Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20055
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 158 4e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 9e-39
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 142 2e-34
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 95 6e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 62 5e-10
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.0
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 3.1
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.1
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.1
SB_56695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_49831| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 4.1
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 4.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_12344| Best HMM Match : ATP-synt_B (HMM E-Value=1.9) 29 4.1
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.4
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 28 7.2
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 9.5
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.5
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 158 bits (384), Expect = 4e-39
Identities = 76/84 (90%), Positives = 80/84 (95%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTF
Sbjct: 146 VPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTF 205
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+LTIEDGIFEVKSTAGDTH G
Sbjct: 206 DVSVLTIEDGIFEVKSTAGDTHLG 229
Score = 136 bits (330), Expect = 1e-32
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
+NP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVLTKMKETAEAYLG V +AV+T P
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 126 bits (303), Expect = 3e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 75 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 255 *TP 263
P
Sbjct: 61 MNP 63
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 157 bits (381), Expect = 9e-39
Identities = 76/84 (90%), Positives = 78/84 (92%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTF
Sbjct: 239 VPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTF 298
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+L+IEDGIFEVKST GDTH G
Sbjct: 299 DVSVLSIEDGIFEVKSTHGDTHLG 322
Score = 126 bits (304), Expect = 2e-29
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 75 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 255 *TPT 266
PT
Sbjct: 61 MNPT 64
Score = 113 bits (273), Expect = 1e-25
Identities = 63/112 (56%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV- 430
+NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 431 ------------------------SSMVLTKMKETAEAYLGKTVQNAVITFP 514
SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2
Query: 425 EVSSMVLTKMKETAEAYLGKTVQNAVITFP 514
++SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAG 558
VPAYFNDSQRQATKDAG
Sbjct: 171 VPAYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (377), Expect = 3e-38
Identities = 74/85 (87%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTF
Sbjct: 146 VPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTF 205
Query: 688 DVSILTIEDG-IFEVKSTAGDTHFG 759
DVSILTI+DG +FEVKSTAGDTH G
Sbjct: 206 DVSILTIDDGSLFEVKSTAGDTHLG 230
Score = 138 bits (333), Expect = 6e-33
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVL KMKETAEAYLG+ V +AVIT P
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 122 bits (294), Expect = 3e-28
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 75 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 255 *TP 263
P
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 142 bits (345), Expect = 2e-34
Identities = 65/84 (77%), Positives = 77/84 (91%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTF
Sbjct: 844 VPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTF 902
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+LTI++G+FEV +T GDTH G
Sbjct: 903 DVSLLTIDNGVFEVVATNGDTHLG 926
Score = 116 bits (278), Expect = 3e-26
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 436
NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819
Query: 437 MVLTKMKETAEAYLGKTVQNAVITFP 514
MVLTKMKETAEAYLGK V +AV+T P
Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVP 845
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVA*TP 263
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 95.1 bits (226), Expect = 6e-20
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT
Sbjct: 176 VPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTL 234
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+L I+ G+F + AG+ G
Sbjct: 235 DVSLLNIQGGMFVTMAMAGNNRLG 258
Score = 61.3 bits (142), Expect = 8e-10
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEV 430
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 431 SSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQKMQVPSLA 571
V+ K++ AE L TV AV++ P +K + ++ SLA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLA 195
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 81 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 255 *TP 263
P
Sbjct: 90 INP 92
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 433
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+M+ T++K TAE L V + VI+ P
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVP 204
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +1
Query: 493 ECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 663
+C VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 664 FDLGGGTFDVSILTIEDGIFEVKSTAGDTHFG 759
D+G + V I G +V STA + + G
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTAVEPNLG 289
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 248
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 62.1 bits (144), Expect = 5e-10
Identities = 42/75 (56%), Positives = 46/75 (61%), Gaps = 26/75 (34%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAI 615
VPA+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAI
Sbjct: 45 VPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAI 104
Query: 616 AYGLDKK--GTGERN 654
AYGLDK G ERN
Sbjct: 105 AYGLDKARGGKAERN 119
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 380 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 514
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVIT P
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 655 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHFG 759
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+ G
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLG 675
VP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G
Sbjct: 112 VPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171
Query: 676 GGTFDVSIL 702
+ +I+
Sbjct: 172 ASSTVATIV 180
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 374 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 514
P +K Y+ D TF PEE+ M+L + E + +++ V+T P
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 144 GKVEIIANDQGNRTTPSYVAFTDTERLI 227
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 238
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 239 QEPGGVNPNNTIFDA 283
G++P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 153 EIIANDQGNRTTPSYVAFT-DTERL 224
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 655 VLIFDLGGGTFDVSILTIEDGIFEVK 732
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 661 IFDLGGGTFDVSILTIEDGIFEV 729
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 371 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQK 550
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 551 MQ 556
Q
Sbjct: 714 SQ 715
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 418 PRGSQFHGAYENEGNCRSLSWQNCAECSYHVPAYFN 525
PRG Q Y G+C S+S +NC + S+ V +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 752 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 636
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_56695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -1
Query: 528 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTS 349
VI V GNV+ V + + + +F+ ++ + V+S P++ ++ L PS+ T
Sbjct: 39 VISVLGNVLVCIACVASKRLHSYTSVFIVSLATSDILVGVVSVPVWISVQLNGEPSMVTM 98
Query: 348 KGQCFMSAC 322
M C
Sbjct: 99 PTMYMMWLC 107
>SB_49831| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 339
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -1
Query: 528 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTS 349
VI V GNV+ V + + + +F+ ++ + V+S P++ ++ L PS+ T
Sbjct: 39 VISVLGNVLVCIACVASKRLHSYTSVFIVSLATSDILVGVVSVPVWISVQLNGEPSMVTM 98
Query: 348 KGQCFMSAC 322
M C
Sbjct: 99 PTMYMMWLC 107
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 556 LHLLWLVFESH*STRERDNCILHSFAKIS 470
++ LWL F + S+ D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 738 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 571
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 570 ---ARDGTC 553
AR TC
Sbjct: 345 VYNARISTC 353
>SB_12344| Best HMM Match : ATP-synt_B (HMM E-Value=1.9)
Length = 341
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/101 (23%), Positives = 41/101 (40%)
Frame = +2
Query: 236 RQEPGGVNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTF 415
R+ G V+ + T + +IG F QAD+ + + K+++ F
Sbjct: 53 RKSTGKVDNSKTYTAGRYMIGPDFTFKKYQADLHFVQLDTFAVFTSGKLELL-----SVF 107
Query: 416 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKD 538
P +V S L+++ ETA VQ + T +KD
Sbjct: 108 IPNDVKSRYLSQVIETANEERETFVQREKLVRKETEKLIKD 148
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 668 TSAAVPSTCPSLPSRMVSSR*NPPPATP 751
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 528 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLI 379
VI + GN +T + + R V +FV ++ L+ G VLS P+ T++
Sbjct: 36 VIVLFGNSLTLYIVLSNRRLRTVPNLFVVSLALSDLGMGVLSMPMCITVL 85
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 604 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 753
A A L +G E + D G GT VS + +E+G +++ D H
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEH 1554
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 21 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 107
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 238
L++ N + ++ R GY L R C R + +R + H++L R +RC
Sbjct: 661 LRLVNTRDDKTHGKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTDTETRFCEKRCA 718
Query: 239 QEPGGVNPNNTIFDA 283
G++P N F+A
Sbjct: 719 GTASGMDPKNIPFNA 733
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 468 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 289
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 288 RLASNIVL 265
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 137 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGVN 259
P R DH R ++ RH A +R +EPGGV+
Sbjct: 942 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVH 982
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 137 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGVN 259
P R DH R ++ RH A +R +EPGGV+
Sbjct: 75 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVH 115
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 202 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 327
R+ P S+ PP RW+ P Q QT H R Y S
Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 103 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 246
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 663 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 577
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 103 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 246
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,454,835
Number of Sequences: 59808
Number of extensions: 614002
Number of successful extensions: 2110
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -