Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20005
(763 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 125 3e-29
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 123 1e-28
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 113 1e-25
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 112 3e-25
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 105 4e-23
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 99 2e-21
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 95 6e-20
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 86 3e-17
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 85 6e-17
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 83 2e-16
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 83 2e-16
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 82 6e-16
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 81 1e-15
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 81 1e-15
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 75 5e-14
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 68 1e-11
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 64 2e-10
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 63 2e-10
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 62 4e-10
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 62 6e-10
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 60 3e-09
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 58 6e-09
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 57 2e-08
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 57 2e-08
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 53 2e-07
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 53 2e-07
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 52 5e-07
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 52 7e-07
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 51 9e-07
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 49 4e-06
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 49 5e-06
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 48 8e-06
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 47 1e-05
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 46 4e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 45 6e-05
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 45 8e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 43 2e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 43 2e-04
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 43 3e-04
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 42 4e-04
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 42 5e-04
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 42 7e-04
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 41 0.001
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 41 0.001
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 41 0.001
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 40 0.003
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 38 0.009
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 38 0.009
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 37 0.021
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 37 0.021
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 36 0.036
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 36 0.036
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 36 0.047
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 35 0.083
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 34 0.11
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 34 0.11
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 33 0.19
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 33 0.25
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 33 0.33
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 29 5.5
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 29 5.5
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 29 5.5
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 28 7.2
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.5
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 125 bits (302), Expect = 3e-29
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
M YD LFKLLLIGDSGVGK+S+L RF++D F+ ++ISTIG+DFKIRT+ +DGK +KLQ
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAGQERFRT+TTAY
Sbjct: 61 IWDTAGQERFRTLTTAY 77
Score = 77.8 bits (183), Expect = 9e-15
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
R + GI+L+YDV ++F ++ W+ + E A V +++GNKCDL RQV ++
Sbjct: 79 RSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKE 138
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A + I F+ETSAKDS NVE F
Sbjct: 139 FAEKLDISFIETSAKDSTNVESVF 162
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 123 bits (297), Expect = 1e-28
Identities = 54/80 (67%), Positives = 70/80 (87%)
Frame = +1
Query: 268 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIE 447
GIMLVYD+T EK+F+NI W+RNIEE+A+ DVEKMILGNKCD+D +R VS+ERGEQ+A E
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIARE 186
Query: 448 YQIKFVETSAKDSLNVEYAF 507
+ I+F+ETSAK ++N+E AF
Sbjct: 187 HGIRFLETSAKTNINIEQAF 206
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTI 145
K+YD LFKLLLIGDSGVGKT ILFRFS+DAFN +FISTI
Sbjct: 4 KSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 113 bits (273), Expect = 1e-25
Identities = 48/75 (64%), Positives = 66/75 (88%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ +D +FKLL+IG+S VGKTS LFR+++D+F +F+ST+GIDFK++T+ + K+VKLQIW
Sbjct: 16 QNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIW 75
Query: 209 DTAGQERFRTITTAY 253
DTAGQER+RTITTAY
Sbjct: 76 DTAGQERYRTITTAY 90
Score = 35.1 bits (77), Expect = 0.063
Identities = 12/23 (52%), Positives = 21/23 (91%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKN 324
RG+MG +L+YD+TNE+SF+ +++
Sbjct: 92 RGAMGFILMYDITNEESFQAVQD 114
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 112 bits (270), Expect = 3e-25
Identities = 48/84 (57%), Positives = 68/84 (80%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MGIMLVYDVTNEKSF NI W++ I+++A+ DV++M++GNKCD+ +R +S+ +GEQ
Sbjct: 27 RGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQ 86
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LA Y I F+ETSA ++NVE +F
Sbjct: 87 LASSYGISFIETSALSNINVEKSF 110
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 182 GKKVKLQIWDTAGQERFRTITTAY 253
GKK+KLQIWDTAGQERF TITTAY
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAY 25
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 105 bits (252), Expect = 4e-23
Identities = 52/84 (61%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Frame = +1
Query: 220 SREIPYNNNSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 399
S+EIP + I GIMLVYD+TN+KSFE +NWIRNIEE+AS DVEKM+LGNKCD++
Sbjct: 73 SKEIPAD--IIYEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDME 130
Query: 400 SQRQVSKERGEQ---LAIEYQIKF 462
+RQVSKERGEQ L + Y++ F
Sbjct: 131 DRRQVSKERGEQGDLLFLMYKVPF 154
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 103 bits (247), Expect = 2e-22
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 21/98 (21%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFS---------------------EDAFNISFIS 139
M YD LFKLLLIGDSGVGK+ +L RF+ +D + S+IS
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYIS 60
Query: 140 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAY 253
TIG+DFKIRTI+LDGK +KLQIWDTAGQERFRTIT++Y
Sbjct: 61 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSY 98
Score = 87.4 bits (207), Expect = 1e-17
Identities = 38/88 (43%), Positives = 62/88 (70%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 423
+S RG+ GI++VYDVT+++SF N+K W++ I+ A +V K+++GNKCDL +++ V
Sbjct: 96 SSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFT 155
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAF 507
++ A + F+ETSAK++ NVE AF
Sbjct: 156 TAKEYAESLGVPFLETSAKNATNVEQAF 183
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 99 bits (238), Expect = 2e-21
Identities = 43/73 (58%), Positives = 60/73 (82%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
YD L+K++LIGDSGVGK+S+L RF+ + F+I STIG++F R+I ++GK +K Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 215 AGQERFRTITTAY 253
AGQER+R IT+AY
Sbjct: 69 AGQERYRAITSAY 81
Score = 71.7 bits (168), Expect = 6e-13
Identities = 28/77 (36%), Positives = 52/77 (67%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG++G +LVYD+T +K+F++++ W+ + E+A + M++GNKCDL R V+ + ++
Sbjct: 83 RGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDAKK 142
Query: 436 LAIEYQIKFVETSAKDS 486
E+ + F+E SA D+
Sbjct: 143 YGDEHGLAFIEASALDA 159
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 96.7 bits (230), Expect = 2e-20
Identities = 39/68 (57%), Positives = 57/68 (83%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K+L++G+SGVGK+S+L RF++D F+ +TIG+DFK++T+ ++G K KL IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 230 FRTITTAY 253
FRT+T +Y
Sbjct: 70 FRTLTPSY 77
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIE-ENASADVEKMILGNKCDLDSQRQVSKE 423
S RG+ G++LVYD + ++F+ ++ W+ +E + D+ KM++GNK D S S +
Sbjct: 76 SYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS----SSK 131
Query: 424 RGEQLAIEYQ 453
G++L +Y+
Sbjct: 132 CGQKLLGDYR 141
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/73 (57%), Positives = 59/73 (80%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
Y LFK++L+GD+ VGKT ++ +F++ F + TIG+DF I+T+D+DG+KVKLQIWDT
Sbjct: 4 YSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDT 63
Query: 215 AGQERFRTITTAY 253
AGQERFR+IT +Y
Sbjct: 64 AGQERFRSITQSY 76
Score = 51.6 bits (118), Expect = 7e-07
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +1
Query: 268 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 414
G+++ YD+TN+KSFE++ W+ + S DV I+GNK DL + R+V
Sbjct: 82 GVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKV 130
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 95.1 bits (226), Expect = 6e-20
Identities = 41/75 (54%), Positives = 60/75 (80%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
KT + +FK++ IGDSGVGK+S L RF D + SF +TIG+DF+I+T++++G+ + +Q+W
Sbjct: 891 KTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Query: 209 DTAGQERFRTITTAY 253
DTAGQERFR+IT Y
Sbjct: 951 DTAGQERFRSITKQY 965
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL---DSQRQVSKER 426
R + GI++ YDVT E SF N+K W+ ++EE A V KM+LGNK DL + R V
Sbjct: 967 RKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKTID 1026
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYA 504
G+ LA +Y ++ETSAK N++ A
Sbjct: 1027 GKNLANQYDALYMETSAKTGNNIQEA 1052
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 93.1 bits (221), Expect = 2e-19
Identities = 38/72 (52%), Positives = 56/72 (77%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
D +FK+L++GD VGK+S++ RF +D FN +TIG+DF I DLDGKKVKLQ+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 218 GQERFRTITTAY 253
G+E++R ++ ++
Sbjct: 68 GEEKYRALSRSF 79
Score = 68.5 bits (160), Expect = 6e-12
Identities = 33/90 (36%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +1
Query: 241 NNSILRGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQRQVS 417
+ S RG+ G +LV+DV+ ++SF++I++ W+ + + +D +++GNKCD ++VS
Sbjct: 76 SRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD-KKDKKVS 134
Query: 418 KERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
+E + L+ Y + ++ETSAKD+ NV AF
Sbjct: 135 EEDIQNLSSCYNLSWLETSAKDNTNVNEAF 164
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 86.2 bits (204), Expect = 3e-17
Identities = 54/159 (33%), Positives = 87/159 (54%)
Frame = +1
Query: 31 NLRLFIQITSNRRFGSGKNINTI*IF*RCI*HLLYIHNWYRL*NSNNRP*WQKS*ITNMG 210
++RL +Q +R FGS K +++ I R L ++ R N N+ W+ G
Sbjct: 324 SVRLLVQDLIDRGFGSRKILSSSSIRRRLPQRELPDYDRSRFQNKNDESGWEA------G 377
Query: 211 YCWSREIPYNNNSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 390
R I +S RG+ G+M+VYD+T +S+ N+ W+ +E AS V +++GNK
Sbjct: 378 QERFRTI---TSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKI 434
Query: 391 DLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
DLD+ R+V + ++ A + + FVETSAK + NV+ AF
Sbjct: 435 DLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAF 473
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +1
Query: 265 MGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAI 444
+GI+LVYD+T E SF++I W++NIE+NAS +V K++LGNK D + +R + +RG +
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 445 EYQIKFVETSAKDSLNVEYAF 507
+ ++F E SA+ NV+ AF
Sbjct: 63 DNNLEFYEASARTGENVQQAF 83
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 85.0 bits (201), Expect = 6e-17
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVK 196
+M Y F+++LIGDS VGK+S+L +F+E F + T+G+DF +R ++L G ++K
Sbjct: 5 RMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIK 64
Query: 197 LQIWDTAGQERFRTITTAY 253
LQIWDTAGQERFR+IT +Y
Sbjct: 65 LQIWDTAGQERFRSITYSY 83
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENAS-ADVEKMILGNKCDLDSQRQVSKE 423
S R ++G +++YD+TN SF N+ +W + ++ A+V M++G+K D +S+R VS E
Sbjct: 82 SYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTE 141
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAF 507
GE A + + F+ETSAK N+E AF
Sbjct: 142 EGECFAEAHNMMFIETSAKVLCNIEEAF 169
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FK+L++GD GVGKTS++ RF++ F + ST+G+D R +D+ G +VKLQ WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 227 RFRTITTAY 253
+FR IT +Y
Sbjct: 72 KFRGITQSY 80
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL-DSQRQVSKE 423
S R + ++LV+D+TN +F +I W+ N+++ + ++ K+++GNK DL + R+V+
Sbjct: 79 SYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTR 138
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAFSL*PGTKSENGK 543
LA ++ ++ETSAK NVE + EN K
Sbjct: 139 SAANLAEFEELLYLETSAKWDDNVEVLIAELAEQLRENAK 178
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MG +LVYD+ SF N+ W+ + ++AS D+ +++GNK DL R + RG+Q
Sbjct: 14 RGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQ 73
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A E+ + F+ETSA DS NV AF
Sbjct: 74 FAAEHGMLFMETSALDSTNVAEAF 97
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/70 (48%), Positives = 53/70 (75%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 223
+FK++L GD+ VGK+S + R + F+ + ST+G+DF+++T+ +DGK LQ+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 224 ERFRTITTAY 253
ERFR+I +Y
Sbjct: 502 ERFRSIAKSY 511
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL------DSQR 408
S R + G++L+YDVT E SF ++++W+ IEE+ S V M+ GNK D+ +++
Sbjct: 510 SYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKT 569
Query: 409 QVSKERGEQLAIEYQIKFVETSAKDSLNVEYA 504
++ E G +LA E+ F+ETS+K++ N+ A
Sbjct: 570 VITAESGSRLAKEHGALFIETSSKENKNIAEA 601
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 81.8 bits (193), Expect = 6e-16
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
YD LFK++LIGDSGVGK+++L RF+ + FN+ STIG++F R+I +DGK +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/45 (77%), Positives = 43/45 (95%)
Frame = +2
Query: 119 FNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAY 253
F+ S+I+TIG+DFKIRTI++DG+KVKLQIWDTAGQERFRTIT+ Y
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTY 46
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+ G+++VYDVT+ +F N+K W+ I++N DV ++++GNK D S++ V ++
Sbjct: 48 RGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQK 106
Query: 436 LAIEYQIKFVETSAKDSLNVE 498
+ I+ ETSAK+++NVE
Sbjct: 107 FGEQMNIRVFETSAKENINVE 127
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 11/81 (13%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTI-----------DLDGKK 190
L K L +GDSGVGKTS+L+++++ FN F+ TIGIDF+ + + G++
Sbjct: 106 LIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQR 165
Query: 191 VKLQIWDTAGQERFRTITTAY 253
+ LQ+WDTAGQERFR++TTA+
Sbjct: 166 IHLQLWDTAGQERFRSLTTAF 186
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA 351
+ R +MG +LV+D+T+E+SF NI+NW+ ++ +A
Sbjct: 185 AFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 370 MILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNV 495
++LGNK DL+ R V + LA +K+ ETSA NV
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNV 511
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 78.6 bits (185), Expect = 5e-15
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K++ +GD GVGK+S+ RF D F + TIGIDF +T+ LD +V+LQIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 230 FRTITTAY 253
FR + +Y
Sbjct: 225 FRCLIHSY 232
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/89 (33%), Positives = 53/89 (59%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 423
+S +R S ++V+D+TN SFE++ +W++ + + +I+GNK D +R+VS +
Sbjct: 230 HSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYD 289
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAFS 510
E+ A + +VETSAK NV+ F+
Sbjct: 290 VAEKSAERLGLSYVETSAKSGYNVKLLFT 318
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 223
LFK++L+G++GVGKTS+ +R E+ F +TIGID + + + K+V L +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 224 ERFRTITTAY 253
ERFRT+T Y
Sbjct: 71 ERFRTVTKNY 80
Score = 34.7 bits (76), Expect = 0.083
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+ +L+++V + S + + +WI + +E D K+++ NK DLD QV+ E E
Sbjct: 82 RGAHACILMFNVDDPGSLQYLLHWIHDTDE-FCPDALKVLVANKIDLD--EQVTTESVEL 138
Query: 436 LAIEYQ 453
A ++
Sbjct: 139 FASSHE 144
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 74.5 bits (175), Expect = 8e-14
Identities = 33/63 (52%), Positives = 47/63 (74%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FK+++IGDS VGKT + +R F +TIG+DF ++++L+G+ VKLQ+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 227 RFR 235
RFR
Sbjct: 107 RFR 109
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENA-SADVEKMILGNKCDLDSQRQVSKERGE 432
R ++ +YD+T + SFE + WI +A S DV K+++GNKCDL +R VS
Sbjct: 118 RNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNIAR 177
Query: 433 QLAIEYQIKFVETSAKDSLNVE 498
+ A + + E S K+ +E
Sbjct: 178 KFADSHNMPLWEISIKNDAELE 199
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/61 (49%), Positives = 49/61 (80%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
YD LFK++LIGDSGVGK+++L R++++ F++ +TIG++ R ++++GK V+ QIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 215 A 217
A
Sbjct: 75 A 75
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 41 CLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 220
C FKL+L+G+S VGK+S++ RF + F+ STIG F +T+ LD VK +IWDTAG
Sbjct: 20 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG 79
Query: 221 QERFRTITTAY 253
QER+ ++ Y
Sbjct: 80 QERYHSLAPMY 90
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+ ++VYD+TN+ +F K W++ ++ AS ++ + GNK DL S+R V E +
Sbjct: 92 RGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQS 151
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A + + F+ETSAK ++NV F
Sbjct: 152 YAEDNGLLFMETSAKTAMNVNDIF 175
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S RG+ G +LVYD+++ ++F ++ NW+ + AS ++ +++GNK DLD+ R+V+
Sbjct: 163 SYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLE 222
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
+ A E ++ F+ETSA NVE F
Sbjct: 223 ASRFAQENELMFLETSALTGENVEEGF 249
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +2
Query: 140 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAY 253
TIG++F + +++ GK VKLQIWDTAGQERFR++T +Y
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSY 164
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S R G+++ YD+T +F+N+ W ++++ A + K+++GNK DL+ +R+VS E
Sbjct: 114 SYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLED 173
Query: 427 GEQLAIEY-QIKFVETSAKDSLNVEYAF 507
A Y + +ETSAKD+ N+E AF
Sbjct: 174 AVNCASHYGMLDVLETSAKDATNIEAAF 201
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 191 VKLQIWDTAGQERFRTITTAY 253
VKLQIWDTAGQERFRTIT +Y
Sbjct: 95 VKLQIWDTAGQERFRTITQSY 115
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2
Query: 59 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 238
L D GVGK+S++ RF F+ TIG++F + + LDG+ LQIWDTAGQERF++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 239 ITTAY 253
+ T +
Sbjct: 276 LRTPF 280
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQVSKE 423
RGS +LVY V + KSF N+ W + A D + ++LGNK D++ R VS+E
Sbjct: 282 RGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RAVSQE 340
Query: 424 RGEQLAIEYQ-IKFVETSAKDSLNVEYAF 507
+ + + + ETSAKDS NV AF
Sbjct: 341 EADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 63.7 bits (148), Expect = 2e-10
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
R GI+LVYD+T KSF+N++ W+ +I +N E +++GNKCD+ R+V K +GE+
Sbjct: 54 RKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVPKRKGEE 113
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
R + +LVYD+T E +F +++ WIR ++ D+ + GNKCD QR V + +
Sbjct: 31 RDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQD 90
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A F ETSA S NV + F
Sbjct: 91 FAGSVDAIFAETSALTSKNVHWLF 114
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 176 LDGKKVKLQIWDTAGQERFRTITTAY 253
++ K K IWDTAGQERF+++ Y
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLY 29
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 62.5 bits (145), Expect = 4e-10
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERG 429
+R G + V+ V N KSFE+I + I+ A+ M+L GNKCDL QR VS
Sbjct: 298 MRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDL-PQRTVSTSDA 356
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
++LA Y I F ETSAK V+ AF
Sbjct: 357 QELAKSYNIPFQETSAKTRQGVDDAF 382
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 61.7 bits (143), Expect = 6e-10
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +1
Query: 304 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 483
SF+ WI ++ DV M++GNK DL +RQV+ E GE+ A E + F+ETSAK
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 484 SLNVEYAF 507
NV+ F
Sbjct: 73 GYNVKQLF 80
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 IVVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTID-LDGK 187
+ ++M Y FK+L++GD GK S + R+ + ++ + TIG+DF ++TI
Sbjct: 7 VPLQMLNQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNT 66
Query: 188 KVKLQIWDTAGQERFRTITTAY 253
++LQIW AGQERF ++T Y
Sbjct: 67 TIRLQIWLIAGQERFSSMTRVY 88
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 5989
Query: 230 F 232
+
Sbjct: 5990 Y 5990
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 VVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFI-STIGI-DFKIRTIDLDGK 187
++ +D FK L+IG+SGVGK+ ++ + F++ F+ ST+ + D D K
Sbjct: 340 IISRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNK 399
Query: 188 KVKLQIWDTAGQERFRTITTAY 253
K+KL I DTAGQER+ +I AY
Sbjct: 400 KIKLTIGDTAGQERYFSILPAY 421
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD--VEKMILGNKCDLDSQRQVSKERG 429
RG G+ LV+D+T E +F + WI + AD ++ +++GNK D++ R V+ R
Sbjct: 423 RGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTYSRA 482
Query: 430 EQLAIEYQIKFVETSAKD 483
++ A ++ETSAKD
Sbjct: 483 KEFAAMNGFPYIETSAKD 500
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 58.4 bits (135), Expect = 6e-09
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 429
RG+MG +LVYD+ SF N+ W+ + ++AS D+ +++GNK DL R + RG
Sbjct: 14 RGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRG 71
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 56.8 bits (131), Expect = 2e-08
Identities = 22/67 (32%), Positives = 42/67 (62%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG++G +LVYD+ ++EN++ W++ + ++A +++ M++GNK DL R V + +
Sbjct: 4 RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKA 63
Query: 436 LAIEYQI 456
A Y I
Sbjct: 64 FAEIYHI 70
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +1
Query: 355 ADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
A+ + +++GNKCD++ +R VS +RG+QLA + ++F ETSAKD+ NV+ F
Sbjct: 11 ANAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVF 61
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKERG 429
+R G +++Y +T+ SF + IE + D+ +++GNK DL+ +R+V+ + G
Sbjct: 6 MRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQEG 65
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
++LA + F ETSA V+ AF
Sbjct: 66 QELAHRFDCPFFETSACQRHFVDDAF 91
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 268 GIMLVYDVTNEKSFENIKNW---IRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQL 438
G ++VY + ++FE K IR I++ + ++ GNKCDL R VS++ +
Sbjct: 196 GFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSRQEAREF 255
Query: 439 AIEYQIKFVETSAKDSLNVEYAF 507
A E++ F ETSA +++N + F
Sbjct: 256 AAEHECVFHETSAANNINTKVIF 278
Score = 35.1 bits (77), Expect = 0.063
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
+ L+L+G +GVGK+++L RF F + T+ + + + + +D L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTA 183
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 250 ILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD-SQRQVSKER 426
I R G ++V+DVT+ KSFE + W+ ++E+ ++ +++GNK D + ++
Sbjct: 42 IYRALSGAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNV 101
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAFSL 513
+ A ++ETSA N++ F++
Sbjct: 102 AAKYATNNGFLYIETSALGMCNIDEIFAI 130
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
KL+++GD GVGK++ L + +AF +I T+ D I LDGK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQED 65
Query: 230 F 232
+
Sbjct: 66 Y 66
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 52.0 bits (119), Expect = 5e-07
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQVSKE 423
RG+ +LV+DVT SF+ + +W AS D E ++LGNK DL++ R VS +
Sbjct: 19 RGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RAVSAK 77
Query: 424 RGEQLA-IEYQIKFVETSAKDSLNVEYAF 507
R + + I + ETSAK+++NVE AF
Sbjct: 78 RAQAWCHSKNDIPYFETSAKEAINVEQAF 106
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAGQERF+++ A+
Sbjct: 1 IWDTAGQERFQSLGVAF 17
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDSQRQVSKERG 429
++ G +LVY + N ++F ++K I S +V +++GNK D+ +R+VS
Sbjct: 56 IKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEA 115
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAFS 510
+ LA + F ETSAK NV+ F+
Sbjct: 116 KDLAEAWGCPFYETSAKTRSNVDKVFA 142
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKL 199
MA D ++K+ L G GVGKTSI R S D F S ID I + + KK+K+
Sbjct: 1 MAGPEDEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKI 60
Query: 200 QIWDTAGQERFRTIT 244
+WDT G E + ++T
Sbjct: 61 HLWDTLGMEEYESLT 75
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 56 LLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFR 235
L +GD G GKT+ + R F +I+T+G++ +K +WDTAGQE+F
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 236 TITTAYSV 259
+ Y +
Sbjct: 96 GLRDGYYI 103
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/78 (26%), Positives = 45/78 (57%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ 453
++++DVT+ +++N+ NW R++ E ++ ++ GNK D+ R+V K + +
Sbjct: 109 IIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDI-KDRKV-KAKAITFHRKKN 165
Query: 454 IKFVETSAKDSLNVEYAF 507
+++ + SAK + N E F
Sbjct: 166 LQYYDLSAKSNYNFEKPF 183
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +1
Query: 337 IEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
++ N + + +++GNKC LD +R+VS G LA E + F ETSA+ ++NV F
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCF 57
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD GVGKTS+L + D F S++ T + + T++++ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHV-TVEVNKKLCMIEFCDTAGQED 78
Query: 230 F 232
F
Sbjct: 79 F 79
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +2
Query: 53 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERF 232
++L+GDS GKT++L + + FN + +T+ + +++DG++++L +WDT+G E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 MILGNKCDLDSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAF 507
+++GNKCDL+ +R V K++G+ LA ++ F+ETSAK +NV F
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
K D +KL+++G GVGK+++ +F + F + TI ++ + + +D + L I
Sbjct: 6 KDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDIL 64
Query: 209 DTAGQERFRTITTAY 253
DTAGQE F + Y
Sbjct: 65 DTAGQEEFSAMREQY 79
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDSQRQVSKERG 429
+R G +LV+ VT+ SFE I + I + +I GNK DL+ +R VS G
Sbjct: 80 MRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAEG 139
Query: 430 EQLA 441
++LA
Sbjct: 140 QELA 143
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-----DVEKMILGNKCDLDSQR 408
N + + G +LVYDVT+ +SFE + W+ I+++ + V ++ NK D +R
Sbjct: 8 NEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD-SRKR 66
Query: 409 QVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
V + G Q A ++ + ETSA+ + F
Sbjct: 67 LVEESEGRQWAENHKFCYFETSAQTGDGIPEVF 99
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 229 IPYNNNSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD--VEKMILGNKCDLDS 402
IP +S+ +++ YDV+NE+SF W+ A +D + ++ K DL
Sbjct: 51 IPETTDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQ 110
Query: 403 QRQVSKERGEQLAIEYQIKFVETSA 477
+R +S ++G+ A +++ E SA
Sbjct: 111 RRVISTKQGKDYANSKNLEYFECSA 135
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDA--FNISFISTIGIDFKIRTIDL 178
K+L+ GDS VGK++++ F D + ++ T+G + ++ +++
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNI 51
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
F ++ G S VGKTS++ RF AFN + TI DF I+ + + + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 227 RF 232
F
Sbjct: 88 EF 89
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD----VEKMILGNKCDLDSQRQV 414
S + G ++VY +T+ S+E + ++ + + D + +++GNK DL R V
Sbjct: 29 SYIHNGDGFVVVYSITDYYSYEMARQLVKLVTQVRKTDDICQIPIVLVGNKRDLRRGRCV 88
Query: 415 SKERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
+K+ + A EY ETSA + NV F
Sbjct: 89 AKDEAREFASEYGCSHYETSALTNRNVHVIF 119
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
D K++ +GD VGKTS L+ + F FI++I D +T+++DGK+ + + DT
Sbjct: 7 DPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTP 65
Query: 218 G 220
G
Sbjct: 66 G 66
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+K++++G GVGK+++ +F F + TI DF + I++D L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 227 RFRTITTAY 253
+F ++ Y
Sbjct: 63 QFASMRDLY 71
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +1
Query: 262 SMGIMLVYDVTNEKSFENIKNWIRNIEEN----ASADVEKMILGNKCDLDSQRQV--SKE 423
++G +V+DVT +F ++ W +++ + + ++L NKCD + V S +
Sbjct: 714 AVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVNNSAQ 773
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAFSL*PGTKSENGKE 546
E A + I + ETSAK+ +NV A +N KE
Sbjct: 774 MDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKE 814
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 154
LFK+L+IGD GVGKTS++ R+ F++ + +T+ +
Sbjct: 671 LFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
D ++++ L+GD GVGKT++L RF F + TI ++ ++I++D V L+I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTA 61
Query: 218 GQ 223
+
Sbjct: 62 SR 63
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+LL++G GKT+IL+ D ++ I TIG + ++ ++ K +K +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 230 FRTITTAY 253
R + Y
Sbjct: 147 IRLLWRLY 154
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Frame = +2
Query: 26 AKTYDCLFKLLLIGD-SGVGKTSILFRFSEDAFNISFIS--TIGIDFKIRTID---LDGK 187
++ D FK++ +GD +G GK +SF TIG+DF + I+ D K
Sbjct: 44 SRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKK 103
Query: 188 K---VKLQIWDTAGQERFRTITTAY 253
K VKLQ WD A ERF +T Y
Sbjct: 104 KDSTVKLQFWDVAEHERFLKMTAVY 128
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+++++G GKT+IL++ +S I TIG F + T+ K V L IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIG--FNVETLQ-PTKNVTLTIWDVGGQDK 76
Query: 230 FRTITTAY----SVVLWELCLSTMLRMRRALKTL 319
R + Y +L+ + S +LRM A + L
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEEL 110
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+K+ ++G GVGKTS+L F F+ + T+ D+ I ++++DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 227 RF 232
F
Sbjct: 72 AF 73
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 230 FRTITTAY 253
R + Y
Sbjct: 74 IRPLWRHY 81
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDTAG 220
+F+++++G GVGKTS++ RF F+ + T+G D +++ L L+I DTAG
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 221 QERF 232
F
Sbjct: 166 SYPF 169
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/79 (22%), Positives = 30/79 (37%)
Frame = +1
Query: 220 SREIPYNNNSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLD 399
S P ++ + +LVY V + S + R I V +++GNK DL
Sbjct: 166 SYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDLV 225
Query: 400 SQRQVSKERGEQLAIEYQI 456
S+ R + Y +
Sbjct: 226 SEELRQSTRAQMRKTNYAV 244
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K+ ++G VGK+S+ +F E F S+ TI F + I G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 230 FRTITTAYSV 259
+ +YS+
Sbjct: 67 YSIFPQSYSM 76
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 59 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 238
+IG GKT+IL+R + +S + T+G F + T+ K + +WD GQ++ R
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLG--FNVETVTY--KNISFTVWDIGGQDKIRA 55
Query: 239 ITTAY 253
+ Y
Sbjct: 56 LWRVY 60
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 238 NNNSIL-RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADV 363
N+ SI G G++LV+D+TN KSF N++ W+ + NAS D+
Sbjct: 75 NSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV-LNASKDL 116
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-----DGKKVKLQIWDT 214
++ ++GDSGVGKTS++ + S TIG +++ D GK L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 215 AGQERFRTITTAYSVVLWELCLSTMLRMRRALKTLR 322
G + + + L L L R++ LR
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLR 103
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+IL++ ++ I TIG F + +++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 230 FRTITTAY 253
R + Y
Sbjct: 74 IRPLWRHY 81
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSE-DAFNISF-ISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 223
KL+L+G+SG GKTS E +A N + T+G+ + ++ DG +++Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 224 ERFR 235
R++
Sbjct: 320 RRYQ 323
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQRQVSKERGE 432
+GS I+L +D++N ++FE I++ W+ + + ++++GNK D+ RQ RG+
Sbjct: 74 QGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSI-RVLIGNKNDIRKTRQDKDRRGK 132
Query: 433 QL 438
L
Sbjct: 133 VL 134
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG--- 220
K++L GD+ VGKTS L +++ + T ++++ +++ +K L +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQN--ELEGTPTAFANYEL-GLEVGSQKFLLDLWDTEGTTE 64
Query: 221 QERFRTIT 244
+R R +T
Sbjct: 65 YDRLRPLT 72
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
KL ++GD VGKT++ + + F +I T + ++DG K + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 230 F 232
F
Sbjct: 68 F 68
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 179 DGKKVKLQIWDTAGQERFRTITTAY 253
+G+ ++L +WDTAGQE F IT AY
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAY 54
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+L L+G GKT+ + + F+ I T+G F +R + V +++WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGN--VTIKVWDIGGQPR 77
Query: 230 FRTITTAY 253
FR++ Y
Sbjct: 78 FRSMWERY 85
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/60 (28%), Positives = 37/60 (61%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 223
+ K+++IG+ GVGK+++ RF F + T+ ++ + ++ G+ V +++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGE 919
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 17 VKMAKTYDCLFKLLLIGDSGVGKTSILFRF 106
+K K D L K+LLIGDS VGKT +L F
Sbjct: 3 MKPRKKQDYLLKVLLIGDSNVGKTKLLLTF 32
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKLQIWDTAGQ 223
F ++++G GKTSIL+R + F +++T+ F + TI K ++ ++WD G+
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFR-EYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGR 76
Query: 224 ERFRTITTAYS 256
E+ R + AY+
Sbjct: 77 EQNRPLWKAYA 87
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
+ +F+L ++G GVGK+S+ R+ ++ F ID GK +++ DTA
Sbjct: 2596 ETMFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTA 2641
Query: 218 GQERF 232
GQE +
Sbjct: 2642 GQEEY 2646
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 35.1 bits (77), Expect = 0.063
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 KMAKTYDCLFKLLLIGDSGVGKTSILFRF-SEDAFNISFISTIGIDFKIRTIDLDGKKVK 196
K+ D ++LL+G GKT+IL SED +I+ T G F I+++ G +
Sbjct: 9 KLKSEKDREMRILLLGLDNSGKTTILKSLASEDVLHIT--PTQG--FNIKSVQSKG-GFR 63
Query: 197 LQIWDTAGQERFR 235
L +WD GQ + R
Sbjct: 64 LNVWDIGGQRKIR 76
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 373 ILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNV 495
+LGNK DL+ R V + LA +K+ ETSA NV
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNV 42
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Frame = +2
Query: 53 LLLIGDSGVGKTSILF----RFSEDAFNISF---ISTIGIDFKIRTIDLDGKKVKLQIWD 211
+L++G GKT++L +F + I F +T+G++ TI VKL WD
Sbjct: 24 ILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITIS----HVKLMFWD 79
Query: 212 TAGQERFRTITTAYSVVLWELCLSTMLRMRRAL 310
GQ+ RT+ V+ ++ ++ L + AL
Sbjct: 80 LGGQQELRTLWDKVEVMSVKILMTRFLPVEEAL 112
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEEN 348
N + + G +LVYDVT+ +SFE + W+ I+++
Sbjct: 3 NEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKD 37
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
FK+ ++G S VGKTS++ + F I TI D+ I ++ DG + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
M + + L ++ + G +GVGKTSI+ RF F+ + T+ D + ++ +G + L
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVE-DCYSKVLNKNGSIMVLN 59
Query: 203 IWDTAGQERF 232
D++G +F
Sbjct: 60 TTDSSGSYQF 69
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Frame = +1
Query: 367 KMILGNKCDLDSQRQVSKER--GEQLAI--------EYQIKFVETSAKDSLNVEYAF 507
K GNK DL+ QR+VS E+ E +A + ++ VETSAKD N+ F
Sbjct: 78 KRASGNKKDLEEQREVSSEQVVKEVMAFAREKGCEGKLNMRQVETSAKDDCNISDVF 134
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/87 (28%), Positives = 39/87 (44%)
Frame = +1
Query: 223 REIPYNNNSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDS 402
+ P +++L + + L+Y VT+ SFE R I++N K I+ DL
Sbjct: 44 KNTPDKVDALLEAANIVYLLYSVTDRASFEEAAWLARRIQQN------KAIVATNKDLKH 97
Query: 403 QRQVSKERGEQLAIEYQIKFVETSAKD 483
QV + G LA E FV+ S +
Sbjct: 98 LSQVLEYEGRFLAQELDGLFVQVSISE 124
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 8 RIVVKMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGI---DFKIRTIDL 178
R ++ A+ Y + KL+L+G GKT+++ R D +T GI +F+++ D
Sbjct: 540 RAKLRSARGYYSM-KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKK-DF 597
Query: 179 DGKKVKLQIWDTAGQERF 232
++ +IWD GQE +
Sbjct: 598 LHREFIFKIWDFGGQEDY 615
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 148
+ LFK+L++GD+ VGKTS + R+ + TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/71 (26%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL--DSQRQVSKERG 429
RG+ ++ YD+T E S + + + ++ + A + +I+G K DL D R++++ G
Sbjct: 294 RGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCKKDLVTDDTREITEAAG 353
Query: 430 EQLA-IEYQIK 459
+LA ++ ++K
Sbjct: 354 MELAKVQNELK 364
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFR--FSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 211
+++++GDS VGKT +L + + + + + +I ++ + I +DGK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCD 74
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 274 MLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQL 438
+L +DVTN SFEN+ W I V M++G K + +R+VSK E++
Sbjct: 101 ILCFDVTNRASFENVASKWFPEI-RLYEKKVPLMLVGLKPNPVEKRKVSKADAERM 155
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +2
Query: 20 KMAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKL 199
K T + + ++G GVGK++ R F + + +++K ++++DG+ + L
Sbjct: 173 KSFMTNNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLAL 231
Query: 200 QIWDTAGQ 223
+ DTAG+
Sbjct: 232 DVLDTAGK 239
>SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 562 SVGR*EWRPQADAERRSQAGDVAVALQRALTPSAHYDPRPSPIL 693
S+GR + + + E++S + A +R +P+AH P P+P++
Sbjct: 37 SLGRSKKKESKNLEKKSSIDEKDAARKRMHSPAAHAPPGPAPVV 80
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNIS----FISTIGIDFKIRTIDLDGKKVKLQIWDT 214
+K++L+GD+GVGK+ ++ R + + + + T G T L + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTA---SNSCHLYLLDT 70
Query: 215 AGQERFRTITTAY 253
+G E +R +T Y
Sbjct: 71 SGLEEYRELTKIY 83
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 193
+++LIG GKTS+ F+ S +ST GI+ T ++D ++V
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVDVEQV 339
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 268 GIMLVYDV--TNEKSFENIKNWIRN--IEENASADVEKMILGNKCDLDSQRQVSKE--RG 429
G +++YDV TN K E+ + + + I + +I+ +KCD D+Q + +E R
Sbjct: 157 GFLVLYDVEATNAKRLEDTQEKVLSAVITYVQKSKRPFVIVASKCD-DTQLSLLQEVYRF 215
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
Q + + VETS ++NV+ AF
Sbjct: 216 AQTK-KLNVPIVETSTYQNVNVDLAF 240
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 442 IEYQIKFVETSAKDSLNVEYAF 507
+++ + F+ETSAK LNV+ AF
Sbjct: 148 MDHNVAFMETSAKTGLNVDLAF 169
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 148
+ ++++G +GVGKT+++ RF F + T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 SGVG-KTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITT 247
SG G KT+IL++ ++ + T+ F + TI K + +WD GQ++ R +
Sbjct: 117 SGRGRKTTILYKLKLKE-TVNTVPTVA--FNVETIS-PCKNITFSVWDIGGQDKIRRLWR 172
Query: 248 AY 253
Y
Sbjct: 173 HY 174
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/42 (26%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKN-WIRNIEENASADVEKMILGNKCDL 396
++ +D+TN SF+N+ W+ + ++ + +++GNK D+
Sbjct: 97 IICFDITNPTSFQNVSTVWVPEL-KHYMPETPVLVVGNKKDM 137
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRF 106
KL ++GD+ VGKT IL+R+
Sbjct: 10 KLKVVGDTNVGKTCILYRW 28
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 53 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 154
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 248 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 280
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAF 121
L+K++ G GVGKTS+ R ++ F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV----KLQIWDTA 217
+++LIG GKTS+ F+ +ST GI+ T ++D ++V +L D A
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVDVEQVSRWQRLCDSDKA 142
Query: 218 GQERFRTITTAYSVVLWEL 274
G +++ ++ EL
Sbjct: 143 GNSNNQSVRALARLIAEEL 161
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 53 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 154
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 78 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 110
>SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 146 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYSV 259
G+ IRT D+ + L++ D G+ER +T YS+
Sbjct: 39 GLHLNIRTADIVNLRTMLELLDVEGEERH--VTLPYSI 74
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 258 TEYAVVIVRNLS*PAVSHICNLTFLPSRSIVRILKSIPIVDIKEMLNASSENLNSIDVFP 79
T A VIVR+++ AVS+ L R + + V + E+ + + I+VF
Sbjct: 2648 TSRATVIVRDITSKAVSNSVALQISDMRKVEYFVGDYHDVVVGELSRMFGVSSSGIEVFS 2707
Query: 78 TPESPIR 58
SPI+
Sbjct: 2708 VQPSPIK 2714
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVK 196
+++LIG GKTS+ F+ +ST GI+ T ++D +VK
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -2
Query: 171 IVRILKSIPIVDIKEMLNASSENLNSIDVFPTPESPIRSNLNKQS*VFAIFTTI 10
+V + S+ IV + + + EN+ +++ TP+S ++ + KQ+ V AI T I
Sbjct: 47 LVDDVNSVKIVTGDVIHDFAGENVKYLELRSTPKSNPKTGMTKQAYVDAILTAI 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,453,203
Number of Sequences: 59808
Number of extensions: 487365
Number of successful extensions: 1483
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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