Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0079
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 61 8e-10
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 61 8e-10
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 60 2e-09
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 51 1e-06
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 30 2.3
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_11574| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_33864| Best HMM Match : WD40 (HMM E-Value=2.1) 29 4.0
SB_31241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_56871| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 28 9.1
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 61.3 bits (142), Expect = 8e-10
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Frame = +1
Query: 10 LRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVGFNL 177
L G++NVI+VDW + ++ AV VG+ A L+ L+ L VH++GF+
Sbjct: 139 LWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSF 198
Query: 178 GAHVAGVTGRNLEGK---VARITGLDPSAV 258
GAHVAG GR ++ + + RIT LDP+A+
Sbjct: 199 GAHVAGYVGRRMKKRGRMIDRITALDPAAM 228
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Frame = +3
Query: 276 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCTN--------NLCS 431
+RL T+DA +V+VIHT G+ IGH DF+ NG QPGC N C
Sbjct: 237 VRLDTSDALFVDVIHTSAD----YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCG 292
Query: 432 HNRAYEVFAATI-THGKHYGNQCSTE 506
H RA +F ++ T Y C +E
Sbjct: 293 HKRAPALFTTSLYTKTPLYSYPCRSE 318
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 61.3 bits (142), Expect = 8e-10
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Frame = +1
Query: 1 DAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VHIV 165
D LR + NVI+VDW + Y AV VG+ +A F+K L L ++ H +
Sbjct: 117 DELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSI 176
Query: 166 GFNLGAHVAGVTGRNLE--GK-VARITGLDPSAVIGK 267
GF+LGAH++G G+ L+ G+ + RITGLDP+ ++ K
Sbjct: 177 GFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFK 213
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 204 KKFGRQSSKNYGSRPFGRDWENNV--LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHID 377
K+ GR + G P ++ +RL DAQ+V+VIHT G+ GH+D
Sbjct: 193 KRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS----YVFGITAPHGHMD 248
Query: 378 FFVNGRLVQPGCT 416
F+ NG Q GC+
Sbjct: 249 FYPNGGTSQRGCS 261
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +1
Query: 1 DAFLRSGNYNVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHI 162
D L+ NVI VDW S + L+ Y A VG+ +A + ++ L +VH+
Sbjct: 46 DELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHL 105
Query: 163 VGFNLGAHVAGVTGRNLEGKVARIT 237
+G +LGAHVAG G L GKV RIT
Sbjct: 106 IGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +1
Query: 4 AFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HIVGF 171
A ++ + NVI DWS + Y A VG+ I +K L ++VGF
Sbjct: 635 ALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVGF 694
Query: 172 NLGAHVAGVTGRNLE---GKVARITGLDPSAV 258
+LGAH++G GR + K+ RITGLDP+++
Sbjct: 695 SLGAHISGYVGRRIAKTGQKLNRITGLDPASI 726
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +3
Query: 276 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCTNNL--------CS 431
+RL +DA +V+V+HTD ++ G GHIDF+ NG QPGC + L C
Sbjct: 735 VRLDPSDADFVDVMHTD---MDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICD 791
Query: 432 HNRAYEVFAATIT 470
H RA E +A ++T
Sbjct: 792 HMRAPEYYAESVT 804
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Frame = +3
Query: 276 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGC-------TNNL-CS 431
+RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC +N L C
Sbjct: 16 VRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGCRDIADGPSNALKCD 72
Query: 432 HNRAYEVFAATIT 470
H RA++ F +IT
Sbjct: 73 HVRAHDYFTESIT 85
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +1
Query: 112 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPSAV 258
+ +FL + + K H+ G ++G H+ GV +VA + + P+ +
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAGI 168
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 121 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPSAV 258
FL + + K H+ G ++G H+ GV +VA + + P+ +
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAGI 46
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 160 IVGFNLGAHVAGVTG---RNLEG-KVARITG 240
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_11574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -1
Query: 573 CFTSLAVPISTRNPRQLFAVISLLCCTDFRN-VCHA*LLQQKLHKRDC 433
CF + V +S+R+P + A++ LC + RN + H + + L +++C
Sbjct: 5 CFPLIRVKVSSRDPPYMSALVEHLC--NIRNRIAHKGIRAEILRRKEC 50
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 375 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 509
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_33864| Best HMM Match : WD40 (HMM E-Value=2.1)
Length = 397
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = -1
Query: 639 FCRHHKWNGYLMPVFTRNIPDPCFTSLAVPISTRNPRQLFAVISLLCCTDFRNVCHA*LL 460
FC K N + +F+ P+ + +AV +T + QLF ++ +L D V H +
Sbjct: 191 FCTAFKKNRFY--IFSSRGPEMSWQPMAVGGNTIDRVQLFKLLGVLISCDLTWVAHCDFI 248
Query: 459 QQKLHKR 439
+K +KR
Sbjct: 249 IKKANKR 255
>SB_31241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 202 GRNLEGKVARITGLDPSAVIGKT 270
GR +GK+A I+ LDP+ +GKT
Sbjct: 116 GRTQKGKLASISTLDPAREVGKT 138
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 342 KNGLGIAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 443
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_56871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -1
Query: 576 PCFTSLAVPISTRNPRQLFAVISLLCCTDFRNVCHA*LLQQKLHKRDC 433
PC+T L + S PR VI L +R CH L+ Q L R C
Sbjct: 93 PCYTDLVMQTSLYRPRHTDLVIQTL---SYR-PCHTDLVIQSLSYRPC 136
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -2
Query: 659 TENFVLSFVGITNGMGTSCRYLLGTFQTHALQ-VWQYPFQ--LEILGNYLRLS 510
+E FV +TN M T+C+ + H + VW+Y +E LGN +RL+
Sbjct: 394 SERMTALFVKVTNQMITACKNYI---TEHGYKNVWEYTHSELIEKLGNCIRLN 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,543,419
Number of Sequences: 59808
Number of extensions: 454184
Number of successful extensions: 1250
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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