Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0232.Seq
(399 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.20
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 29 1.8
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 28 2.4
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 27 4.3
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 27 4.3
SB_42291| Best HMM Match : Tyrosinase (HMM E-Value=0.0014) 27 5.6
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_27633| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0) 26 9.8
>SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 31.9 bits (69), Expect = 0.20
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 52 KEDKATCEV*LLRVKSFQTSLDDYPQIFHR 141
KEDK TCEV L ++SFQ S D +IF R
Sbjct: 479 KEDKKTCEV-LSHIRSFQKSKDFSYRIFER 507
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 31.1 bits (67), Expect = 0.35
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 255 PKAHPKTQPLEQSIPQAPSMKKLFANNHSKGTPFWLSVFQTPPGMNP 395
PK P T P +P A S +A ++S P + Q PPGM P
Sbjct: 331 PKTIPSTLP-PPPVPSATSAPPPWATSNSGPKPLMSTPVQRPPGMRP 376
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 30.7 bits (66), Expect = 0.46
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 245 TLMPKSPSKDPTLGTINSPSPFHEKTVCQQPFQGHTVLAFRVS 373
+++P +PS P+ GT S +P HE P QG T++ S
Sbjct: 383 SMLPNTPSSSPSTGTQPSSTPIHE-----PPTQGTTLVTMETS 420
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 394 GFIPGGV*NTESQNGVPLEWLLANSFFMEGA--WGIDCSKGWVFG 266
G+ GG+ + +G PL + +++ GA WG+ C++G +G
Sbjct: 284 GYGAGGIDACQGDSGGPLVCKEGDVWYLMGAISWGVGCARGGRYG 328
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 354 TVCPWNGCWQTVFSWKGLGELIVPRVG 274
+V W G +V W GLG L+V VG
Sbjct: 810 SVVDWVGLGHSVVDWVGLGHLVVDWVG 836
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 354 TVCPWNGCWQTVFSWKGLGELIVPRVG 274
+V W G +V W GLG +V VG
Sbjct: 640 SVADWVGLGHSVVDWVGLGHSVVDWVG 666
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 354 TVCPWNGCWQTVFSWKGLGELIVPRVG 274
+V W G +V W GLG +V VG
Sbjct: 880 SVVDWVGLGNSVLDWVGLGHSVVDWVG 906
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 354 TVCPWNGCWQTVFSWKGLGELIVPRVG 274
+V W G +V W GLG +V VG
Sbjct: 890 SVLDWVGLGHSVVDWVGLGHSVVDYVG 916
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 212 SKLFVLIGQKHTLMPKSPSKDPTLGTINSPSPFHEKTVCQQPFQGHTVLAFRV 370
SK+ + KHTL K+PS T G + + S F ++ +C+ P + V V
Sbjct: 54 SKIIKIFIGKHTLFIKNPSSPQTKGRLTN-SAFWQR-LCKSPKMDNIVFGIFV 104
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 274 PNPWNNQFPKPLP*KNCLPTTIPRAHRFGFPCFKPPP 384
P+P + P P + PT +P R P PPP
Sbjct: 1556 PDPAERRVSPPFPAERRTPTPVPAERRVSPPSRLPPP 1592
>SB_42291| Best HMM Match : Tyrosinase (HMM E-Value=0.0014)
Length = 406
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 355 NGVPLEWLLANSFFMEGAWGIDCSKG 278
NGVP +W + + F G W + KG
Sbjct: 253 NGVPPDWCVQDGIFRVGNWHMPVVKG 278
>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 26.6 bits (56), Expect = 7.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 319 FFMEGAWGIDCSKGW 275
FFM+G WG C W
Sbjct: 725 FFMDGQWGTVCGDSW 739
>SB_27633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 148 PINVGLANRLFPDSRI 195
P VGL NRL PDSRI
Sbjct: 334 PQPVGLENRLIPDSRI 349
>SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1627
Score = 26.2 bits (55), Expect = 9.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 198 RDTGIWE*SVCEPHVNGAPTM 136
+D +W CEPH N P +
Sbjct: 571 KDKEVWSTDGCEPHTNSTPEL 591
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,736
Number of Sequences: 59808
Number of extensions: 378546
Number of successful extensions: 1152
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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