Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0075
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 54 9e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 54 1e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 52 4e-07
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 50 1e-06
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 50 2e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 50 3e-06
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 50 3e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 49 4e-06
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 48 6e-06
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 48 1e-05
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 47 2e-05
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 46 2e-05
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 46 4e-05
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 45 7e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 44 1e-04
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 43 3e-04
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 43 3e-04
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 42 5e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 42 7e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 41 0.001
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 39 0.004
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.014
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.025
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 36 0.025
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 36 0.044
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11) 35 0.058
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.058
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 34 0.13
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.2
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 29 2.9
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 29 5.1
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 28 6.7
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +3
Query: 87 VDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVA 251
V ++ RIV G A PG P A LR T G CGGS++H WV+TAAHC++
Sbjct: 384 VSSSTSRIVGGAAANPGDWPWQAQLRT---TTGFPYCGGSLIHSNWVLTAAHCIS 435
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G +A PG P A LR GG F CGG++VH +WVITAAHCV
Sbjct: 139 RIVGGTKAPPGAWPWQAMLR--SNYGGQF-CGGTLVHPQWVITAAHCV 183
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFA-CGGSIVHREWVITAAHCVAG 254
R+++G +AT P +LRM+ G + CGGS++ EWV+TAAHCVAG
Sbjct: 37 RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAG 87
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +3
Query: 96 TNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGAS 260
T R++ G +A PG P AL+ + G F CGGS+V WV+TAAHCVA +S
Sbjct: 473 TQSRVIGGKDAIPGAWPWQIALK----SRGNFICGGSLVSSTWVVTAAHCVARSS 523
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G +A G+ P A L P G CGG++VH +WV+TA+HC+
Sbjct: 210 RIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCI 257
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +2
Query: 377 NDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGVSGRMVLLPR-S*TGY 553
ND++L+RL +P + TRY+QP+ + +F G + +G G P
Sbjct: 307 NDVALIRLAKPAIRTRYVQPVCLADGTVSFP--PGTECWITGWGRLHSGGASPEILQQAK 364
Query: 554 TCVLSPTRLAPSTSAPDYAECDLRRFFNVTSQSTCQGHSGGP 679
T +LS + S A V TCQG SGGP
Sbjct: 365 TKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGGP 406
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G + G +P H +R GG ACGGS++ +WV+TAAHCV
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRK----GGHVACGGSLISEKWVLTAAHCV 150
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 90 DTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
D+ + R+VSG +AT G+ P A L V P G F CGGS++ +WV+TA HC+
Sbjct: 56 DSASSRVVSGDDATLGEWPWQAWLH-VTPHG--FVCGGSLIAPQWVLTAGHCI 105
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGAS 260
RIV G A P A LR T G CGGS++H +W++TA HCV+G S
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRT---TSGFPYCGGSLIHPQWILTATHCVSGKS 101
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G EA P A LR GG CGGS++H EWV+TAAHC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCL 303
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G EA P A LR GG CGGS++H EWV+TAAHC+
Sbjct: 219 RIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCL 263
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVA 251
RIV G A G P A LR T G CGGS++H +WV+TA HCV+
Sbjct: 663 RIVGGTAAKQGDWPWQAQLRS---TSGFPFCGGSLIHPQWVLTATHCVS 708
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 183 GVFACGGSIVHREWVITAAHCVAGAS 260
G F CGGS+V WV+TAAHC+AG+S
Sbjct: 89 GSFICGGSLVSPTWVVTAAHCIAGSS 114
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = +3
Query: 96 TNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
T RIV G EA PG P AL M G CGGS+V+ WV+TA HC
Sbjct: 50 TRKRIVGGVEAAPGAWPWQVALLM----NGTQFCGGSLVNENWVVTARHC 95
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +3
Query: 81 KDVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
+D RIV G EA G P AA+ + G F CGG+++ R+WV+TAAHC
Sbjct: 715 RDSSDKRFRIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHC 765
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 72 DINKDVDTTNLRIVSGWEATPGQHPHHAALRM--VDPTGGVFACGGSIVHREWVITAAHC 245
+ +K + LRI G ++ PG +P AL F CGG+++ +WV+TAAHC
Sbjct: 1149 ETSKPTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Query: 246 V 248
V
Sbjct: 1209 V 1209
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +3
Query: 96 TNLR--IVSGWEATPGQHPHHAALRMVDPTGGVFA-CGGSIVHREWVITAAHC 245
TNLR IV G EA G P + D +G CGG++++REWV+TAAHC
Sbjct: 121 TNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +3
Query: 99 NLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
N RIV G A G P A LR + G CGG++VH WV+TA+HCV
Sbjct: 246 NSRIVGGTTAQRGAWPWQAMLRYYN---GNHFCGGTLVHPRWVVTASHCV 292
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
R+VSG E P P L + CGG+++ REWV+TAAHCV
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCV 90
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
R++SG EA G+ P A L + TG F CGGS+V WV+TAAHC+
Sbjct: 31 RVISGSEALLGEWPWQAWLHL-QHTG--FICGGSLVAPGWVLTAAHCI 75
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 99 NLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
N RIV G A G P A LR T G CGGS++ +W++TA HCV
Sbjct: 8 NTRIVGGTAAKHGDWPWQAQLRT---TSGFPYCGGSLIAPQWILTATHCV 54
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRM-VDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G A P A L+ +D T CGGS+++REWV+TAAHC+
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDT---IVCGGSLINREWVVTAAHCI 477
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV-AGASRW 266
RI+ G +T QHP A+ M+D ACGGS+V +W++TAAHC + RW
Sbjct: 40 RIMGGQRSTIEQHPWMVAM-MLDSAQ---ACGGSLVPEDWIVTAAHCFDSNRLRW 90
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3
Query: 93 TTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
T RIV G E+ G P AAL + G CGGS++ +WV+TAAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGASRWSF 272
R+++G A P P +LR P G +CGG+++ WV+TA+HCV R S+
Sbjct: 29 RVINGQNAQPHSWPWQISLR---PYGRYHSCGGTLISDRWVVTASHCVHKNPRPSY 81
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGASRWS 269
RIV+G EA P A+LR CG +++ W ITAAHCV +++
Sbjct: 325 RIVNGQEAVSHSWPWIASLRK--GRSNYHTCGATLIRPGWAITAAHCVMRPDKYT 377
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAG 254
RIV G EA P A L + P G F CGGS++ WV+TAAHC+ G
Sbjct: 29 RIVGGTEAPINGWPWQAML-LRSPNGDQF-CGGSLIDPGWVLTAAHCLVG 76
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 99 NLRIVSGWEATPGQHPHHAALRMVDP--TGGVFACGGSIVHREWVITAAHCVA 251
N RIV G A G P ++ V T CGGS+V EW++TAAHC A
Sbjct: 101 NTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFA 153
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RI++G A P P +LR G CGGS++ WV+TAAHC+
Sbjct: 105 RIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAAHCI 149
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAA 239
RI++G A P P +LR G CGGS++ WV+TAA
Sbjct: 428 RIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAA 469
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G A PG P L + +G F CGG++V EWVITAAHCV
Sbjct: 630 RIVGGSTAPPGAWPWQVML--IYNSGRQF-CGGTLVTPEWVITAAHCV 674
Score = 36.7 bits (81), Expect = 0.019
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = +2
Query: 260 TVVIRAGVTNLTTPEYISEST----EWYNYTTYDDTRPNLVQPNDISLLRLHRPVVFTRY 427
++ +R G + T+P+ E +N+ Y + + NDI+LLRL RP + T
Sbjct: 681 SIQVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRS---SNDIALLRLSRPTILTHR 737
Query: 428 LQPIRVQSSADAFRNYDGLTVYASGHGVSGRMVLLPRS*TGYTCVLSPTRLAPSTSAPDY 607
+ + + F N G Y +G G P + V TR S P
Sbjct: 738 INLACMPNDTVHFPN--GTMCYITGWGTLSSGGSQPEA-LNQAVVPLRTRSECERSYPGK 794
Query: 608 AECDLRRFFNVT-SQSTCQGHSGGP 679
D+ N TCQG SGGP
Sbjct: 795 ISADMICAGNPEGGVDTCQGDSGGP 819
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
R+V+G A P +LR T G CGGS++ EWV+TAAHCV
Sbjct: 37 RVVNGANAPQHAWPWQISLR----TNGQHICGGSLITPEWVLTAAHCV 80
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RI+ G A P P A + + CGG+++ EWV+TAAHCV
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCV 331
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAG 254
R++ G +A P P +LR+ G CGG+++ +WV+TA HCV G
Sbjct: 435 RVIGGEDAAPHSWPWQISLRV----RGKHMCGGTLISPDWVLTAGHCVHG 480
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVF-ACGGSIVHREWVITAAHCV 248
RI++G A P P +LR G F CGG+++ WV+TA+HC+
Sbjct: 845 RIINGQNAQPHSWPWQISLRQ----GRRFHLCGGALISDRWVVTASHCI 889
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
R+V+G A P +LR+ G CGGS++ ++WV+TAAHCV
Sbjct: 31 RVVNGDNAQQHSWPWQISLRV----NGRHICGGSLIAKDWVVTAAHCV 74
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 102 LRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
+RIV G EA P P ++R+ G CGGS++ W++TAAHCV
Sbjct: 29 VRIVGGDEAVPHSWPWQVSIRLK----GSHICGGSLLSPLWLLTAAHCV 73
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
R++ G A P P ++ M G + +CGG+++ +WVITAAHCV
Sbjct: 476 RVIGGEAARPYSWPWQVSVSM----GKLHSCGGALISSKWVITAAHCV 519
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
R+V G EA GQ P AL CGG++VH WV+T AHC
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQ----YCGGALVHERWVVTGAHC 70
Score = 34.7 bits (76), Expect = 0.077
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +2
Query: 272 RAGVTNLTTPEYISESTEWYNYTTYDDTRPNLVQPNDISLLRLHRPVVFTRYLQPIRVQS 451
R GV ++T E+ W+ T DT P DI+L+ L RPVVF ++QPI +
Sbjct: 100 RRGVKSITVHEHYKSM--WFEGIT--DTPPMF----DIALIELDRPVVFNFHVQPICIMR 151
Query: 452 SADAFRNYDGLTVYASGH 505
+F+ + GH
Sbjct: 152 PNISFKWNTACFISGWGH 169
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
R+V+G A P +LR+ G CGGS++ EWV+TAAHCV
Sbjct: 80 RVVNGDNAAQHSWPWQISLRV----NGRHICGGSLITPEWVLTAAHCV 123
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGAS 260
RI++G EA P P +LR+ G CG S++ W +TAAHCV +S
Sbjct: 85 RIINGEEAVPNSWPWQLSLRVY----GSHNCGASLLSPGWALTAAHCVQRSS 132
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
RIV G EA+P P L + G CGGS++ ++WV+T+ HC
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHC 292
Score = 30.3 bits (65), Expect = 1.7
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3
Query: 195 CGGSIVHREWVITAAHC 245
CGGS++ W++T++HC
Sbjct: 15 CGGSLIDPYWILTSSHC 31
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%), Gaps = 4/29 (13%)
Frame = +3
Query: 195 CGGSIVHREWVITAAHCVA----GASRWS 269
CGGSIV+ +W++TAAHCV GASR++
Sbjct: 1809 CGGSIVNSQWIVTAAHCVTTKPPGASRYT 1837
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RI+SG +A P P + ++ G CGG++V +WV+TAAHCV
Sbjct: 351 RIISGSDAQPNSWPW---MVQINYNNG-HHCGGTLVSPQWVVTAAHCV 394
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
RIV G A P A LR G CGG++VH +V+TA+HC+
Sbjct: 23 RIVGGTAAPKNAWPWQAQLRSAS---GFPFCGGTLVHPRFVVTASHCI 67
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
RIV G EA P + + P CGGS++ W++T++HC
Sbjct: 245 RIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC 291
Score = 35.1 bits (77), Expect = 0.058
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 195 CGGSIVHREWVITAAHCV 248
CGGSI+ WV+TA HCV
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 147 HHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
+HA + +V G CGGS++ ++WV+T+ HC
Sbjct: 546 YHAQVDLV-VNGTRHNCGGSLIDKQWVVTSGHC 577
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 93 TTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
T LRIV+G +A P P + R G CG S++ W +TAAHC+
Sbjct: 236 TPPLRIVNGEDAVPHSWPWQLSFRYK----GSHICGASLLTPGWALTAAHCL 283
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 37.1 bits (82), Expect = 0.014
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +2
Query: 377 NDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGVSGRMVLLPR-S*TGY 553
+DI+L+RL +PV FT Y++PI + S+A + V + G R + R + +
Sbjct: 209 SDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQA-NVSGTISGWGKRKLWRDRVANRLH 267
Query: 554 TCVLSPTRLAPSTSA-PDY---AECDLRRFFNVTSQSTCQGHSGGPSS 685
+ + A PDY A F N + CQG SGGP S
Sbjct: 268 EATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFS 315
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 108 IVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
I+ G A G+ P ++++ + + CGG+++ WV+TAAHCV
Sbjct: 546 IMGGANAEHGEWPWQVSMKL-NSSSLPHICGGNVISPWWVLTAAHCV 591
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 380 DISLLRLHRPVVFTRYLQPIRVQSS 454
D +LL+L RP+ FT+Y+QP+ + S
Sbjct: 637 DYALLKLTRPLNFTQYVQPVCLPDS 661
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 84 DVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 248
+ D NL GW+ AL + C G++V +EW++T AHC+
Sbjct: 656 EADLANLAATPGWQPAHANSWPWTALLHFGGFLDIEGCMGTLVDQEWIMTTAHCL 710
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 105 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
RIV G ++ G P AL + D C GS++ W+ITA HC
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLNDRQ----VCAGSLIEARWIITAGHC 95
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 108 IVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 245
I+ G +A G+ P +L + G V CGG+++ EWV+TAA C
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLTH-YGPV--CGGTLLTSEWVLTAARC 300
>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
Length = 439
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 251 RSITVVIRAGVTNLTTPEYISESTEWYNYTTYDDTRPNLVQPNDISLLRLHRPVVFTRYL 430
R + + V +L + +S E + D R LVQP D+ +LR++ ++ Y
Sbjct: 197 RGLVPIREVRVGDLVVTRHEGDSPEVTHLRRVDQVRKKLVQPKDLVVLRVNDEDIWVTYN 256
Query: 431 QPIRVQSS 454
P+ VQ++
Sbjct: 257 HPLYVQAT 264
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 183 GVFACGGSIVHREWVITAAHCV 248
G CGGS++ WV+TAAHCV
Sbjct: 336 GHHICGGSLLSSTWVLTAAHCV 357
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 341 TYDDTRPNLVQPN-DISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGV 511
T + R V P+ D++LLRL P FT Y+ PI + FR G Y +G GV
Sbjct: 65 TVEGHRARHVPPDYDVALLRLATPAKFTNYVYPICLLPQGARFR--PGKYCYVTGWGV 120
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 33.5 bits (73), Expect = 0.18
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 195 CGGSIVHREWVITAAHC 245
CGG+++ +WV+TAAHC
Sbjct: 1266 CGGALIAADWVLTAAHC 1282
>SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 31.1 bits (67), Expect = 0.95
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 24 LCGQSLSQKVKPYFIEDINKDVDTTNL 104
LCGQ LS+K++PY ++ ++ D T +
Sbjct: 161 LCGQKLSRKIEPYIVQVVDSFKDYTRV 187
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 380 DISLLRLHRPVVFTRYLQPIRVQSS 454
D +LL+L RP+ FT+Y+QP+ + S
Sbjct: 388 DYALLKLTRPLNFTQYVQPVCLPDS 412
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 195 CGGSIVHREWVITAAHCV-AGASRWSFAPALR 287
C G+++ R+ V+T+AHCV G S ALR
Sbjct: 168 CSGTLISRQHVLTSAHCVHNGKSYLQRTSALR 199
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 195 CGGSIVHREWVITAAHCVAGAS 260
C G++V WV+TAA C+ +S
Sbjct: 52 CSGALVSPRWVVTAASCLKQSS 73
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 33 QSLSQKVKPYFIEDINKDVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGG 185
+ + K P +ED + T++ S W PG +PHHA L P GG
Sbjct: 144 EGCANKPHPLGMED--GSIQNTSITASSHW-IEPGHNPHHARLNN-QPVGG 190
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 46 KKSSPTSLKISTKM*IPQISVLYLVGRRLPVSTPTTPPS 162
K+S+ SLKI T + + + VG +LP TPP+
Sbjct: 587 KRSALRSLKIGTPETLAPVHIYNRVGPKLPEGATVTPPT 625
>SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 396 DSIDRSSLPDTSSQFVCNRRLMPSGTTTDSPCMPAVMVSLD 518
+S DR + PDT + F R P TT +SPC P V L+
Sbjct: 361 ESSDRLN-PDTQNDFSPERTASPLDTTENSPC-PTVSDRLE 399
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 186 VFACGGSIVHREWVITAAHCVAGASRWSFAP 278
V C G+++ VITAAHC+ +W +P
Sbjct: 150 VMQCSGTLIGPCHVITAAHCIHN-GKWFVSP 179
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 1/102 (0%)
Frame = +2
Query: 377 NDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGVSGRMVLLPRS*TGYT 556
+DI+LLRL RP+ + + + D R GL Y +G G + P +
Sbjct: 28 HDIALLRLARPLAVDKKVSTACLPQQGD--RANPGLKCYITGWGRYHSTITNPAKSLRQS 85
Query: 557 CVLSPTRLAPSTSAPD-YAECDLRRFFNVTSQSTCQGHSGGP 679
V + + Y + + S C G SGGP
Sbjct: 86 LVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNGDSGGP 127
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,381,573
Number of Sequences: 59808
Number of extensions: 614834
Number of successful extensions: 1672
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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