Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30119
         (673 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21302| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-27)         32   0.48 
SB_29786| Best HMM Match : I-set (HMM E-Value=0)                       31   0.64 
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_4317| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.4  
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_2213| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8e-26)          29   3.4  
SB_10463| Best HMM Match : Peptidase_A17 (HMM E-Value=3.6e-07)         29   4.5  
SB_44547| Best HMM Match : 7tm_1 (HMM E-Value=7.9e-11)                 28   6.0  

>SB_21302| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-27)
          Length = 1290

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +1

Query: 391  EKLLPRVVEANRNEVFHREIYNELGELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSS 570
            E  LP+ VE  R+ V HRE+   + EL + G    G    GVS   Y ++T+E  GV+  
Sbjct: 852  ENSLPQRVEVPRSLVTHREVIKSI-ELHSFG----GASAQGVSACVYAVVTQE-SGVNQG 905

Query: 571  YRSA 582
              +A
Sbjct: 906  LVAA 909


>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
          Length = 6300

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 463  GELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSSYRSAMS 588
            G+     CT+KGY    + +   GL  +E + + S+Y  A+S
Sbjct: 3367 GQTATFECTVKGYPRPSIEWFKNGLPLKENERIASTYEGALS 3408


>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1411

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = -3

Query: 425 LFASTTRGNNFSLQ*ALNESRTAFSSSWSCPSKLNGSTQSKVTFAFLEYVVDNALML 255
           + ASTT+G    ++ A+  +RTAF  SW   SKL G  +++  ++   +V  +A ++
Sbjct: 669 VLASTTQGETQDIEDAVKAARTAF-QSW---SKLPGHARARHLYSIARHVQKHARLI 721


>SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 740

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
 Frame = -3

Query: 365 RTAFSSSWSCPSKLNGSTQSKVTFAFLEYVVDNALML--------FDLYIVESIYLEVND 210
           R AF  SW+    L  S  + V+ AF +YVV+              DL I+E +   V  
Sbjct: 323 RVAFLFSWTSTILLKPSQIAIVSLAFGQYVVEPFFPTCSGFDPDRLDLKILEKLLAAVCI 382

Query: 209 TIITHIQCF 183
            +IT++ CF
Sbjct: 383 GVITYVNCF 391


>SB_4317| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 259 IRALSTTYSRNAKVTFDWVDP 321
           +R+L+  Y  N K++F WVDP
Sbjct: 51  VRSLAKAYKSNEKLSFVWVDP 71


>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1258

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +1

Query: 391 EKLLPRVVEANRNEVFHREIYNELGELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSS 570
           E  LP+ VE  R+ V HRE+   + EL + G         GVS   Y ++T+E  GV+  
Sbjct: 715 ENSLPQRVEVPRSLVTHREVIKSI-ELHSFG----DASAQGVSACVYAVVTQE-SGVNQG 768

Query: 571 YRSA 582
             +A
Sbjct: 769 LVAA 772


>SB_2213| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8e-26)
          Length = 840

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +1

Query: 391 EKLLPRVVEANRNEVFHREIYNELGELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSS 570
           E  LP+ VE  R+ V HRE+   + EL + G         GVS   Y ++T+E  GV+  
Sbjct: 403 ENSLPQRVEVPRSLVTHREVIKSI-ELHSFG----DASAQGVSACVYAVVTQE-SGVNQG 456

Query: 571 YRSA 582
             +A
Sbjct: 457 LVAA 460


>SB_10463| Best HMM Match : Peptidase_A17 (HMM E-Value=3.6e-07)
          Length = 287

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +1

Query: 391 EKLLPRVVEANRNEVFHREIYNELGELGALGCTIKGYGCAGVSYVTYGLITRELDGVDSS 570
           E  LP+ VE  R+ V HRE+   + EL + G         GVS   Y ++T+E  GV+  
Sbjct: 19  ENSLPQRVEVPRSLVTHREVIKSI-ELHSFG----DASVQGVSACVYAVVTQE-SGVNQG 72

Query: 571 YRSA 582
             +A
Sbjct: 73  LVAA 76


>SB_44547| Best HMM Match : 7tm_1 (HMM E-Value=7.9e-11)
          Length = 332

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -1

Query: 655 VFLFLVFSSGTYKSNPLPNYSAHSSLIYKRSQRHLVL 545
           VF+ L+F+ GT  + PLP++++H    YK  +   +L
Sbjct: 150 VFILLLFAWGTAIAAPLPSFASHLLGDYKSYRAFQIL 186


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,351,835
Number of Sequences: 59808
Number of extensions: 384337
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)