Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0275.Seq
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 32 0.68
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 31 0.90
SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41) 31 1.2
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_43489| Best HMM Match : BB1 (HMM E-Value=3.8) 30 2.1
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 30 2.1
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 30 2.1
SB_32231| Best HMM Match : PRKCSH (HMM E-Value=4.3e-12) 30 2.8
SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_50702| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_48395| Best HMM Match : MAM (HMM E-Value=0) 29 4.8
SB_28908| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 6.4
SB_56221| Best HMM Match : AOX (HMM E-Value=3.6) 29 6.4
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 6.4
SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07) 29 6.4
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 6.4
SB_14526| Best HMM Match : Drf_FH1 (HMM E-Value=0.16) 29 6.4
SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 6.4
SB_2115| Best HMM Match : rve (HMM E-Value=0.091) 29 6.4
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 6.4
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_41308| Best HMM Match : rve (HMM E-Value=6e-12) 29 6.4
SB_38996| Best HMM Match : Pepsin-I3 (HMM E-Value=1.7) 29 6.4
SB_12630| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 28 8.4
SB_28931| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/57 (40%), Positives = 26/57 (45%)
Frame = -2
Query: 742 LRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQPPLG 572
LR P+ + +G F R G P DW PRG P G P P P GP PP G
Sbjct: 367 LRPPLDSMRDMGPGFPPR-GMPPKEDWGPGPRGMGPGMG-PPRPMGPPGP-HGPPFG 420
>SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 252 IQPVPQPNVAGMAPSNLVPCVSNYDDLSCPTSPGQEGDYANYYLTNSANNTIIT 413
++ + P+ + PS++ PCV +Y+ +S PG +GD Y+ + +T
Sbjct: 836 VESLKDPSHSYYQPSSVDPCVYSYNSISASAIPGSDGDRLLRYVPKRQTSGEVT 889
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P +P P SP P PPL
Sbjct: 1111 DTPTRPPETEPGSAEAPEPVSPAKPPSNPPL 1141
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 31.9 bits (69), Expect = 0.68
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -2
Query: 769 DGIQGNPPPLRKP---VKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPL 599
+G G PPP KP + P G P +N P W T P G P P P
Sbjct: 381 NGPGGPPPPWSKPGGILPGPPPPGPPMLNMAPSIP--PWQTTP-------GYIP-PPPPG 430
Query: 598 GPERQPPLGFPLAESPW 548
P+ QPP P +++PW
Sbjct: 431 FPQFQPPPPPPPSDAPW 447
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 31.5 bits (68), Expect = 0.90
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Frame = +3
Query: 510 SHHAQARRTWPMNQGLSAS-GNPKGGCLSGPRGDVGTGETPNSGEVPLGLVGQSLKGLKP 686
+H Q R +G+ GN + G G+ G G P+G++G GL
Sbjct: 126 NHGVQGERGSQGGRGIKGGRGNEGSAGIPGRAGNKG-GRGDRGPVGPVGVIGNP--GLMG 182
Query: 687 IRLTNGAPKGQEALTGLRKGGGFPWIPSRKRWVLQRAGFNLTFARPPKGKLGK 845
I+ + G P G + +TG R G P +K + + P G+ GK
Sbjct: 183 IQGSEG-PYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPGPPGRRGK 234
>SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41)
Length = 901
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 662 PIPQRVETNSIDKRSPQRARSFNRFT*GGRVPLDPIPKTLGASTGRLQFNVCP--PAQR 832
P+PQ VE NS + SPQ SF + T P+ LG+S + N P P QR
Sbjct: 225 PLPQLVEENSQEMYSPQPQESFEQLT-------SPVQSPLGSSLHGVPPNSVPQSPVQR 276
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Frame = +3
Query: 540 PMNQGLSASGNPKGGC----LSGPRGDVGT-GETPNSGEVPL-GLVGQSLKGLKPIRLTN 701
P G+ PKG L GP+G+ G G +GE GL G L+G K R
Sbjct: 1372 PGAPGVDGPTGPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSG--LRGDKGDRGLP 1429
Query: 702 GAPKGQEALTGLRKGGGFPWIPSRK 776
G P G G R GFP IP K
Sbjct: 1430 G-PSGPPGEEGARGSDGFPGIPGSK 1453
>SB_43489| Best HMM Match : BB1 (HMM E-Value=3.8)
Length = 227
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -2
Query: 739 RKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPL 599
RK + S PL P+ NR PLR+WP R T P + P PL
Sbjct: 83 RKHMTPSRPLNIPY-NRGNPGPLREWPFYVRPTYPR-KIGWFPLKPL 127
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 748 PPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTS--PLGPERQPPL 575
PP + P++ +P V +G +P+R+ G +P G PVP P P PP
Sbjct: 481 PPFQSPLQGGS--SSPNVT-LG-SPMRNLSEGFPGGNPLQGSGPVPPPAYPTRPSSNPPN 536
Query: 574 GFPLAESP 551
FP AESP
Sbjct: 537 TFP-AESP 543
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 748 PPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTS--PLGPERQPPL 575
PP + P++ +P V +G +P+R+ G +P G PVP P P PP
Sbjct: 105 PPFQSPLQGGS--SSPNVT-LG-SPMRNLSEGFPGGNPLQGSGPVPPPAYPTRPSSNPPN 160
Query: 574 GFPLAESP 551
FP AESP
Sbjct: 161 TFP-AESP 167
>SB_32231| Best HMM Match : PRKCSH (HMM E-Value=4.3e-12)
Length = 917
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 618 GETPNSGEVPLGLVGQSLKGLKPIRLTNGAPKGQEALTGLRKGGGFPWIPSRK 776
G+ P +PLG+ + KG KP+ NG + G++ GF W P ++
Sbjct: 490 GKPPRRVAIPLGVKPKEPKGYKPLLPANGEEEIPPYELGVKNTKGF-WGPKKE 541
>SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 389 IRQVIVSVIPFLAWGGRAR-KVIVVRDAG 306
+ QV + ++P LAWG + + K + V DAG
Sbjct: 191 LNQVALQIVPVLAWGPKGQVKTVAVLDAG 219
>SB_50702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 664 WPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
WPT P+GT + PT P G ++Q L
Sbjct: 487 WPTQPQGTQQQASQPIQPTQPQGTQQQGTL 516
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 661 PTNPRGTSPEFGVSPVPTSPLGPERQPPLGFP 566
PT P+ T+P +P P PL PE PPL P
Sbjct: 898 PTTPKPTTP----APPPPLPLAPEPPPPLPPP 925
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 546 NQGLSASGNPKGGCLSGPRGDVGTGETPN 632
N ASG GG +G G G G TPN
Sbjct: 314 NATAGASGTAGGGATAGGNGTAGGGGTPN 342
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 333 SCPTSPGQEGDYANYYLTNSANNT 404
S PT PG D N+YLT A++T
Sbjct: 408 STPTDPGTRNDTGNFYLTPIADST 431
>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 679 NPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQPPLG 572
NPL NP G P PT P G + P G
Sbjct: 55 NPLTQEANNPTGQQPNQPTGQQPTDPTGQQPNDPTG 90
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTN--PRGTSPEFGVSPVPTSPLGPERQPP 578
P PL P P+GAP G P+ P+ P GT P G P+ P+GP PP
Sbjct: 2164 PSPLGAPPSVPPPMGAP---PSGPPPMGAPPSGPPPMGTPPS-GHPPMGAPPMGP---PP 2216
Query: 577 LG 572
G
Sbjct: 2217 SG 2218
>SB_48395| Best HMM Match : MAM (HMM E-Value=0)
Length = 901
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 444 GSGPCSSYIDVCCLAPDQRPQQSHHAQARRTWPMNQGLSASGNPKGGCLSGPRGDVGTG 620
G C +D+C A + PQQ+ R T P P GG +GP+GD TG
Sbjct: 702 GPDDCEFEVDMCGWAQELNPQQNKFRWIRWTGP---------TPSGG--TGPKGDHTTG 749
>SB_28908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 602 GRRWNWGDPKFRRSSPGI---GRPIPQRVETN 688
G +WNWGDP+ +P + P+P ++ T+
Sbjct: 12 GAKWNWGDPQGNAYAPVLMHYDAPLPLKLNTD 43
>SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 511
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 459 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 489
>SB_56221| Best HMM Match : AOX (HMM E-Value=3.6)
Length = 361
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 309 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 339
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 965 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 995
>SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07)
Length = 555
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 503 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 533
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 1177 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 1207
>SB_14526| Best HMM Match : Drf_FH1 (HMM E-Value=0.16)
Length = 517
Score = 28.7 bits (61), Expect = 6.4
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Frame = +3
Query: 198 GSGVDH*SDSHLLESPDAIQPVPQPNVAGMAPSNLVPCVSNYDDLSCPTSPGQEGDYANY 377
G G+ L+E P Q VP P V ++ ++++ S + S G E D NY
Sbjct: 130 GQGLKVTKQKPLVEEP---QEVPNPGVE-LSENDVLGYDSK--NASSDQIDGPEHDQTNY 183
Query: 378 Y----------LTNSANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPQQSHHAQA 527
+ N+ N+T + ++V++ + + + A D Q + +A+
Sbjct: 184 HDMDVHLSQEPTANTINSTDTSAVSDVLEPETATATETPNVSDAPAALDTPSQPAVNAEG 243
Query: 528 RRTWPMNQGLSASGNPKGGCLSGPRGDVGTGETPNSGEVP 647
+T P + S+ NP ++ + + ETP S + P
Sbjct: 244 AKTNPSLEPPSSEDNPAAVAMADGAKTITSLETPTSEDTP 283
>SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 425
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 373 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 403
>SB_2115| Best HMM Match : rve (HMM E-Value=0.091)
Length = 345
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 293 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 323
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -2
Query: 748 PPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQPPLGF 569
PP P A P + F + N + + P++ RGT P T RQPP
Sbjct: 107 PPASHPNSAQYPPSSSFGANMPSNQVLNGPSS-RGTPPPGSRQMDQTGASQQTRQPPRSG 165
Query: 568 PLAESPW 548
P + P+
Sbjct: 166 PPVQQPY 172
>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2142
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 679 NPLRDWPTNPRGTSPEFGVSPVPTSPLGPERQPPLGFPLAESP 551
NPL P R S E + SPLG QPP +++ P
Sbjct: 1394 NPLNTHPALVRADSSEEPSNAPKHSPLGSRHQPPPSVDMSQPP 1436
>SB_41308| Best HMM Match : rve (HMM E-Value=6e-12)
Length = 581
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 529 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 559
>SB_38996| Best HMM Match : Pepsin-I3 (HMM E-Value=1.7)
Length = 865
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 542 WPGSPGLGVMGLLRSLVGSQT--ADVDVR*TRATADSDIDDVCP 417
W S +GV GLL SL+G T ++ TR T S DDV P
Sbjct: 637 WSASSVIGVAGLLVSLIGLYTRRRELAAAFTRTTT-SKTDDVTP 679
>SB_12630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 667 DWPTNPRGTSPEFGVSPVPTSPLGPERQPPL 575
D PT P T P + P SP P PPL
Sbjct: 966 DTPTRPPETEPGSAEASEPVSPAKPPSNPPL 996
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 751 PPPLRKPVKASCPLGAPFVNRIGFNPLRDWPTNPRGTSPEFGVSPVPTSP 602
PPP K + S P P + + L +P + RG SP++ V P +P
Sbjct: 275 PPPRLKFSRNSSPALFPASSMCENSSLSFYPASSRGGSPDYDVMPRYETP 324
>SB_28931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1035
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 542 WPGSPGLGVMGLLRSLVGSQT--ADVDVR*TRA-TADSDIDDVCP 417
W S +GV GLL SL+G T ++ TR TA DDV P
Sbjct: 450 WSASSVIGVAGLLVSLIGLYTRRRELATAFTRTPTATEGTDDVTP 494
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,219,934
Number of Sequences: 59808
Number of extensions: 754445
Number of successful extensions: 2768
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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