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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30159.Seq
         (712 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  

>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2916

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2579 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2617



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2586 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2624



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2593 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2631



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2600 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2638



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2607 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2645



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2614 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2652



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2621 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2659



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2628 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2666



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2635 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2673



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2642 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2680



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2649 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2687



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2656 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2694



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2663 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2701



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2670 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2708



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2677 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2715



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2684 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2722



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2691 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2729



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2698 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2736



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2705 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2743



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2712 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2750



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2719 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2757



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2726 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2764



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2733 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2771



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2740 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2778



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2747 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2785



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2754 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2792



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2761 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2799



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2768 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2806



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2775 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2813



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2782 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2820



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2789 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2827



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2796 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2834



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2803 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2841



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2810 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2848



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2817 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2855



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2824 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2862



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2831 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2869



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2838 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2876



 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 409  TIDNRATLLNF*VSNFHLNITESHVILCTIMFRVNSWHY 525
            T+  R   +++ V   H  +   H  +CT+ +RV + HY
Sbjct: 2845 TVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHYRVCTVHY 2883


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,072,959
Number of Sequences: 59808
Number of extensions: 257844
Number of successful extensions: 598
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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