Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20119
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46216| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 33 0.26
SB_44683| Best HMM Match : Peptidase_S41 (HMM E-Value=3e-07) 31 0.61
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 31 0.61
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 31 1.1
SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34) 30 1.9
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_47658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 29 4.3
SB_18052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_32531| Best HMM Match : DUF827 (HMM E-Value=0.54) 29 4.3
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 28 5.7
SB_13335| Best HMM Match : DUF1279 (HMM E-Value=0.43) 28 5.7
SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 5.7
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 28 5.7
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58137| Best HMM Match : DUF536 (HMM E-Value=2.8) 28 7.5
SB_56849| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 28 7.5
SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_31513| Best HMM Match : Transgly_assoc (HMM E-Value=0.49) 28 7.5
SB_15124| Best HMM Match : E-MAP-115 (HMM E-Value=1.6) 28 7.5
SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9) 28 7.5
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_1335| Best HMM Match : E-MAP-115 (HMM E-Value=1.6) 28 7.5
SB_58755| Best HMM Match : DUF536 (HMM E-Value=2.8) 28 7.5
SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63) 28 7.5
SB_35145| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_34762| Best HMM Match : IncA (HMM E-Value=1.1) 28 7.5
SB_31662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_19764| Best HMM Match : E-MAP-115 (HMM E-Value=0.62) 28 7.5
SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44) 28 7.5
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 7.5
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 27 9.9
>SB_46216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +3
Query: 330 IKNA-ELPPINSWNGSATNTGPKGVIEDWRRFKQLEAENRAELEKERIALSKKLTLSVKT 506
+ NA LPP + TGPKGVI+D+RR+KQLE E++ E E+E AL+KK +LS +T
Sbjct: 34 VDNAGSLPP--NMRLQTPKTGPKGVIQDFRRYKQLETEHKKEQEEELKALAKKFSLSCQT 91
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 202 MTTLDDKILGEKVHNYCRAAKMTG 273
MTTLDD++LGEK NY +++ G
Sbjct: 1 MTTLDDRLLGEKRQNYVSSSESEG 24
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 455 RKRTYCIVQKT-DTFSQNRREEAQDKKIEEIEDEFNELI 568
R + C+ +KT + + RR+E +KKIEE+E NEL+
Sbjct: 580 RALSICLEEKTRNLHEEKRRKEELEKKIEEMETSKNELL 618
>SB_44683| Best HMM Match : Peptidase_S41 (HMM E-Value=3e-07)
Length = 263
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 500 QNRREEAQDKKIEEIEDEFNELIDEEFLQQYQ-KQRLQE 613
Q E+ QD++I + + EF +LI EE + +YQ K+ L E
Sbjct: 197 QTALEKNQDQEITKYKGEFTKLIQEELITRYQYKEGLYE 235
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 461 RTYCIVQKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
RT+ V +T+ S ++ + +KK+ ++ + EL E+ +Q + L+E ++Q EK
Sbjct: 2566 RTHVEVIRTENVSSSKDKNFIEKKLTNLQTAYEELRLEKTSKQNEVDDLREKLSQIEK 2623
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 455 RKRTYCIVQKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQE 613
RK YC + T T + RREE +++ EE E+E E +EE ++ +++ +E
Sbjct: 112 RKLYYCNL--TITIKRRRREEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEE 162
>SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 313
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 473 IVQKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
I Q+T S++RR+EA+++ EE E +EL E + QK + + A F+K
Sbjct: 131 IQQRTQNESKSRRQEARERN-EERLSEIDELERENREHENQKPLRERMKAIFKK 183
>SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34)
Length = 405
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 446 C*IRKRTYCIVQKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQ 601
C + K+ + ++ T T +NRR+E D+ E+ ED+ +++ DE Y K+
Sbjct: 112 CLLSKKEWIELETTSTKIKNRRQEGSDQ--EDSEDDDSDIDDELAGYLYDKK 161
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 503 NRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
++ +E KK +E+ED +L+ +E + K+RLQE++ EK
Sbjct: 182 SKTQENLMKKAKELEDLQQKLLKQEDTAKQDKRRLQEVILTKEK 225
>SB_47658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 497 SQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
S++RR+EA+++ E + E +EL E +YQK + + A F+K
Sbjct: 175 SESRRQEARERNEERLS-EIDELERENRELEYQKPLRERITAIFKK 219
>SB_41373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 497 SQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
S++RR+EA+++ E + E +EL E +YQK + + A F+K
Sbjct: 175 SESRRQEARERNEERLS-EIDELERENRELEYQKPLRERITAIFKK 219
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 500 QNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQE 613
Q R+EE + KK +E E + E +++ Q +KQRL E
Sbjct: 636 QRRKEEEEQKKRDEEERKRREKEEKDRQFQLEKQRLAE 673
>SB_18052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 324 KEIKNAELPPINSWNGSATNTGPK 395
+E+ ++LPP+ SWN GP+
Sbjct: 30 REVTESQLPPLRSWNSQQLAWGPE 53
>SB_32531| Best HMM Match : DUF827 (HMM E-Value=0.54)
Length = 341
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 488 DTFSQNRREEAQDKKIEEIED-EFNELIDEEFLQQYQKQRLQ 610
D+ S E +D +EE E+ E + + +EF +++QK ++Q
Sbjct: 75 DSISHGWPERRKDAMLEEEEEREIEQRVQKEFKEEFQKIKMQ 116
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDE 574
Q T ++++++A D+KIEE EDE +EL+D+
Sbjct: 1798 QSRITELEHKKKKA-DEKIEEQEDEIHELLDK 1828
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 348 PPINSWNGSATNTGPKGVIEDWRRFKQLEAENRAELEKER 467
PP+N W+ A N +++ +R + E + R LEKER
Sbjct: 549 PPVNVWDLEANNKSKVQSLQEIQRIE--EEKERKTLEKER 586
>SB_13335| Best HMM Match : DUF1279 (HMM E-Value=0.43)
Length = 319
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 497 SQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
S++RR+EA+++ E + E +EL E + QKQ + + A F+K
Sbjct: 178 SESRRQEARERNEERLS-EIDELERENRELENQKQLRERIKAIFKK 222
>SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3889
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 369 GSATNTGPKGVIEDWRRFKQLEAENRAELEKERIA 473
G +GPK VIE +R K+L + +EK+R A
Sbjct: 414 GEPALSGPKAVIERAKRLKRLLEQEVVYVEKQRAA 448
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 488 DTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEKVPK 643
D N+R + ++++ EDE N L ++ +Q+ +K R+ EL + F+ K
Sbjct: 590 DLLEANKRAADAEDELQQTEDELNRLKND--IQEKEK-RISELESAFDAADK 638
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +2
Query: 536 EEIEDEFNELIDEEFLQQYQKQRLQELMAQF 628
E IE+E N+L+D++F+Q+ + + + ++
Sbjct: 899 EVIEEEINKLVDQKFIQEIPSEEIDHSIPEW 929
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 485 TDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
T+T +R +A +K+ E E + NEL+++ K +LQE +K
Sbjct: 334 TNTAELEQRIQALEKEAAETEQKLNELMEKYDFTLGDKNKLQEDFESMKK 383
>SB_58137| Best HMM Match : DUF536 (HMM E-Value=2.8)
Length = 139
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 17 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 68
>SB_56849| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 155
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 65 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 116
>SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 270 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 321
>SB_31513| Best HMM Match : Transgly_assoc (HMM E-Value=0.49)
Length = 340
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 187 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 238
>SB_15124| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
Length = 175
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 81 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 132
>SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9)
Length = 335
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 270 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 321
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 500 QNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEKVPKF 646
+ R EE + KK+E+ + E + + +Q Q+QR + E P+F
Sbjct: 216 KRREEEEKRKKVEKEKQEREKAAKKNIKRQQQQQRTDQQQYPREIPPRF 264
>SB_1335| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
Length = 182
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 114 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEEKMSLKDRV 165
>SB_58755| Best HMM Match : DUF536 (HMM E-Value=2.8)
Length = 267
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 7 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 58
>SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63)
Length = 936
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 825 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 876
>SB_35145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 7 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 58
>SB_34762| Best HMM Match : IncA (HMM E-Value=1.1)
Length = 288
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 7 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 58
>SB_31662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 187 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 238
>SB_19764| Best HMM Match : E-MAP-115 (HMM E-Value=0.62)
Length = 317
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 89 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 140
>SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44)
Length = 532
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 479 QKTDTFSQNRREEAQDKKIEEIEDEFNELIDEEFLQ-QYQKQRLQELMAQFEKV 637
++++T +Q R A D+K EE+ E N +IDE + Q +++ L+E M+ ++V
Sbjct: 379 ERSETTNQERLR-AIDRKNEEL-SERNSVIDETLEENQLERENLEERMSLKDRV 430
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +2
Query: 497 SQNRREEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQELMAQFEK 634
++ R++E ++KK +EI+DE +L +E + QK+ ++ + EK
Sbjct: 610 AEERKKEIENKK-KEIDDEMRKLEEERTERDRQKEEERKRREEEEK 654
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 321 NKEIKNAELPPINSWN-GSATNTGP----KGVIEDWRRFKQLEAENRAELEKERIALSKK 485
NK +K L N+ N G A +T P KGV+E ++ ++ + RA K+ SKK
Sbjct: 199 NKLLKVLSLANGNAGNIGKANSTSPVKGLKGVLEKIKQARKASKKKRARARKKHNKTSKK 258
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,016,587
Number of Sequences: 59808
Number of extensions: 280087
Number of successful extensions: 1226
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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