Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20081
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 75 6e-14
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 72 5e-13
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 58 8e-09
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 52 4e-07
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 51 7e-07
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 48 5e-06
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 48 5e-06
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 48 5e-06
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 47 1e-05
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 46 2e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 3e-05
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 45 6e-05
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 44 1e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 42 3e-04
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 42 6e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 42 6e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 41 0.001
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 41 0.001
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 40 0.001
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 40 0.002
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 39 0.004
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.009
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 37 0.012
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 37 0.016
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 35 0.048
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 35 0.048
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 34 0.11
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.15
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 33 0.19
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 33 0.19
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.19
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 0.59
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.78
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 31 0.78
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 1.0
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 30 1.4
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 30 1.8
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.4
SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.2
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_19883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_7579| Best HMM Match : HEAT (HMM E-Value=0.0096) 27 9.7
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSE-FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 431
FVGGL E SD++IR +F + + + E+E + + N+R+GFCF++F+SE V+ + +T
Sbjct: 106 FVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQ 165
Query: 432 KRTIGGKEVDVKRATPK 482
I G +V+VKRA PK
Sbjct: 166 FHNIEGNKVEVKRALPK 182
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 177
R +K+FVGGL ET+D+++R++FG AY ++ I T+ ++ R RGF F+ F + +++DK
Sbjct: 101 RVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDK 160
Query: 178 VMAAGEHTINNKKVDPKKA 234
+ H I KV+ K+A
Sbjct: 161 ICETQFHNIEGNKVEVKRA 179
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RGFAF+ FK D +
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAI 86
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/64 (29%), Positives = 37/64 (57%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGGLS E + + ++ +FS++G ++ V++ D + +GF F+ F+ + + + P
Sbjct: 32 FVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPA 91
Query: 435 RTIG 446
IG
Sbjct: 92 APIG 95
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 71.7 bits (168), Expect = 5e-13
Identities = 28/79 (35%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
K+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVLK 107
Query: 187 AGEHTINNKKVDPKKAKAR 243
+H +++++++PK++ R
Sbjct: 108 KKDHVLDDREIEPKRSVPR 126
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/82 (34%), Positives = 52/82 (63%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+GGL+ +++ ++++FS++GTI V+ K + +GF F+T+ES VN++LK
Sbjct: 53 FIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKKKD 110
Query: 435 RTIGGKEVDVKRATPKPDGPGA 500
+ +E++ KR+ P+ D GA
Sbjct: 111 HVLDDREIEPKRSVPR-DESGA 131
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAY------GEIESINVKTD-PNTGRSRGFAFIVFKAPES 168
K+FVGGL+ T +++++++F + GE+ +++K D N R RGFAF+ F E
Sbjct: 140 KIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEI 199
Query: 169 IDKVMAAGEHTINNKKVDPKKAKARHGKILSEDSAVKSQMMKSE 300
++KV A H I K+ + KKA+ + ++ S+ + +
Sbjct: 200 VEKVCAMKYHEIRMKQCEVKKAEPQSAMRKKDEQEYNSRSSRDK 243
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Frame = +3
Query: 207 QQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEF------GTILEVEMPFDKTKNQR 368
+ ES E S T + FVGGL+S +++I+ +F+ G +++V++ D+ +R
Sbjct: 126 RDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKR 185
Query: 369 -KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 482
+GF F+TF+++++V + I K+ +VK+A P+
Sbjct: 186 IRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 64.5 bits (150), Expect = 7e-11
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---KAPESI--D 174
KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F K ++ D
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 175 KVMAAGEHTINNKKVDPKKAKAR 243
KV G H I+ K+V+ K+A R
Sbjct: 75 KV-ENGAHRIDGKEVEVKRAIPR 96
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK--- 425
FVGGL+ E +++ +R +F +G + +V + D + +GF ++TF +V ++LK
Sbjct: 17 FVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKV 76
Query: 426 -TPKRTIGGKEVDVKRATPKPD 488
I GKEV+VKRA P+ D
Sbjct: 77 ENGAHRIDGKEVEVKRAIPRDD 98
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEF--GTILEVEMPFDKT-KNQRKGFCFITFESEQVVNDLLK 425
FVGGL + + ++I+ + +V++ K + + +GF F+ +E ++L
Sbjct: 111 FVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCC 170
Query: 426 TPKRTIGGKEVDVKRATPK 482
K + GK V+ K+ATP+
Sbjct: 171 VKKIHVKGKMVEAKKATPR 189
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGE--IESINV--KTDPNTGRSRGFAFIVFKAPESID 174
+K+FVGGL + T +++++ + E ++ +++ K + T + RGFAF+ + D
Sbjct: 108 KKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDET-KHRGFAFVELNNEDQAD 166
Query: 175 KVMAAGEHTINNKKVDPKKAKAR 243
++ + + K V+ KKA R
Sbjct: 167 ELCCVKKIHVKGKMVEAKKATPR 189
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST- 175
Query: 193 EHTINNK 213
H I +
Sbjct: 176 SHRIQGR 182
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 264 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 443
GL ++ E++ +F+ FG I E+ D + +GF F+ F+ ++ ++L T R I
Sbjct: 121 GLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTSHR-I 179
Query: 444 GGKEVDVKRATPKPD 488
G+ +V+ PK +
Sbjct: 180 QGRLCEVRLPRPKEE 194
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 138
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 219 RPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 398
RPKE + + FVG L ++ + +F++FG + +V +P + F F+TF S
Sbjct: 190 RPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP-----KPFRHFGFVTFAS 244
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/89 (33%), Positives = 47/89 (52%)
Frame = +1
Query: 55 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 234
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G ++ KK+
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMVTTTK 183
Query: 235 KARHGKILSEDSAVKSQMMKSETSSVNLE 321
K G + + S + S+ V+ E
Sbjct: 184 KIFIGGLSTNTSEEDMKKYFSQFGKVSCE 212
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +3
Query: 210 QESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF-I 386
QE K+ +TT + F+GGLS+ S+++++ +FS+FG + E + K++ +
Sbjct: 171 QELDGKKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV-SCEYETEDVKDELAAVLISV 229
Query: 387 TFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPDG 491
+ N TP +T K V+R T G
Sbjct: 230 HSNGTHITNQTPSTPNQT--AKVEKVRRPTVSSAG 262
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +3
Query: 273 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 452
++ S + +R F +FG + E + D + +GF F+TF+ + V+ +L + + + GK
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Query: 453 EV 458
++
Sbjct: 177 KM 178
Score = 31.9 bits (69), Expect = 0.45
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEI 87
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTI--LEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 428
F+GGL E S+++++ + LE++M D+ N+ KG+CF+ F +E +V+ L
Sbjct: 107 FIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLV 166
Query: 429 PKRTIGGKEVDVKRA 473
+ GK+V++K+A
Sbjct: 167 RHIQVKGKDVEMKKA 181
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESI 171
KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F + I
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFSNGSDII 67
Query: 172 DKVMAAGE-HTINNKKVDPKKAKAR 243
D ++ E H+I+NK+V+ K+A R
Sbjct: 68 DNIVFNFESHSIDNKQVEVKRAMPR 92
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKT--DPNTGRSRGFAFIVFKAPESID 174
R +KLF+GGL E ++++++ + +K D T + +G+ F+ F +D
Sbjct: 102 RTKKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVD 161
Query: 175 KVMAAGEHTINNKKVDPKKA 234
K+ + K V+ KKA
Sbjct: 162 KLYLVRHIQVKGKDVEMKKA 181
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
+FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK + K +
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK-DDGPSKEVLKK 139
Query: 193 EHTINNKKVDPKKAK 237
H IN K VD K++
Sbjct: 140 SHVINGKTVDVGKSR 154
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/73 (28%), Positives = 41/73 (56%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K+
Sbjct: 317 RERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKI 376
Query: 181 MAAGEHTINNKKV 219
+ H I +V
Sbjct: 377 LEEPVHVIGKSQV 389
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 401
PK+ + FVGGL+S ++ ++++F +FG + V + + + F+ F+ +
Sbjct: 72 PKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRNYGFVLFKDD 130
Query: 402 QVVNDLLKTPKRTIGGKEVDVKRA 473
++LK I GK VDV ++
Sbjct: 131 GPSKEVLK-KSHVINGKTVDVGKS 153
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+KL V L ++TT ELR++F GE+ I++ N+ + A + F+ + I KV+
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLI--NSEKRTCAAIVFFRNLKDIKKVVE 293
Query: 187 AGEHTINNKKV 219
HTI KV
Sbjct: 294 E-NHTIKGLKV 303
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 135
++VGGL T++ +R+HF +G IE++ + + G G
Sbjct: 159 IYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTG 199
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVE 338
+VGGL S ++ +R F +FG I V+
Sbjct: 160 YVGGLPSHFTEQTVREHFKKFGVIEAVK 187
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVGG+ E DD +R FF++FG I E + D+ + KG+ F+T + K +
Sbjct: 13 FVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKR 72
Query: 435 RTIGGKEVDVK----RATPKP 485
I G++ +V A PKP
Sbjct: 73 PMIEGRQANVNLAYLGAKPKP 93
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 174
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKVMA 186
+FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V+
Sbjct: 44 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESVLG 101
Query: 187 AGEHTINNKKVDPKKAKARHGKILSE--DSAVKSQMMKSETSS 309
+H I+N V +K IL S +SQ+++ +SS
Sbjct: 102 RDDHVIDNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSS 144
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 267 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 446
+ S I + +I FS G I V +P + +RKG C +TF S +++K K I
Sbjct: 128 IPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIH 187
Query: 447 GKEV 458
G ++
Sbjct: 188 GYDI 191
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
FVG L + I +FS G +E + KGF F+ ++ V +L
Sbjct: 45 FVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRDD 104
Query: 435 RTIGGKEVDVKR 470
I +V +++
Sbjct: 105 HVIDNSDVSMEK 116
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/68 (19%), Positives = 32/68 (47%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+ K+ + + + ++ +HF + GEI S+ + + T +G + F + +V+
Sbjct: 120 YRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVV 179
Query: 184 AAGEHTIN 207
+H I+
Sbjct: 180 KKRKHHIH 187
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 419
FV G + E ++ E+R FF E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 11 FVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 174
+++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 8 KRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
++V + D+++++ G+I S+ V TDP G+S+GF F+ F+ PE ++ +
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAV--- 166
Query: 193 EHTINNKKVDPKKAKARHGKILSEDSA-VKSQMMKSETSSVN 315
+ +N K++ ++ A K +E +A VK+++ K +N
Sbjct: 167 -NVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERIN 207
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP---ESIDKVM 183
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P +++ +
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 184 AAGEHTINNKKV 219
+N+KKV
Sbjct: 75 RVDGMLLNDKKV 86
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTP 431
+VGGL+ E+ + + F FG I +V++P D T ++ +GF F+ FE +E +
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 432 KRTIGGKEVDVKRATP 479
+ + G+ + V A P
Sbjct: 68 ESELFGRTIRVNLAKP 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = +1
Query: 16 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE----SIDKVM 183
+VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E +ID +
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 184 AAG--EHTINNKKVDPKKAKARHGK-ILSEDS 270
+ TI P K K + + + SEDS
Sbjct: 68 ESELFGRTIRVNLAKPMKIKEGYSRAVWSEDS 99
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F + ++ D + A
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEA 161
Query: 190 --GEHTIN 207
G++ N
Sbjct: 162 MNGQYLCN 169
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+VGGL ++S+ I F + G ++ V MP D+ +G+ F+ F E+ + +K
Sbjct: 16 YVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMN 75
Query: 435 R-TIGGKEVDVKRAT 476
+ GK + V +A+
Sbjct: 76 MIKVYGKPIRVNKAS 90
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFES 398
F+G L +E+ + + + FS FG IL+ ++ D KGF FI F S
Sbjct: 103 FIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFAS 151
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 109 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 243
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 345 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 482
FDK + +GF F+TFESE + T I K+V+VK+A PK
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/57 (31%), Positives = 36/57 (63%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 171
R KL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ + I
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQI 62
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
++G L+ + EI F EFG + +V++ DK + +GF F+ +S +Q+ + K
Sbjct: 12 YIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMN 70
Query: 432 KRTIGGKEVDVKRATPKPDGPG 497
+ ++GG+ + V A K + G
Sbjct: 71 QSSVGGRNITVALALDKTENRG 92
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
+V L+ ++ D ++ FS +G + V++P D+T N +GF ++ + + E+ L
Sbjct: 1160 YVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMD 1219
Query: 432 KRTIGGKEVDVKRATP 479
I G+E+ V+ P
Sbjct: 1220 GGQIDGQEIAVQSVLP 1235
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+VG ++ E+ ++ IR F FG I ++++ +D + KGF F+ ++ + L+
Sbjct: 105 YVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMN 164
Query: 435 RT-IGGKEVDVKRATPKP 485
+GG+ + V R + P
Sbjct: 165 GVLLGGRNIKVGRPSNVP 182
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
++ + ++ +D+I++ F FG ++ + + + KG+ FI +E++Q ND + +
Sbjct: 202 YIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
Query: 435 R-TIGGKEVDVKRATPKP 485
+GG+ + V RA P
Sbjct: 262 LFDLGGQFLRVGRAITPP 279
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEA 155
Score = 36.7 bits (81), Expect = 0.016
Identities = 11/63 (17%), Positives = 38/63 (60%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
++ ++++ + + + +++ F A+G++ ++ +P TG+ +G+ FI ++ +S +
Sbjct: 197 KYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
Query: 181 MAA 189
+A+
Sbjct: 257 IAS 259
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/73 (23%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 HEK-LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
H++ +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 54 HQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFA 113
Query: 181 MAAGEHTINNKKV 219
+ +K+
Sbjct: 114 LKMNNAEFKGRKI 126
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+G L +I ++ +R F+ G + V + D+ KGF ++ FES+ V LK
Sbjct: 59 FIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNN 118
Query: 435 RTIGGKEVDVKRATPKP 485
G+++ V + KP
Sbjct: 119 AEFKGRKIRVFPSKDKP 135
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 431
+VG L I++ ++ F FGT+ V++ +D N+ KG+ F+ F E+E + +
Sbjct: 245 YVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMN 304
Query: 432 KRTIGGKEVDVKRATPKPD 488
+ G+ + + T + D
Sbjct: 305 GFELAGRPLKIGPVTERGD 323
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F + M
Sbjct: 18 LKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAM 74
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMA 186
K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + +++ D +
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 187 AGEHTINNKKVDPKKAKAR 243
+ + + +A++R
Sbjct: 290 LDGQEFDGRSMKVNQARSR 308
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/82 (20%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTP 431
++G L ++++ ++++ FS + +++V++ D+ + +GF F+TF S++ + D + +
Sbjct: 233 YIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELD 291
Query: 432 KRTIGGKEVDVKRATPKPDGPG 497
+ G+ + V +A + G
Sbjct: 292 GQEFDGRSMKVNQARSREQRGG 313
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 91 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 324 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVKRATPKPDGPG 497
+L V++ D+ + +GF F+TF SE ++ + K + G+ + V +A P+ + G
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGERGG 93
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
+F+ LS+++T K + + F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+ LS + + I N F +FG I ++ D KG F+ + S + V L
Sbjct: 419 FIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATD 478
Query: 435 RTIGGKEVDVKR 470
G +D R
Sbjct: 479 EDSEGLFLDGNR 490
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+ ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K +
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 431
++G LS + + + F +++V++ D+ + +GF F+TF S E++ + +
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFD 66
Query: 432 KRTIGGKEVDVKRATPK 482
+ G+ + V +A P+
Sbjct: 67 GQDFDGRPMKVNQAQPR 83
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
L+VGGL + T+++LRDHF +GE+ SI++ N AF+ F + + + AA
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNC------AFVCFTSRAAAE---AAA 356
Query: 193 EHTINNKKVDPKKAKARHGKILSEDSA 273
+ + N + ++ K GK + A
Sbjct: 357 DRSFNKLILKGRRLKIMWGKSQGQQPA 383
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEM 341
+VGGL ++++ ++R+ F +FG + + M
Sbjct: 307 YVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/57 (31%), Positives = 35/57 (61%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
F G L SE++D+ + F+++ + L+ ++ DK N+ KG+ F++F+ ND +K
Sbjct: 220 FCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP---NDFIK 273
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
++F G L E TD+ L F Y + D + +S+G+ F+ FK P K M
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAM 275
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 288 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
D ++ FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 102 DWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 35.9 bits (79), Expect = 0.028
Identities = 28/116 (24%), Positives = 55/116 (47%)
Frame = +1
Query: 55 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 234
L+ F +G++ +++ + G +GFAFI F++ + + V+ + N++ KK
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVV-----QMFNRESKTKKE 158
Query: 235 KARHGKILSEDSAVKSQMMKSETSSVNLELS*KWRCPLTKQRTKERASVSSHLNLS 402
+ R I + K + SE+ + +LS + ++RT SV S+ N S
Sbjct: 159 EKREPSIDDKTKIKKRRRSHSESDLESSKLSLS-QSERKRRRTTSETSVDSNENAS 213
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +1
Query: 55 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV--DPK 228
L FG YG IE +++ TG+S+GF ++ ++ ES + + AG H I+ K V +PK
Sbjct: 79 LESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRAL-AGTHIIDGKWVIAEPK 136
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
L++ GL TTD +L YG I S D +T +G+ F+ F++P S K +AA
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA- 160
Query: 193 EHTINNKKVDPKKAK 237
+ NK + + AK
Sbjct: 161 ---LVNKGIQAQMAK 172
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 398
++ GL + +DD++ ++GTI+ + DK N KG+ F+ FES
Sbjct: 103 YIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFES 150
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
FVG + E S+++++ FSE G ++ + FD+ + KG+ F ++ ++
Sbjct: 28 FVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQE 77
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQET 78
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/94 (31%), Positives = 44/94 (46%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFV L+ TTD++L F +G I S V D TG S +AFI F+ E ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAY--- 178
Query: 193 EHTINNKKVDPKKAKARHGKILSEDSAVKSQMMK 294
++N +D ++ H S +K QM K
Sbjct: 179 -FKMDNVLIDDRRI---HVDFSQSVSKIKLQMRK 208
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
FV L+ +D+++ FS FGTIL E+ D+ + + FI FE ++
Sbjct: 123 FVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 144
K+F+GGL + ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TP 431
F+GGL + +++D+++ S FG + + D KG+ F + + + ++
Sbjct: 676 FIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLN 735
Query: 432 KRTIGGKEVDVKRAT 476
+G K++ V+RA+
Sbjct: 736 GMQLGDKKLIVQRAS 750
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 130 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 243
+GF F+ F+ P +I+ V+A H ++ K +DPK A R
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 345 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPDGPG 497
F++ KGF F+TF + +L + GK +D K A P+ GPG
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR--GPG 182
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/27 (44%), Positives = 23/27 (85%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIE 90
K+F+GGL++ TT+++L+++F YG +E
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMVE 229
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = +3
Query: 222 PKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTI 326
P+ G + + F+GGL+ ++++++ +FS +G +
Sbjct: 194 PQRGSANDGKVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVM 183
LFV + E + ++ + F YGEI++++V D TG +G+A + FK +S + +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 184 AAGEHTINNKKVD 222
E N VD
Sbjct: 355 NGAEMLGQNISVD 367
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 213 ESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
E P EG W FV + E +D+I FS++G I + + D+ KG+ + +
Sbjct: 286 EWHPVEG----WILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEY 341
Query: 393 ES 398
E+
Sbjct: 342 ET 343
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + E+
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATREN 166
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 55 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 234
+++ F G + V +P G SRGFAF+ + E +K G+ N ++V+
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK----GQRAHNGRQVEGSNI 277
Query: 235 KARHG 249
+ +G
Sbjct: 278 RVAYG 282
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE----QVVNDLL 422
FVG L E ++ + + S +G I + + + KG+ F+ + + Q LL
Sbjct: 116 FVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLL 175
Query: 423 KTPKRTIGGK 452
T + IGG+
Sbjct: 176 NTASKYIGGR 185
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 407
++G + ++EI+ FF +FGT+ + + K + KG+ F+ F ++V
Sbjct: 101 YLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEV 151
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
+++G + + E++ F +G + I + + RS+G+AF+ F A + + K+ A
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADT 158
Query: 193 EH 198
H
Sbjct: 159 MH 160
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++F+G + + + EL GEI ++ DP TG ++GFAF F S + +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT- 212
Query: 190 GEHTINNKKVDPKKAKA 240
T+N+K + P + A
Sbjct: 213 ---TLNDKDIRPGRRLA 226
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +3
Query: 225 KEG*STTW------EDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 386
+ G TTW E F+G + + +DE+ + G I E + D KGF F
Sbjct: 140 ERGFPTTWTEESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFC 199
Query: 387 TFESE 401
TF +
Sbjct: 200 TFTEQ 204
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 22 GGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 171
GG + ++ +H A G +E++ + TD NTG+ R F F+ F +P S+
Sbjct: 463 GGDDDDDYERGAINHSNA-GPLENVRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 88 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-ESIDKVMA 186
+++VG L + +K+L D F YG I +++K G FAF+ F+ P ++ D V
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAEDAVKG 319
Query: 187 AGEHTINNKKV 219
H + ++
Sbjct: 320 RDGHEFDGYRI 330
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 428
+V + + + + I F + G + +V++ +D + Q KGFCF+T +++ + ++T
Sbjct: 278 YVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
L+V + + + E R F AYG I + + D +TG +G F+++
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 189
L V + + TD+ R F A + + + +G S GF F+ + E K +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 190 GEHTINNK 213
TI NK
Sbjct: 109 NGFTIGNK 116
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
+ ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 83 RCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/50 (22%), Positives = 28/50 (56%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
++G LS + + + F + +++V + D+ + +GF F+T E+++
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKK 133
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 195 THHQQQESRPKEG*STTWEDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 374
T QQ+ P+E T FVG L + IS ++R F +FG +L+V++ + Q
Sbjct: 220 TPPQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNT 278
Query: 375 FCFITF 392
+ F+ F
Sbjct: 279 YAFVKF 284
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 19 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 185 VTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 249 EDFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 428
E FVG + ++ +DE+ F G I EV + D Q +G+ F+ + S+ +KT
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKT 133
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++FVG + + + EL F G I + + D N G++RG+AF+V+ + + + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKDDAKRCV-- 131
Query: 190 GEHTINNKKVDPKKAKARHGKILSEDSAV-KSQMMKSETSSVNL 318
T+NN ++ R GK + S+V KS ++ + + V+L
Sbjct: 132 --KTLNNYEI-------RKGKCIGVCSSVDKSLLVPTGMNGVDL 166
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 425
F+G + + +DE+ F E G I + + D KGF F TF ++ + +K
Sbjct: 155 FIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
++F+G + + + EL F G I + DP +G ++GFAF F + +
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV-- 210
Query: 190 GEHTINNKKVDPKK 231
++NK++ P K
Sbjct: 211 --KKLDNKEIRPGK 222
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPF---DKTKNQRKGFCFITFESEQVVNDLL 422
FVGGL +I +DEI F FG+ L V+ P K+ KG+ F+ + E V L+
Sbjct: 347 FVGGLPPDIDEDEIHASFCRFGS-LTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKLI 404
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
+VG L ++ D E++ FS++G+ILE ++ D KG+ FI E+ L + +
Sbjct: 618 YVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEKRRQRCLTSSR 671
Query: 435 R 437
R
Sbjct: 672 R 672
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 330 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPK 482
EV + D KN+ KGF F++F E + + TIGGK+V A K
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 94 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH-TINNKKV 219
+ V DP +S+GF F+ F E K +A + TI K+V
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
++VG L + D EL+ F YG I V D +G+AFI + + + + +
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEKRRQRCLTSS 670
Query: 193 EHTINN 210
NN
Sbjct: 671 RRHGNN 676
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 434
F+G LS + ++ + FF E G L + + +GF + F S++ N L+
Sbjct: 183 FLGNLSFDADEETLAAFFEEKG--LSATCRVITQEGRSRGFGYADFTSKEDYNKALELNG 240
Query: 435 RTIGGKEVDVKRATPKPDGPG 497
G+E+ + A KP G
Sbjct: 241 EDCCGREIRINPANSKPSRGG 261
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA- 189
+F+G LS++ ++ L F G + V T GRSRGF + F + E +K +
Sbjct: 182 VFLGNLSFDADEETLAAFFEEKGLSATCRVITQE--GRSRGFGYADFTSKEDYNKALELN 239
Query: 190 GEHTINNK-KVDPKKAKARHG 249
GE + +++P +K G
Sbjct: 240 GEDCCGREIRINPANSKPSRG 260
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 4 HEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+ L V LS++TT L A+ + V D +G SRGF F+ + E+ KV+
Sbjct: 288 NSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKVL 344
Query: 184 A 186
+
Sbjct: 345 S 345
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 345 FDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVKRATPKPDGPG 497
FD+ + +GF F+ ++ + +L + + G++V + A+P+ +G G
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRTEGGG 370
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
LFVG + TT +L++ F YGE+ +++K P + +AF+ F
Sbjct: 251 LFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG---NNPYAFVQF 294
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 147
L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 8 LWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 117
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 25 GLSWETTDKELRDHFGAY--GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 198
GL +E++ ++L F I+ + K+ N G++ G AF+VFK+ K +
Sbjct: 339 GLPFESSKRDLYKFFNGLKIASIDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRS 398
Query: 199 TINNKKVD 222
I ++ ++
Sbjct: 399 YIGHRYIE 406
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 135
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 374
FVG + ++ E+++FF FG ++ ++ D+ K + KG
Sbjct: 82 FVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 288 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
++IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 49 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 228
+++R F YG IE + V D T +RG ++ F S +A E N DPK
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASS--AALACEEMDGRNIGDDPK 94
Query: 229 KAK 237
K
Sbjct: 95 PIK 97
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 43 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 183
+ ++++ FG G + S + D TG+S G+AF+ + P+ +K +
Sbjct: 39 SQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAV 85
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 190 -GEHTINNKKVDPKKAK 237
+ K+ +KAK
Sbjct: 56 LNNSEFHGAKILMEKAK 72
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEV 335
F+G L S + D ++ FS++GTILE+
Sbjct: 360 FIGNLPSGVKDADVNEVFSKYGTILEI 386
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 76 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 315 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 76 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 168
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 315 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 404
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 153
K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVK---TDPNTGRSRGFAFIVFKAPESIDKV 180
KL++G L ++ + +GEIE PN G RG+ F+ FK E K
Sbjct: 388 KLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKA 447
Query: 181 M 183
+
Sbjct: 448 L 448
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 132
KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 171 KLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEV 335
FVG +S ++++R FS FGTI E+
Sbjct: 217 FVGMISKHAKEEDLRVMFSPFGTIEEL 243
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 111
++++G L + TT+ ++R F +YG + IN+K +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/42 (28%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGF 377
++GGLS +++++ + F++FG + +V + D++ K+++ GF
Sbjct: 527 WIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGF 568
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 13 LFVGGLSWETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 189
L+VGGL+ T +E L + FG +GEIE I + N AF+ +K+ ++ A
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRIIPKKN------IAFVRYKS--RLNAEFAK 300
Query: 190 GEHTINNKKVD 222
G+ +++ VD
Sbjct: 301 GDCSLSGAIVD 311
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTD 111
L V GLS TT+++LR F YG +E+I + D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKT 108
+FVG L K L+ +F YGE+ES+ ++
Sbjct: 23 VFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 192
LFVG L ++ T +++ DHF G S + T S+G F+ K +
Sbjct: 76 LFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGCGFLEIDDSIGYTKALNLH 134
Query: 193 EHTINNKKVD 222
+ +K++
Sbjct: 135 HSYLGGRKIN 144
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 174
+F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 353 VFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 180
R +LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++
Sbjct: 4 RGTQLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEA 55
Query: 181 M 183
M
Sbjct: 56 M 56
>SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 121 LCLDLSLH*YSLFHRMLQNDHGAPYLWSPSSAHQQKVSR 5
L +D LH Y F+R L D+ A Y W S +++V+R
Sbjct: 153 LIVDTGLH-YQGFNRSLALDYFAKYAWDTSDGAEKEVTR 190
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 276 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 392
+ +D+++R+ F FG I V++ D + KG+ ++ F
Sbjct: 63 DFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 13 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVM 183
LF + +TD ++ HF Y E+ ++N+K D + R RG FI S +K+
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFIDKALKISAEKLF 226
Query: 184 A-AGEHTINNKKV 219
+N KKV
Sbjct: 227 TEKNGMRLNRKKV 239
>SB_40017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 503 LCSGAIWFWCCTLHI 459
LCS AIW WCC L +
Sbjct: 475 LCSMAIWRWCCRLFL 489
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = +1
Query: 10 KLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFKAPE 165
K++ G L ++ T EL+ F A + + + +P RSRGF F+ F PE
Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPE 110
Query: 166 SIDKVMAAGEHTINNKKVDPKKAK 237
+ ++N K+V + K
Sbjct: 111 DAQTAV----KSLNGKEVQGRTLK 130
>SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 493 GPSGFGVARFTSTSFPPIVLL---GVLSKSFTTCSDSNVMKQKPFLWFFVLSK 344
G +G G+ R++S S P G +S S+T V ++ FL FFVL K
Sbjct: 385 GVNGSGITRYSSLSVPFYCKFSSHGDVSLSYTIKKSVPVWHEEKFLSFFVLYK 437
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 500 CSGAIWFWCCTLHIDLLSTNCSFGSLKQIIYNL 402
C + WC D+L+T CS GS++ ++ L
Sbjct: 3061 CGPSSSVWCLDCRGDILATGCSDGSVEVVVARL 3093
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 135
+ E LF GL+ K L++ YG I++I V DP T +RG
Sbjct: 139 QREVLF-SGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 7 EKLFVGGLSWETTDKELRDHFG--AYGEIES---INVKTDPNTGRSRGFAFIVFKAPESI 171
++ +VG LS + T ++L HFG A + S + + + +G+S GF F+ P+ +
Sbjct: 5 KRFYVGNLSVKATREDLSHHFGLDATPYLRSSCWVELAVE-KSGKSLGFGFV--NVPKHL 61
Query: 172 -DKVMAAGEHTINNKKVDPKKAKAR 243
D +M + + +K++ + A+ +
Sbjct: 62 ADHLMHLNQTKLFDKRITIEPARGK 86
>SB_19883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +1
Query: 1 RHEKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 156
R+ KLF G SW + +R FG + I N K G+ FK
Sbjct: 535 RNVKLFHGINSWNKISENVRHSFGFFVWITLSNRKRHKRYNNKYGYGVTAFK 586
>SB_7579| Best HMM Match : HEAT (HMM E-Value=0.0096)
Length = 1276
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 463 TSTSFPPIVLLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKG 341
T TS+P ++LLG L + S V ++K LW + L G
Sbjct: 177 TKTSYPLLLLLGKLLELIPPLSGEIVEREK--LWHYCLQNG 215
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,198,696
Number of Sequences: 59808
Number of extensions: 330559
Number of successful extensions: 1038
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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