Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0237.Seq
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_48507| Best HMM Match : TolA (HMM E-Value=1) 32 0.39
SB_25707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 29 2.7
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 28 4.8
SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55) 28 4.8
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_17590| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 27 8.4
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 27 8.4
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 27 8.4
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 4 WEPRQPNAEKTHMQAQTSAIS------NPNIMQMNNIPFSTSLTA--PAENNMPVWELQQ 159
++P +P+ T ++ S S +P+ + P +TS T P+ + P+
Sbjct: 1252 YKPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPI--KPS 1309
Query: 160 PNITGVQESPFRLQLNPTPQTTPMLPN 240
P+ T ++ SP + P+P TTP+ P+
Sbjct: 1310 PSTTPIKPSPSTTPIKPSPSTTPIKPS 1336
>SB_48507| Best HMM Match : TolA (HMM E-Value=1)
Length = 649
Score = 31.9 bits (69), Expect = 0.39
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 1 IWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAEN----NMPVWELQQPNI 168
I E R EKTH+++ TS P+ + T +T+P + N P Q+P +
Sbjct: 520 IKEHRLRTEEKTHLKSTTSPGQEPSTTSSVQV-LITLITSPDKEASALNTP--SDQEPTV 576
Query: 169 TGVQESPFRLQLNPTPQTTPMLPNFQHPPT 258
+ +E+ +PTP TP P+ + PPT
Sbjct: 577 STSEENQPTGTPDPTP--TPQHPSAKPPPT 604
>SB_25707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 233 CQTSNIRPRTNAIPTSVAY-SHTQRPEIFCPAHTMSSAITKLRIYTAAATVTDNTNYT-- 403
C T+N TN+ T+ Y S+T C +T S+ T T NTNYT
Sbjct: 2 CNTTN----TNSTCTTNTYRSNTNYTYSTCTTNTNSTCTTNTYSTCTTNTYRSNTNYTNR 57
Query: 404 SNAXNVY 424
SN N Y
Sbjct: 58 SNTTNTY 64
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +1
Query: 13 RQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQES-- 186
+QP ++T ++ N +P + T + + +QP T +
Sbjct: 186 KQPTTQQTTTNLPSTRQPTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQQTTTTL 245
Query: 187 PFRLQLNPTPQTTPMLPNFQHPPTNKCNT 273
P Q T QTT LP+ + P T + T
Sbjct: 246 PSTKQPTTTQQTTTTLPSTKQPTTPQLTT 274
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTS--LTAPAENNMPVWELQQPNITGVQE 183
P P T + TS +++P+ Q + +T T N+P N
Sbjct: 154 PSLPMQHSTEHHS-TSGVASPSTKQPSTALTTTKQPTTQQTTTNLPSTRQPTTNQQTTTT 212
Query: 184 SPFRLQLNPTPQTTPMLPNFQHPPTNKCNT 273
P Q T QTT +P+ + P T + T
Sbjct: 213 LPSTKQPTTTQQTTTTIPSTKQPTTTQQTT 242
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 37 HMQAQTSAISNPNIMQMNNIPFSTSLTA--PAENNMPVWELQQPNITGVQESPFRLQLNP 210
H QTSA S +M + F S+ E+ +P + Q + +PF + NP
Sbjct: 755 HTTIQTSATSGVAVMCEEGMRFGASMRGYQDQEDVLPQAAIVQDGVPSHPLAPFTSESNP 814
Query: 211 TPQT 222
P+T
Sbjct: 815 RPET 818
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 31 KTHMQAQTSAISNPNIMQMNNIPF---STSLTAPAENNMPVWELQQ--PNITGVQESPFR 195
K HMQ TS I ++M+N F S+S A ++ V +L+ ++T + E+
Sbjct: 1122 KPHMQVSTSRIMLSQSVEMDNAAFIQKSSSNLRHASHSTSVTQLRSHANSVTLILETSPY 1181
Query: 196 LQLNPTPQTTPMLPNFQHPP 255
LQL+ T Q++ + + H P
Sbjct: 1182 LQLSVT-QSSQLTASVMHLP 1200
>SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55)
Length = 1087
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 160 PNITGVQESPFRLQLNPTPQTTPMLPN 240
P+ T ++ SP + P+P TTP+ P+
Sbjct: 265 PSTTPIKPSPSTTPIKPSPSTTPIKPS 291
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 176 YKRVPSDFS*IRHPKQHQCCQTSNIRPRTNAIPTSVAYSHTQRPEIFCPAHTMSSAITKL 355
Y PS S + TS+ T+ T+ S T P++T +++ T
Sbjct: 20 YTSTPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTST--PSYTSTTSYTST 77
Query: 356 RIYTAAATVTDNTNYTS 406
YT+ + T T+YTS
Sbjct: 78 TSYTSTTSYTSTTSYTS 94
>SB_17590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 168 HRSTRESLPTSAESDTPNNTNVAKLP 245
HRSTR LP + ESD P + +P
Sbjct: 385 HRSTRSQLPKARESDIPLVVTLTVVP 410
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 127 ENNMPVWELQQPNITGVQESPFRLQL-NPTPQTTPMLPNFQHP-PTNKCNTDLS 282
E P+ PN+ S F+ +P+P+TTP P++ P P +T S
Sbjct: 432 EEKKPLEAKTTPNVGSGASSAFQKNTPSPSPKTTPSKPSWSRPTPAASASTSPS 485
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 239 TSNIRPRTNAIPTSVAYSHTQRPEIFCPAHTMSSAITKLRIYTAAATVTDNTNYTS 406
T++ P T+ PT+ +Y+ T P++T +++ T YT+ + T T+YTS
Sbjct: 59 TTSYTPTTSYTPTT-SYTPT-------PSYTPTTSYTPTPSYTSTTSYTPTTSYTS 106
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/84 (27%), Positives = 33/84 (39%)
Frame = +1
Query: 25 AEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQL 204
A +T + +T+A P +I F+ T P E P T ES L+
Sbjct: 390 APETTVPTETTAA--PETTVAPDITFAPETTVPPETTGAPDTTLAPETTVSLESTLALES 447
Query: 205 NPTPQTTPMLPNFQHPPTNKCNTD 276
P+TT M P PP + T+
Sbjct: 448 TVAPETT-MAPESTVPPESTVATE 470
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/84 (27%), Positives = 33/84 (39%)
Frame = +1
Query: 25 AEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQL 204
A +T + +T+A P +I F+ T P E P T ES L+
Sbjct: 1459 APETTVPTETTAA--PETTVAPDITFAPETTVPPETTGAPDTTLAPETTVSLESTLALES 1516
Query: 205 NPTPQTTPMLPNFQHPPTNKCNTD 276
P+TT M P PP + T+
Sbjct: 1517 TVAPETT-MAPESTVPPESTVATE 1539
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 118 APAENNMPVWELQQPNITGVQESPFRLQLNPTPQTTPML 234
A E M +WE++ +I V+ +L+ NP P++ M+
Sbjct: 766 ASMERVMLIWEVELTSIPDVESVWIKLRPNPLPRSVSMV 804
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,285,070
Number of Sequences: 59808
Number of extensions: 369385
Number of successful extensions: 1458
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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