Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30135.Seq
(856 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 1e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 1e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 1e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 1e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 8e-30
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 125 5e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 98 7e-21
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 3e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 6e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 50 2e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 4e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.097
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 33 0.39
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 32 0.52
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.90
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.90
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 1.6
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.8
SB_32794| Best HMM Match : Gam (HMM E-Value=5.8) 30 2.8
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.8
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 30 2.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.8
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.8
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 3.6
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 3.6
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.6
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 29 4.8
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 29 4.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.8
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 4.8
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 29 4.8
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 4.8
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 4.8
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 6.4
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 8.4
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 28 8.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 8.4
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 8.4
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 28 8.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (447), Expect = 1e-46
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSL 509
KMTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSL 143
Score = 128 bits (308), Expect = 8e-30
Identities = 62/78 (79%), Positives = 66/78 (84%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD + LTDYLMKILTERGYSF T
Sbjct: 144 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 689 NAXREIRS*TFKEKLCYV 742
A REI KEKLCYV
Sbjct: 204 TAEREIVR-DIKEKLCYV 220
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (447), Expect = 1e-46
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSL 509
KMTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLSL 142
Score = 125 bits (301), Expect = 5e-29
Identities = 62/78 (79%), Positives = 65/78 (83%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD + LTDYLMKILTERGYSF T
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 689 NAXREIRS*TFKEKLCYV 742
A REI KEKL YV
Sbjct: 203 TAEREIVR-DIKEKLAYV 219
Score = 120 bits (289), Expect = 2e-27
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (447), Expect = 1e-46
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSL 509
KMTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLSL 142
Score = 128 bits (310), Expect = 4e-30
Identities = 63/78 (80%), Positives = 66/78 (84%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD + LTDYLMKILTERGYSF T
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 689 NAXREIRS*TFKEKLCYV 742
A REI KEKLCYV
Sbjct: 203 TAEREIVR-DIKEKLCYV 219
Score = 121 bits (292), Expect = 7e-28
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (447), Expect = 1e-46
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSL 509
KMTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSL 143
Score = 128 bits (310), Expect = 4e-30
Identities = 63/78 (80%), Positives = 66/78 (84%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD + LTDYLMKILTERGYSF T
Sbjct: 144 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 689 NAXREIRS*TFKEKLCYV 742
A REI KEKLCYV
Sbjct: 204 TAEREIVR-DIKEKLCYV 220
Score = 127 bits (307), Expect = 1e-29
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (447), Expect = 1e-46
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSL 509
KMTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSL 143
Score = 123 bits (296), Expect = 2e-28
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 2/30 (6%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYE--GYA 592
YASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 144 YASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 128 bits (308), Expect = 8e-30
Identities = 62/78 (79%), Positives = 66/78 (84%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD + LTDYLMKILTERGYSF T
Sbjct: 106 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTT 165
Query: 689 NAXREIRS*TFKEKLCYV 742
A REI KEKLCYV
Sbjct: 166 TAEREIVR-DIKEKLCYV 182
Score = 121 bits (292), Expect = 7e-28
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 353
AQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +3
Query: 426 NREKMTQIMFETFNTPAMYVAIQAVLSL 509
N + M +IMFETFN+PAMYVAIQAVLSL
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSL 105
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 125 bits (301), Expect = 5e-29
Identities = 60/78 (76%), Positives = 64/78 (82%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLD + LTDYLMK++TERGYSF T
Sbjct: 22 YASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTT 81
Query: 689 NAXREIRS*TFKEKLCYV 742
A REI KEKLCYV
Sbjct: 82 TAEREIVR-DIKEKLCYV 98
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 447 IMFETFNTPAMYVAIQAVLSL 509
IMFE FN+PA+YVAIQAVLSL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSL 21
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 98.3 bits (234), Expect = 7e-21
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YASGRTTG V D GDGVSHTVP+Y+GY LPHA R+D + LT YL +++TERGYSF +
Sbjct: 2188 YASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQS 2247
Query: 689 NAXREIRS*TFKEKLCY 739
A ++I KE LCY
Sbjct: 2248 TAEQQIIR-DLKETLCY 2263
Score = 88.2 bits (209), Expect = 7e-18
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +3
Query: 333 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 509
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++L
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMAL 2187
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 207
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANR 431
A R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NR
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120
Query: 432 EKMTQIMFETFNTPAMYVAIQAVLSL 509
EKM ++MFE + +Y+AIQAVL+L
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLTL 146
Score = 88.6 bits (210), Expect = 6e-18
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YA G TG+V+DSGDGV+H P+YEG+ALPH RLD + +T YL+K++ RGY+F
Sbjct: 147 YAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNH 206
Query: 689 NAXRE-IRS*TFKEKLCYVG 745
A E +R KEKLCYVG
Sbjct: 207 TADFETVR--MMKEKLCYVG 224
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 100 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDE
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDE 60
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/74 (51%), Positives = 56/74 (75%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFIT 688
YA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D + ++ YL +L + G+ F +
Sbjct: 169 YATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHS 228
Query: 689 NAXREIRS*TFKEK 730
++ EI T KE+
Sbjct: 229 SSELEIVR-TIKEE 241
Score = 71.3 bits (167), Expect = 9e-13
Identities = 29/43 (67%), Positives = 38/43 (88%)
Frame = +3
Query: 381 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSL 168
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 470
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 471 PAMYVAIQAVLS 506
PA ++ +VL+
Sbjct: 63 PAFFLCKNSVLT 74
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 506 AYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFI 685
A+A+GR+ G+V+DSG + VP+++GY L AI+R + +T ++ E I
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEETNVEVI 134
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 207
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKIL-TERGYSFI 685
YASG T G+ L SG + IYEG+ L H + L+ LT+ L + L +RG++F
Sbjct: 773 YASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFT 832
Query: 686 TNAXREIRS*TFKEKLCYV 742
+++ +I + KEK+CY+
Sbjct: 833 SSSGWQIVN-DIKEKICYL 850
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 76 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 222
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +2
Query: 527 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDFSRSRLTDYLMKILTERGYSFITNAXREI 706
TG V+DSGDGV+H +P+ EGY + I + + +T ++ ++L ER E
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMET 121
Query: 707 RS*TFKEKLCYVGS*LSKQ 763
T KE+ Y+ ++K+
Sbjct: 122 AK-TIKERWGYICPDIAKE 139
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 285 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 398
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.52
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 527 TGIVLDSGDGVSHTVPI 577
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 204 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 88
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 34.7 bits (76), Expect = 0.097
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 525 PPVSCWTPATVSPTPCPSTRDTHSPT-PSCVWTLAGRDSQTTS*RFSPS--AATRSLPTP 695
P ++ TP T +PTP T TH+PT PS + +QTT +PS A T++ PTP
Sbjct: 13 PTLTKATPQT-TPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTP 71
Score = 32.3 bits (70), Expect = 0.52
Identities = 27/103 (26%), Positives = 38/103 (36%)
Frame = +3
Query: 387 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVPPVSCWTPATVSPT 566
P T P P T +T TP + P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 567 PCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSPSAATRSLPTP 695
T+ T + TP+ + TT +P+A T + PTP
Sbjct: 88 TSTLTKPTPATTPTPTKPTPTAHTPTTP---TPTAHTPTKPTP 127
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 32.7 bits (71), Expect = 0.39
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Frame = +3
Query: 360 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVP 527
E APE V T AP + P+ +T + ET PA A++ +L +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 528 PVSCWTPATVSP--TPCPSTRDTHSPT--PSCVWTLAGRDSQTTS*RFSPSAATRSLPTP 695
+ + TV+P T P+T T P W + T+ +AAT + P
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTWAPETTSAPETTVAPEITAATETTAAP 1442
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 32.3 bits (70), Expect = 0.52
Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Frame = +3
Query: 345 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSLT 512
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 513 RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSPSAATRSLPT 692
PP S P PTP + +P PS + +G + + S A++ +PT
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTPVKAPPPSVFASSSGVPT 394
Query: 693 P 695
P
Sbjct: 395 P 395
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 434
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 451 CSKHSTRPPCTSPSKPCSRLRVRSYHRYRAG 543
C H+ R P T+PS PC + S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 694 GVGNERVAALGENLHEVVCESRP-AKVQTQDGVGECVSLVDGHG 566
G N+R LG +H + S+P A +D + EC GHG
Sbjct: 60 GENNDRQEELGREIHALSSASKPLAGFTARDAIQECREACGGHG 103
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +3
Query: 516 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSPS--AATRSLP 689
P P + +T T S TP PS T S TP+ +T + TTS +PS T P
Sbjct: 30 PSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYTPTTSYTPTTSYTPTPSYTPTTSYTP 88
Query: 690 TPXGKFVREHSRRSCATSALDF 755
TP ++ + TS +
Sbjct: 89 TPSYTSTTSYTPTTSYTSTTSY 110
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 387 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVV---PPVSCWTPATV 557
P L+T PL +T NTP + ++++T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 558 SPTP 569
+ TP
Sbjct: 94 TTTP 97
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 407 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 499
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +3
Query: 387 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVPPVSCWTPATVSPT 566
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 567 PCPSTRDTHSPTP 605
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_32794| Best HMM Match : Gam (HMM E-Value=5.8)
Length = 511
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -1
Query: 676 VAALGENLHEVVCESRPAKVQTQDGVGECVSLVDGHGVGDTVAGVQHDTGGT 521
+ L +LHE + PA Q+ D + +C+ + HG+ D T
Sbjct: 43 IQMLSASLHEQLFPDTPANTQSTDVIQKCIEHLSAHGLWGKAKSAARDVDMT 94
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 174 VPLDRGKAPPSGRDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 347
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 348 TFYN 359
T N
Sbjct: 497 TCPN 500
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +3
Query: 510 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSPSAATRSLP 689
T P + TP T TP T +PT + AG + P+AA + P
Sbjct: 123 TAPTTAATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAP---PPAAAAAAPP 179
Query: 690 TPXGK 704
P GK
Sbjct: 180 PPVGK 184
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +3
Query: 348 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVP 527
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 528 PVSCWTPATVSPTPCPSTRDTHSP 599
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNE 362
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +3
Query: 405 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVPPVSCWTPATVSPTPCPSTR 584
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 585 DTHSP 599
P
Sbjct: 946 QPQPP 950
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 510 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTLAGRDS 638
T P P T TV PT PS D T C W A D+
Sbjct: 1702 TNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSWMQAVNDN 1744
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 29.1 bits (62), Expect = 4.8
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +3
Query: 369 VAPEEHPVLLTEAPL-NPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVPPVSCWT 545
+ PE HP L P + + T T + A Q +L + P +P + T
Sbjct: 118 IHPEVHPGPLPPPPAATARPGNQASTANPLSTPVSTTSTKATQGLLPSSTPEMPETAKPT 177
Query: 546 PATVSPTPCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSPSAATRSLPTPXGK 704
T P+T T +PS T R + + +PS T S T GK
Sbjct: 178 TVVTQVTTMPNTSVTPLTSPSTSVTQRTRPTTPVTQEATPS-QTSSASTSHGK 229
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 517 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGL*PVATHRLPHE 654
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +3
Query: 360 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVP 527
E VAPE L E P+ + +T P VAI++ L+L V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 528 PVSCWTPATVSPTPCPSTRDTHSP 599
+ T TV+P + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
Score = 28.7 bits (61), Expect = 6.4
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Frame = +3
Query: 348 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTR 515
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 516 PVVPPVSCWTPATVSP--TPCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSP 665
P+VP + +TV+P T P T TP+ T A + T +P
Sbjct: 547 PIVPETTVALESTVAPEITVVPET------TPALETTSASESTDATESTVAP 592
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 510 TRPVVPPVSCWTPATV---SPTPCPSTRDTHSPTPSCVWTLAGRDSQTTS*RFSPSAATR 680
T P+ P++ TP T +PT +T T + + + + TTS S + AT+
Sbjct: 393 TAPISDPMTTTTPTTTKATTPTTTKATASTQTAAEANTFLSTQKTDATTSQSTSTTEATK 452
Query: 681 SLPTPXGKFVREHSRRSCATSA 746
S T + + ++ TS+
Sbjct: 453 SQTTKATTTLSTSTTKATTTSS 474
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +3
Query: 510 TRPVVPPVSCWTPATVSPTPCPSTRDTH---SPTPSCVWTLAGRDSQTTS*RFSPSAATR 680
T P PV+ SPTP P T + SP P+ V D+ T +
Sbjct: 115 TSPTPTPVTAKVNVDASPTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVD 174
Query: 681 SLPTP 695
+ PTP
Sbjct: 175 ASPTP 179
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 661 ENLHEVVCESRPAKVQTQDGVGECVSLVDGHGVGDTVAG 545
E LH + E RP D + V++ DG V D VAG
Sbjct: 1480 EALHASLLEKRPLLATAHDSGNKLVAVCDGPRVEDDVAG 1518
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 504 SLTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 614
SLT P + PV+ TP+T T PST D+ T V
Sbjct: 192 SLTSPAIQPVAPATPSTT--TTAPSTADSKETTSPLV 226
>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1059
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Frame = +1
Query: 454 SKHSTRPPCTSPSKPCSRL--------RVRSY--HRYRAGLRRRCLPHRAHLRGIRTPPR 603
S++ TRP TSP+ +R+ +++S+ +RY + C PHRA L + PP
Sbjct: 448 SQNKTRPNYTSPTTNAARIVNEGSKHTKIKSWLLNRYSSSTFNTC-PHRA-LPAWKGPPL 505
Query: 604 HPASGL*PVATH 639
H + P A H
Sbjct: 506 HVDATAKPTACH 517
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 432 EKMTQIMFETFNTPAMYVAIQAV----LSLTRPVVPP-VSCWTPATVSPTPC 572
+K T + F TP++ ++LT P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 501 LSLTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 608
+ TRP VP +T PTP P T P P+
Sbjct: 929 IQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 6.4
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = +3
Query: 348 TFYNELRVAPEEH-PVLLTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTR 515
T E VAPE P T AP + P+ + ET P VA + ++
Sbjct: 532 TVATESTVAPEVTLPPGTTVAPETTVAPETTAAPEITVAPETTEAPDTTVAPETTVAPES 591
Query: 516 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTLAGRDSQTT 647
V P + TV+P S T +P S VW ++ + +TT
Sbjct: 592 TVAPETTVAPETTVAPEITASRETTVAPE-STVWPVSTVEPKTT 634
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 366 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPVVPPVSCWT 545
++A + +P + E N K + +K+ Q M +T + + + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL------LYNMPKIMRKFAFELPNWA 919
Query: 546 PATVSPTPCPSTRDTHSP-TPSCV 614
P PT P+ + T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -1
Query: 586 SLVDGHGVGDTVAGVQHDTGG--TTGRVSESTAWMATY 479
+L GHGV G TGG + GRV+ +W+ Y
Sbjct: 581 TLFSGHGVISASGGAGSGTGGGGSGGRVAAHVSWLREY 618
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 385 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAH--LLHKSPSVPYRPS 212
CS + + C + ++V CS + V + ++C+ + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 211 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 119
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +3
Query: 459 TFNTPAMYVAIQAVLSLTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTLAGRDS 638
T TP++ + QA S+ S + V+P+ ST+ S TPS G S
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPS----TQGMPS 1895
Query: 639 QTTS*RFSPSAATRSLPTP 695
S + +PS A+ + TP
Sbjct: 1896 VAPSTQMTPSVASSTQVTP 1914
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 456 ETFNTPAMYVAIQAVLSLTRPVVPPVSCWTPATVSPTPCPSTRD 587
+ + P + +Q +++ P + P +C TP +SP T D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 510 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 614
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +2
Query: 371 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAY------ASGRTTG 532
R R P PA+ ++R P I H R VR+ RA A ASG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 533 IVLDSGDGVS 562
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 721 ECSR--TNFPXGVGNERVAALGENLHEVVCESRPAKVQTQDGVGECVSLVDGH 569
EC R T P G G + + +C S K +DG EC+ DG+
Sbjct: 343 ECKRGFTPKPNGKGCTDINECDDQAARSLCPSDKTKCMNRDGFFECMCKADGY 395
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,808,374
Number of Sequences: 59808
Number of extensions: 711010
Number of successful extensions: 2842
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 2344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2789
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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