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 28 8.0
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 193 bits (470), Expect = 1e-49
Identities = 97/132 (73%), Positives = 106/132 (80%), Gaps = 2/132 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL
Sbjct: 5986 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 6045
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLC--QKQGSVREVFETATRAALQ 610
R D T EL+KMKQEPVK ++ G D + + C + + VREVFETATRAALQ
Sbjct: 6046 RMDENTKRELQKMKQEPVKIEE-GRAMADKISAYAYLECSAKTKDGVREVFETATRAALQ 6104
Query: 611 VKKKKKTRCSLL 646
KKKKK +C LL
Sbjct: 6105 TKKKKKGKCVLL 6116
Score = 125 bits (301), Expect = 4e-29
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 75 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN VADIEVDGKQVELALWDT
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 5984
Query: 255 LAKK 266
++
Sbjct: 5985 AGQE 5988
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 128 bits (308), Expect = 5e-30
Identities = 65/133 (48%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H CP P +LVG + DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAALQ 610
R+D TI +L K KQ+P+ + A ++ R + + C Q ++ VF+ A AAL+
Sbjct: 120 RDDQGTIEKLSKNKQKPIAVEAAEKLARELR-AVKYVECSALTQKGLKNVFDEAILAALE 178
Query: 611 -VKKKKKTRCSLL 646
+ +KK +C LL
Sbjct: 179 PPEPQKKKKCRLL 191
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+N + + G+ L L+DT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CF + S S ENI KW PE+ H P P ILVGNK+DL
Sbjct: 62 GQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDL 121
Query: 437 RNDPATINELRKMKQEPV 490
R+ + ++P+
Sbjct: 122 RSAQQNTSLSNHRSRDPI 139
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
KLV+VGDG GK+ LI + + FP Y+PTVF+N ++I +DGK + LWDT ++
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQE 64
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 92.7 bits (220), Expect = 2e-19
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQED+D LRPL Y DV ++CFSV SP S N+ KW PE++ F P PIILVG DL
Sbjct: 75 GQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDL 134
Query: 437 RNDPATINELRKMKQEPVKPQKA-GYG*KD*RVCISGMLCQKQGSVREVFETA 592
++ + EL + +P+ +KA G K VC Q +++ VF+ A
Sbjct: 135 KDCYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVFDEA 187
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K VIVGDG GKT LL+ + D FP YVPT F+ +EV+ K + DT ++
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQE 77
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G ED+DRLRPL YP+TD+ L+CF + S EN+ +W PE+ HF P VP +LVGNKKDL
Sbjct: 64 GGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDL 123
Query: 437 R--NDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAAL- 607
R D + + + E K +A K + S +L + +V+EV T+ R A
Sbjct: 124 RPKQDQEDSHSIDFVSYEEGK--EAAQNFKMQYIENSALLNE---NVKEVITTSIRIARD 178
Query: 608 QVKKKKKTRCSLL 646
+ KK K +C ++
Sbjct: 179 NLPKKGKRKCHVM 191
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VAD-IEVDGKQVELALWDT 254
KL IVGDGA GKT L I + + FP Y+PT ++ D VDG + + L+D+
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDS 62
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G EDYD +RPLSY + D++L+CF + P + ++I EKW EV CPN P++LVG K+DL
Sbjct: 289 GHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDL 348
Query: 437 RNDPATINEL-RKMKQEPV 490
R++ +++L K+ Q+PV
Sbjct: 349 RSEVNIVSKLASKVCQQPV 367
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +3
Query: 72 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWD 251
P IR +++VGD CGKT LL + ++QF E Y TVF + +EVDG+++EL LWD
Sbjct: 227 PNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWD 286
Query: 252 T 254
T
Sbjct: 287 T 287
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 80.6 bits (190), Expect = 1e-15
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +2
Query: 266 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 445
D +LRPL Y DTDV ++CF + +P S +N+ W PE+KH+ P P+++VGNKKD+R +
Sbjct: 81 DLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPVLVVGNKKDMRTN 140
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +3
Query: 87 RKKLVIVGDGACGKTCLLI-VFSKDQFP-EVY------VPTVFEN*VADIEVDGKQVELA 242
R KL +VGD GKTC+L F + Q P +VY +P V E+ + D +
Sbjct: 8 RLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVT 67
Query: 243 LWDT 254
WDT
Sbjct: 68 YWDT 71
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 69.3 bits (162), Expect = 3e-12
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Frame = +2
Query: 260 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG---NKK 430
Q YD+LR YPDTDV L+CFSV SL+++ +W PE++ FCP P +L+G N +
Sbjct: 125 QTAYDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRWVPELRRFCPVTPFLLIGTHINWR 184
Query: 431 DLRND-PATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAAL 607
L D ATI+ R+ P+ P+ M +K G+VR E AT A
Sbjct: 185 LLSEDRAATIDPARR----PIFPE------------TGAMYAEKHGAVR-YMECATNDAT 227
Query: 608 QVK 616
VK
Sbjct: 228 AVK 230
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 68.1 bits (159), Expect = 6e-12
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G +YDRLRPL+Y +D+IL+CF + + + E I KW PE P +L+GNK D+
Sbjct: 61 GTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDI 120
Query: 437 R 439
R
Sbjct: 121 R 121
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWD 251
MA+ RK K+V+ GD GKT LI ++++ PT F N +EV ++ L LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELGLEVGSQKFLLDLWD 58
Query: 252 T 254
T
Sbjct: 59 T 59
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 65.3 bits (152), Expect = 4e-11
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +2
Query: 266 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 442
D+ R +Y + VI++CF++++P S +++ W PE+K +CP VPIILVG K D R+
Sbjct: 93 DHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPEIKKYCPRVPIILVGTKSDWRS 151
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 293 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 445
+ DTDV +CFSV DS ++ KW EVK+ PN PII+VG K DLR +
Sbjct: 86 FSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDLREN 136
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLL--IVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWD 251
++VI+GD GKTCLL + + + ++ ++ N VA+I VDGK +L L D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCD 74
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 57.6 bits (133), Expect = 9e-09
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 368 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPV 490
W PEV H CPN PI+LVG K DLR+D TI++L++ K P+
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPI 616
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 427
G D +RPL+Y D+ ++CF V + S EN+ KW PE++ + VP++LVG K
Sbjct: 82 GSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+++VGD GKTCL+ F+K FP PT+ + + ++VDG++V+L +WDT ++
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQE 67
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GK+ LL+ F+ D F Y+ T+ + + + VDGK ++L +WDT ++
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Score = 34.3 bits (75), Expect = 0.093
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKD 433
GQE + L Y I++ + V+ ++ ++ + W EV + C V ILVGNK D
Sbjct: 66 GQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTILVGNKCD 124
Query: 434 L 436
L
Sbjct: 125 L 125
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G E+Y+ L Y ++ V+L+ +S+D PDSL + E T + P I+LV NK DL
Sbjct: 8 GMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE-CTQSAQVNAPAAKIVLVANKMDL 66
Query: 437 RNDPATINELRKMKQEP 487
N +LR + P
Sbjct: 67 PNYRRLETDLRVKEMFP 83
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G E+Y+ L Y ++ V+L+ +S+D PDSL + E T + P I+LV NK DL
Sbjct: 67 GMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE-CTQSAQVNAPAAKIVLVANKMDL 125
Query: 437 RNDPATINELRKMKQEP 487
N +LR + P
Sbjct: 126 PNYRRLETDLRVKEMFP 142
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFP--EVYVPTVFEN*VADIEVDGKQVELALWDTL 257
K+ + G GKT + S D+FP E + + + + + + K++++ LWDTL
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTL 66
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQE + LR Y ++ F V S + +N+P W +++ C N+PI+L GNK D+
Sbjct: 90 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLERVCENIPIVLCGNKVDI 148
Query: 437 RN 442
++
Sbjct: 149 KD 150
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 308 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 439
V L+CF + + +S NI W P V +VP +LVGNK +LR
Sbjct: 83 VFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELR 126
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+V VGD GKT L + FP ++ ++F+ +E+DGK+ + L DT
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDT 64
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K++IVG+ GK+ LL+ F+ D F P++ + V + V+G + +LA+WDT ++
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 368 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 487
W PE+K CP VP +L+G K DLR D A + EP
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEP 40
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K++I+GD GKTCL +FPE T+ + +E++G+ V+L LWDT ++
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 293 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKH--FCPNVPIILVGNKKDL 436
Y + + ++ + + S E + W E +H + +VP IL+GNK DL
Sbjct: 117 YRNVNAVVFMYDITRKCSFEALTT-WIVEYRHHAYSGDVPKILIGNKCDL 165
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+G+ A GKT L ++ D F +V TV + V + + K+V+L +WDT ++
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQE 81
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K++++GD GK+ L+ F D+F T+ + + D ++DGK+V+L LWDT ++
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 PESSGPMAAI-RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQV 233
PE S A R KL +VGD GKT LL K EV +FE V D+ +
Sbjct: 50 PEQSDTHATSERYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDVTSGDSNL 108
Query: 234 ELALWDT 254
E LWD+
Sbjct: 109 EFMLWDS 115
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+V++G G GK+ L + F QF E Y PT+ + +IEVD L + DT
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDT 58
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 263 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEK 367
E+Y+ +R Y DTDV L+CF + +P SL+++ +K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 433
GQE + + Y T +++ + V S D+ N+ ++W E+ C +V ILVGNK D
Sbjct: 35 GQERFRTITSTYYRGTHGVIVVYDVTSADTFVNV-KRWLHEIDQNCDDVIRILVGNKDD 92
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V++GD GK+ LL F++++F T+ E I+V+GK ++ +WDT ++
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Score = 34.3 bits (75), Expect = 0.093
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE Y + Y ++ + + + +++ E+W EV+ H P + ++LVGNK D
Sbjct: 70 GQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDV-ERWLLEVREHADPTIVVMLVGNKCD 128
Query: 434 LRN 442
L++
Sbjct: 129 LKH 131
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+ I+G G GKT LL F +F E +VPTV + + + +DG + DT
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDT 67
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 433
GQE + + Y + D +++ F + + + +IP+ W V+ + N+ +LVGNK D
Sbjct: 69 GQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQ-WLMNVQKYTNKNILKVLVGNKTD 127
Query: 434 LRNDPATIN 460
L+ +N
Sbjct: 128 LKGASRKVN 136
Score = 34.3 bits (75), Expect = 0.093
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+++VGD GKT L+ F+K F + TV + +++ G +V+L WDT ++
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 188
KL+++GD GKTC+L FS D F ++ T+
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 212 RSGWKTSGTGSVGYPGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF 391
+ G S T + GQE+Y +R + L F+V++ S E+I ++ ++K
Sbjct: 271 KGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI-NQYREQIKRV 329
Query: 392 --CPNVPIILVGNKKDLRNDPATINELRKM 475
VP++LVGNK DL + ++ +++
Sbjct: 330 KDAEEVPMVLVGNKCDLPQRTVSTSDAQEL 359
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K+V++GD GK+ LL ++K++F T+ E ++E++GK V +WDT
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-----NVPIILVG 421
GQE + LR Y +D+ L+ ++VD S N+ W E ++ N P IL+G
Sbjct: 269 GQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNL-SMWKKEFLYYADVRDQDNFPFILLG 327
Query: 422 NKKDL 436
NK D+
Sbjct: 328 NKVDV 332
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 111 DGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
DG GK+ L+ F +F T+ E D+++DG+ L +WDT ++
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQE 271
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKD 433
GQE + + Y I++ + V +S N+ ++W E+ + C NV +LVGNK D
Sbjct: 87 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYACENVNKLLVGNKCD 145
Query: 434 L 436
L
Sbjct: 146 L 146
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 22/80 (27%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFS---------------------KDQFPEVYVPTV-FEN*VA 206
KL+++GD GK+CLL+ F+ D + E Y+ T+ + +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 207 DIEVDGKQVELALWDTLAKK 266
IE+DGK ++L +WDT ++
Sbjct: 70 TIELDGKTIKLQIWDTAGQE 89
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
KLV+VG G GK+ L I F + F Y PT+ ++ +D + L + DT ++
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQE 70
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE++ +R + L+ FSV S E I + + ++ P+I+ GNK D
Sbjct: 68 GQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSD 127
Query: 434 L 436
L
Sbjct: 128 L 128
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKD 433
GQE Y L P+ Y ++ + + + D+ + W E+ + PN+ I L GNK D
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFARA-KTWVKELQRQASPNIVIALSGNKAD 137
Query: 434 L 436
L
Sbjct: 138 L 138
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VAD-IEVDGKQVELALWDTLAKK 266
KLV++G+ A GK+ L++ F K QF E T+ + + +D V+ +WDT ++
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKD 433
GQE + + Y + +++ + + D+ +N+ +W +V+ + P I +LVGNKKD
Sbjct: 104 GQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVI-RWGEDVQKYAPENAIKLLVGNKKD 162
Query: 434 LRND 445
L +
Sbjct: 163 LERE 166
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 57 PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGK-Q 230
P P + +++++GD GK+ LL F++ QF E PTV + V +E+ G +
Sbjct: 3 PARMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVR 62
Query: 231 VELALWDTLAKK 266
++L +WDT ++
Sbjct: 63 IKLQIWDTAGQE 74
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 433
GQE + + Y L+ + + S ++ ++ W + + PN+ IILVGNKKD
Sbjct: 153 GQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTN-WLTDARTLASPNIVIILVGNKKD 211
Query: 434 LRND-PATINELRKMKQE 484
L D T E + QE
Sbjct: 212 LDADREVTFLEASRFAQE 229
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V +GD GK+ L F D F E Y PT+ + + +D +V L +WDT ++
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQE 223
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 194 ELSCRHRSGWKTSGTGSVGYPGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWT 373
EL RS ++ S GQE + + Y +++ + + +S N+ KW
Sbjct: 356 ELPDYDRSRFQNKNDESGWEAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL-HKWL 414
Query: 374 PEVKHFCPN-VPIILVGNKKDLRND 445
EV+ + V +ILVGNK DL D
Sbjct: 415 MEVETYASEGVHMILVGNKIDLDTD 439
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 433
GQE + + + D +L+ + V S ++ + W ++ C VPI+L GNK D
Sbjct: 500 GQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRD-WVEAIEESCSKPVPIMLCGNKID 558
Query: 434 LRNDPATINE 463
+R A N+
Sbjct: 559 IRQSAAAENK 568
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V+ GD A GK+ ++ +++F T+ + + + VDGK L LWDT ++
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V +GD GK+ L F DQ+ + T+ + + + V+G+ + + LWDT ++
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQE 956
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAK 263
++ ++GD GKT LL+ F +F Y PT+ + I +D V L + DT ++
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASR 63
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 90 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
+K+ ++G + GK+ L I F + QF + Y PT+ +I+ G++ L L DT
Sbjct: 7 RKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDT 61
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 284 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 433
PL Y ++ F V S E +P W +V+ C + +P++LVGNK D
Sbjct: 40 PLIYRALSGAVIVFDVTDRKSFERVPT-WLDKVQEHCGHEIPVVLVGNKTD 89
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 34.7 bits (76), Expect = 0.070
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-----HFCPNVPIILVG 421
GQE + + + Y D ++ F ++ +L+ KW ++ H VP ILVG
Sbjct: 77 GQERFSSMTRVYYKGADACVVLFDLERQTTLDGAI-KWKKDLDSKYKLHSRKPVPCILVG 135
Query: 422 NKKDLRNDPATINELRKMKQE 484
NK DL + P + K+ +E
Sbjct: 136 NKSDLPDRPVDKEIIDKLCKE 156
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 34.7 bits (76), Expect = 0.070
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G + ++ L+ + D ++ +SVD SL+ E V VP++LVGNK DL
Sbjct: 165 GSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 188
++V++G G GKT L+ F F E Y PTV
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTV 140
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+ I+G A GKT L+ K F ++PT+ + + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 314 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 442
L+ + + + EN+ E+W E++ H N+ I+LVGNK DLR+
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 52
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 188
K+V++G G GK+ L + F QF E Y PT+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCP----NVPIILVG 421
GQE + L Y D ++ F V P+S + + + W E + P N P +++G
Sbjct: 6 GQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTL-DSWRDEFLIQASPRDPENFPFVVLG 64
Query: 422 NKKDLRN 442
NK DL N
Sbjct: 65 NKIDLEN 71
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+VI+G+ GK+ L + F +F Y T+ D EV G+ V + L DT
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDT 916
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 75 MAAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTV 188
M +R K+++ GD GK+ L+ VF D +P+ Y TV
Sbjct: 1 MVVLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 78 AAIRKKLVI--VGDGACGKTCLLIVFSKDQFPEVYVPTVFE 194
+A KKL I +G+G GK+ L+ F + F E YVPT+ E
Sbjct: 22 SAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEE 62
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 260 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDL 436
QE Y + Y ++ + + S N+ KW E++ H ++ IIL+GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDL 60
Query: 437 RN 442
++
Sbjct: 61 KH 62
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 260 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDL 436
QE Y + Y ++ + + S N+ KW E++ H ++ IIL+GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDL 60
Query: 437 RN 442
++
Sbjct: 61 KH 62
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K+V++G+ GKT L ++ F T+ ++ +++ KQV L++WDT
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDT 67
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 185
K+VI GD GKTC+ F E Y+PT
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/81 (24%), Positives = 41/81 (50%)
Frame = +3
Query: 12 RLKKVSIKPIFRRN*PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF 191
+++K+S + + + P+ S + R +V G + GKT L++ F F + Y PT+
Sbjct: 4 KIQKISQQRELQSSSPKDS-ETSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE 62
Query: 192 EN*VADIEVDGKQVELALWDT 254
+ + + + + EL + DT
Sbjct: 63 DFFIKHVFFNNETYELQIIDT 83
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FE---------N*VADIEVDGKQVE 236
K + +GD GKT LL ++ F +VPT+ F N + G+++
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 237 LALWDTLAKK 266
L LWDT ++
Sbjct: 168 LQLWDTAGQE 177
>SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5)
Length = 144
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 75 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQ---VELAL 245
MAA + + +VG G G T L + +D P V V + ++ D DG + L
Sbjct: 1 MAASARSVAVVGCGCIGITAALSILERD--PCVRVTIISDSFSPDNTTDGAAGILLPFVL 58
Query: 246 WDT 254
WDT
Sbjct: 59 WDT 61
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 311 ILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 445
IL+ + + + DS ++I + W ++ + PNV +L+GNK D ++
Sbjct: 5 ILLVYDITTEDSFKHISQ-WLQNIEDNASPNVCKVLLGNKLDAEDE 49
>SB_45874| Best HMM Match : TIR (HMM E-Value=0.43)
Length = 876
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 422 NKKDLRNDPATINELRKMKQEPVKP-QKAGYG 514
NKK L D AT+N LR +KQ K QKA G
Sbjct: 646 NKKILCKDKATVNLLRNLKQSGHKEVQKAAVG 677
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 236 TGSVGYPGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIIL 415
T S+ G+E Y L ++ + + SL+ + ++ ++ PN +++
Sbjct: 274 TISMDTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVI 333
Query: 416 VGNKKDL-RNDPATINELRKMKQEPVK 493
VG KKDL +D I E M+ V+
Sbjct: 334 VGCKKDLVTDDTREITEAAGMELAKVQ 360
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 236 FHLFSIHFDVGNLILKHCRHVYFRELIL--AEHYQQTCFTACTVTDDY*LFAYR 81
FHL +H +V + RH++ R ++ A + C TA +T D LF+ R
Sbjct: 286 FHLVGMHSNVFTRTARLPRHLFHRRKVIEFALWIRDCCITAALLTRDGCLFSAR 339
>SB_33077| Best HMM Match : R3H (HMM E-Value=0.38)
Length = 332
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 422 NKKDLRNDPATINELRKMKQEPVKPQKAGYG 514
NK+DLR+ T+N++RK K+ +P + G G
Sbjct: 296 NKRDLRSIEETLNDIRKRKRH--RPNEDGEG 324
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 96 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
LV++G GK+ LL+ F +F Y PT+ +D L + DT
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDT 182
>SB_55623| Best HMM Match : ResIII (HMM E-Value=0.17)
Length = 755
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 57 PESSGPMAAIRKKLVIVGDGACGKT 131
P+ SG +AA K+ + G G GKT
Sbjct: 319 PKKSGSLAATSAKMYLAGQGGSGKT 343
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 87 RKKLVIVGDGACGKTCLLIVFSK 155
+K LV+ GD CGKT L+ + +K
Sbjct: 383 QKPLVLYGDSGCGKTSLVAMTAK 405
>SB_33930| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 755
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 397 GAEVLYLRGPL--LWDVLERIRRVHREAHEDHIRIWIRERPQPIVIFLARVSHRASST 230
GAE+LY P+ ++ E R++R+ +DH W R P+ ++ R S S+
Sbjct: 399 GAELLYAGMPITEVFKAPEVCMRLYRDVSDDHRGSWSRNSSPPLT-YVGRGSKEFESS 455
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +2
Query: 401 VPIILVGNKKDLR 439
+PI+LVGNK+DLR
Sbjct: 71 IPIVLVGNKRDLR 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,769,339
Number of Sequences: 59808
Number of extensions: 481211
Number of successful extensions: 1340
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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