Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00075
(806 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 162 3e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 158 4e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 139 3e-33
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 99 4e-21
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 83 3e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 70 3e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 62 4e-10
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 32 0.63
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 30 1.9
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 1.9
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.4
SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 3.4
SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7) 29 4.4
SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1) 29 4.4
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 4.4
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 7.7
SB_7925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 7.7
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 7.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 162 bits (393), Expect = 3e-40
Identities = 73/86 (84%), Positives = 83/86 (96%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
I+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ N
Sbjct: 197 IYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPN 256
Query: 435 KRALRRLRTACERAKRTLSSSTQARL 512
KRA+RRLRTACERAKRTLSSSTQA +
Sbjct: 257 KRAMRRLRTACERAKRTLSSSTQASI 282
Score = 149 bits (360), Expect = 3e-36
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 1 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 180
K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLR
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLR 171
Query: 181 IINEPTAAAIAYGLDKKGTGERNVL 255
IINEPTAAAIAYGLDKK ERNVL
Sbjct: 172 IINEPTAAAIAYGLDKKVGVERNVL 196
Score = 123 bits (296), Expect = 2e-28
Identities = 62/89 (69%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +2
Query: 503 SEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQIHDIVLV 676
+ IEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K IHDIVLV
Sbjct: 280 ASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLV 339
Query: 677 GGSTRIPKVQKLLQDFLLMERSSTKSINP 763
GGSTRIPK+QK+LQ+ L + KSINP
Sbjct: 340 GGSTRIPKIQKMLQE-LFGGKELNKSINP 367
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 158 bits (384), Expect = 4e-39
Identities = 74/87 (85%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 431
IFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++
Sbjct: 197 IFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSK 256
Query: 432 NKRALRRLRTACERAKRTLSSSTQARL 512
N RA+RRLRTACERAKRTLSSST+A +
Sbjct: 257 NSRAMRRLRTACERAKRTLSSSTEASI 283
Score = 144 bits (349), Expect = 7e-35
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +1
Query: 1 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 180
KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR
Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLR 171
Query: 181 IINEPTAAAIAYGLDKKGTGERNVL 255
+INEPTAAA+AYGLDK +GE+NVL
Sbjct: 172 VINEPTAAALAYGLDKSLSGEKNVL 196
Score = 116 bits (280), Expect = 2e-26
Identities = 53/87 (60%), Positives = 71/87 (81%)
Frame = +2
Query: 503 SEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG 682
+ IE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH++VLVGG
Sbjct: 281 ASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGG 340
Query: 683 STRIPKVQKLLQDFLLMERSSTKSINP 763
STR+PK+QK+L+++ +S KSINP
Sbjct: 341 STRVPKIQKMLEEY-FSGKSLNKSINP 366
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 155 bits (377), Expect = 3e-38
Identities = 72/86 (83%), Positives = 80/86 (93%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
IFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ N
Sbjct: 290 IFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPN 349
Query: 435 KRALRRLRTACERAKRTLSSSTQARL 512
KRALRRLRTACERAKRTLSSSTQA +
Sbjct: 350 KRALRRLRTACERAKRTLSSSTQASI 375
Score = 134 bits (324), Expect = 8e-32
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = +1
Query: 19 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 198
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 199 AAAIAYGLDKKGTGERNVL 255
AAAIAYGLDKK ERNVL
Sbjct: 271 AAAIAYGLDKKVGQERNVL 289
Score = 117 bits (281), Expect = 1e-26
Identities = 56/88 (63%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = +2
Query: 503 SEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVG 679
+ IEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+VG
Sbjct: 373 ASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVG 432
Query: 680 GSTRIPKVQKLLQDFLLMERSSTKSINP 763
GSTRIPK+Q LLQ+F + KSINP
Sbjct: 433 GSTRIPKIQSLLQNF-FNGKELNKSINP 459
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = +1
Query: 1 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 153
KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 137 KTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 139 bits (336), Expect = 3e-33
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 1 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 180
KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+R
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMR 869
Query: 181 IINEPTAAAIAYGLDKKGTGERNVL 255
IINEPTAAAIAYG+DKK GE+N+L
Sbjct: 870 IINEPTAAAIAYGMDKK-EGEKNIL 893
Score = 112 bits (269), Expect = 4e-25
Identities = 54/98 (55%), Positives = 73/98 (74%)
Frame = +2
Query: 470 EGKEDLVIVHTSEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 649
+ K L H + +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K
Sbjct: 966 KAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKK 1025
Query: 650 AQIHDIVLVGGSTRIPKVQKLLQDFLLMERSSTKSINP 763
++IH+IVLVGGSTRIPKVQ+L++DF + ++ INP
Sbjct: 1026 SEIHEIVLVGGSTRIPKVQQLVKDF-FEGKEPSRGINP 1062
Score = 111 bits (267), Expect = 6e-25
Identities = 48/86 (55%), Positives = 69/86 (80%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ +
Sbjct: 894 VFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKD 953
Query: 435 KRALRRLRTACERAKRTLSSSTQARL 512
RA+++LR E+AKR LS+ QAR+
Sbjct: 954 NRAVQKLRREVEKAKRALSTQHQARV 979
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 105 bits (252), Expect = 4e-23
Identities = 48/83 (57%), Positives = 64/83 (77%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ +
Sbjct: 4 VYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKD 63
Query: 435 KRALRRLRTACERAKRTLSSSTQ 503
AL+RLR A E+AK LSSS Q
Sbjct: 64 SMALQRLREAAEKAKIELSSSVQ 86
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/70 (45%), Positives = 52/70 (74%)
Frame = +2
Query: 554 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFLLM 733
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD +
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQD--IF 165
Query: 734 ERSSTKSINP 763
R +K++NP
Sbjct: 166 GRVPSKAVNP 175
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 99.1 bits (236), Expect = 4e-21
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 26/109 (23%)
Frame = +1
Query: 1 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN--- 171
++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 11 RSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLS 70
Query: 172 ---------------------VLRIINEPTAAAIAYGLDKK--GTGERN 249
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 71 RTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +1
Query: 13 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 192
PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INE
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINE 205
Query: 193 PTAAAIAYGLDKKGTGERNVL 255
PTAAA+AYGL KK G NV+
Sbjct: 206 PTAAALAYGLHKK-EGVANVM 225
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +2
Query: 500 TSEIEIDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 670
T ++ + SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++V
Sbjct: 309 TIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVV 368
Query: 671 LVGGSTRIPKVQKLLQDF 724
LVGGSTR+PK+++L+Q+F
Sbjct: 369 LVGGSTRVPKIRQLIQEF 386
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/90 (35%), Positives = 55/90 (61%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
+ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T
Sbjct: 226 VVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TC 284
Query: 435 KRALRRLRTACERAKRTLSSSTQARLR*IL 524
++RLR E AK L+ + + ++ +L
Sbjct: 285 SEDIQRLRQEVEAAKINLTRTNEVTIKLML 314
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 76.2 bits (179), Expect = 3e-14
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 1 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 180
+ F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR
Sbjct: 169 EVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLR 228
Query: 181 IINEPTAAAIAYGLDKK 231
++N+ TA ++AYG+ K+
Sbjct: 229 LMNDTTAVSLAYGIYKQ 245
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +3
Query: 261 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 440
D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D+ ++ +
Sbjct: 259 DIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIK 318
Query: 441 ALRRLRTACERAKRTLSSST 500
A +L CE+ K+ +S++T
Sbjct: 319 AKIKLGAECEKLKKLMSANT 338
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 470 EGKEDLVIVHTSEI--EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM 643
E + L+ +TSEI I+ E D + + RA+FEEL ADL + P+ +L A+
Sbjct: 328 EKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQS 385
Query: 644 DKAQIHDIV 670
K + ++V
Sbjct: 386 GKYSVKNVV 394
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/70 (45%), Positives = 52/70 (74%)
Frame = +2
Query: 554 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFLLM 733
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD +
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQD--IF 110
Query: 734 ERSSTKSINP 763
R +K++NP
Sbjct: 111 GRVPSKAVNP 120
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 65.7 bits (153), Expect = 4e-11
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +1
Query: 4 TFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 183
TF PEE+ M+L + E + +++ V+TVP +FN ++R+A A + GLNVL+I
Sbjct: 79 TFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQI 138
Query: 184 INEPTAAAIAYGL 222
+N TA A+ YGL
Sbjct: 139 MNSNTAVALNYGL 151
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +2
Query: 512 EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 691
+I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VLVGG R
Sbjct: 267 QIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIR 326
Query: 692 IPKVQKLL 715
+PKVQ L
Sbjct: 327 VPKVQDAL 334
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 321 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSS 494
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 495 STQ 503
+ +
Sbjct: 261 NNE 263
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKK 419
++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR K+K
Sbjct: 158 VYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKI 217
Query: 420 DLATNKRALRRLRTACERAKRTLSSSTQA 506
D TNKR+ +L+T+ E+ K LS+ A
Sbjct: 218 DPLTNKRSKTKLQTSAEQCKNILSTLESA 246
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/30 (36%), Positives = 24/30 (80%)
Frame = +2
Query: 641 MDKAQIHDIVLVGGSTRIPKVQKLLQDFLL 730
+ ++ + ++LVGG+TR PK+Q+LL+++ +
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFV 64
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 228 KGYWRTKCTIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 365
+G K T D G GT VS + +E+G +++ D H+ G F
Sbjct: 1515 EGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 243 TKCTIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 365
T I D G+F VS E+GI ++ GD H+ G F
Sbjct: 1427 TDTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 386 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK--EDLVIVHTSEIEIDSLFE 532
LCP ++ GP +++E S AFA C+ GK E + T+E + LFE
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGKILERFDKLATTECTKEDLFE 256
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 386 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 478
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 255 IFDLGGGTFDVSILTIEDGIFEVK 326
I+DLG GT++++IL E G++ ++
Sbjct: 321 IYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 252 TIFDLGGGTFDVSILTIEDGIFEV 323
++FDLG G+++V L +E G++ V
Sbjct: 310 SVFDLGNGSYEVLFLVMEPGVYRV 333
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 377 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 466
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 259 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 402
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 29.5 bits (63), Expect = 3.4
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +1
Query: 220 LDKKGTGERNVLSLTSAAVPSTCPSLPSRMVSSR*NPPPATPTW-EVRTLTIAWSTTLSR 396
L KK + ++L + V S L + SS + PP TPT T++ STT S
Sbjct: 10 LVKKDSKGGDMLCMAMPPVSSQDELLLTSAASSPSHTPPGTPTTPTTSTVSFLPSTTPSS 69
Query: 397 SSRGNT-------KRTSLPTRELLGVCVLHVR 471
SS+G + KR S T ++ V L ++
Sbjct: 70 SSQGTSSTSKSKKKRKSKKTTPIIAVIALFIQ 101
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 328 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 444
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7)
Length = 1384
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 16 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY--FNDSQRQATKDAGTISGLNVLRIIN 189
EE + + E AY + N + P + + QA +DA + G + L ++
Sbjct: 1206 EEEGEQPVDNIPEGVGAYGAASSINTNLHTPIQGTTGEEKEQAERDADSTGGTSFLAEVD 1265
Query: 190 EPTAAAIAYGLD--KKGTGERN-VLSL-TSAAVPSTCPS 294
+ D +K T + N +LS+ TSAA+P+T PS
Sbjct: 1266 SFVSCEHCESTDLIEKDTADANSLLSIVTSAAMPATFPS 1304
>SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1)
Length = 890
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 16 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY--FNDSQRQATKDAGTISGLNVLRIIN 189
EE + + E AY + N + P + + QA +DA + G + L ++
Sbjct: 327 EEEGEQPVDNIPEGVGAYGAASSINTNLHTPIQGTTGEEKEQAERDADSTGGTSFLAEVD 386
Query: 190 EPTAAAIAYGLD--KKGTGERN-VLSL-TSAAVPSTCPS 294
+ D +K T + N +LS+ TSAA+P+T PS
Sbjct: 387 SFVSCEHCESTDLIEKDTADANSLLSIVTSAAMPATFPS 425
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 34 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 183
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 184 INEPTAAAIAYGLDKKGTG 240
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 262 TSAAVPSTCPSLPSRMVSSR*NPPPATP 345
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 386 LCPGVQEEIQKGPRYQQESS*AFAYCM 466
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_7925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Frame = -3
Query: 774 YGLVGLIDFVE----LLSIKRKSCRSFCTLGIRVEPPTSTI------SWI*ALSILASRR 625
+GL+G +++VE +LS + SC L + PP + S+ +L+++ RR
Sbjct: 539 FGLIGSVEWVEEHSKILSDRSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRR 598
Query: 624 DFSTGSMVDLNRSA 583
D+ + LNR A
Sbjct: 599 DWENPGVTQLNRLA 612
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 386 LCPGVQEEIQKGPRYQQESS*AFAYCM 466
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 515 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 634
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,804,826
Number of Sequences: 59808
Number of extensions: 605949
Number of successful extensions: 4534
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4527
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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