Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30065
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 31 0.68
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 30 2.1
SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5) 30 2.1
SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_28079| Best HMM Match : MCPsignal (HMM E-Value=0.00064) 30 2.1
SB_26882| Best HMM Match : MCPsignal (HMM E-Value=0.00063) 30 2.1
SB_15509| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_54212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 29 3.6
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 29 3.6
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 3.6
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.8
SB_16308| Best HMM Match : MSSP (HMM E-Value=5) 29 4.8
SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06) 28 6.3
SB_12293| Best HMM Match : OATP (HMM E-Value=0) 28 6.3
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069) 28 6.3
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 28 6.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 6.3
SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_47814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_18064| Best HMM Match : CBM_6 (HMM E-Value=3) 28 8.4
SB_59101| Best HMM Match : PT (HMM E-Value=0.026) 28 8.4
SB_56403| Best HMM Match : fn3 (HMM E-Value=1.5e-29) 28 8.4
SB_18557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 28 8.4
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 28 8.4
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.9 bits (69), Expect = 0.51
Identities = 32/137 (23%), Positives = 59/137 (43%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
TTS+ TKA+P +T S T A T V + P + ++P P+T+
Sbjct: 937 TTSVPETKAAPKTTV--SAETTAAPET-TVGQETTLAPETTAAPETTMAPDTTAAPVTT- 992
Query: 351 TLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPEVEESM 530
++ +T + PET+ A + + P + +T ++ T TL+ + V E+ +
Sbjct: 993 SVPETTAAPETTAAPETTAAPETTVEPET---TLAPETTAAPETTLAPETTVAREITTAP 1049
Query: 531 TSKPLGMQS*PAVTLVS 581
+ + + P T S
Sbjct: 1050 VTTSVSETTAPPETTAS 1066
Score = 31.9 bits (69), Expect = 0.51
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Frame = +3
Query: 144 LVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPI--YLPVS 317
L P + TS+ P +P T K T TM P+ ++P+ +P +
Sbjct: 1304 LAPKTTAEPETSVAPETTAPLETTKALETTVAPETTMAPDTTMEPETT-VAPVTTVIPET 1362
Query: 318 PVMP---VQPL------TSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
V P V P T + +T+TA+GPET+ AS+ P + ++ ++ T+
Sbjct: 1363 TVAPDTTVAPKSTTLASTVVPITETAAGPETTLASETTMAPKTTLAPES---TVAKKTTM 1419
Query: 471 VNSDTLSDQPWVVP 512
+ T++ + V P
Sbjct: 1420 SSETTMAQETTVAP 1433
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 31.5 bits (68), Expect = 0.68
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +3
Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPL 341
V TTS+ T A P +T T P T K + P S P P
Sbjct: 1853 VADTTSVAETAALPKTTAVPE-TTTPPETT--AKPETTGAPETTSAPKTTAVPEATAAPE 1909
Query: 342 TSLTLTQTASGPETSPASDNLSVPSSDTWDKT*IL--SINSSLTLVNSDTL-SDQPWVVP 512
T+ + +T + PET+ A + SVP + + +T L + S T DT + + VP
Sbjct: 1910 TT-SAPETTAAPETTSAPETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVP 1968
Query: 513 E-VEESMTSKPLGMQS*PAVTLVS 581
E + T+ G + P T VS
Sbjct: 1969 ETIAAPETTTVPGTTAVPGTTAVS 1992
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +3
Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347
GTTS+ T A+P +T P T K P+ L I +P P T+
Sbjct: 2882 GTTSVPKTTAAPETTAVPKTTAAP-ETTPLPKTTAAPETTTLPKI--TAAPETTAVPKTT 2938
Query: 348 LTLTQTASGPETSPASDNLSVPSSDTWDKT 437
+T S P+T+ A + SVP + +T
Sbjct: 2939 AA-PETTSVPKTTAAPETTSVPKTTAAPET 2967
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 31.5 bits (68), Expect = 0.68
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Frame = +3
Query: 144 LVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA--RATMQVKHQRWPKPPELSPIYLPVS 317
LVP + V T++ P T R +T + AT Q K P +S
Sbjct: 1702 LVPETTVAPDTTVAPETTVVPETTMRPPKTDVSVTEATKAPVDQLKTKQPTISTAKTTAE 1761
Query: 318 PVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*I---LSINSSLTLVNSDTL 488
P + V P T++ PET+PA + S P S ++ + +++ TL T
Sbjct: 1762 PEITVAPETTVV-------PETTPALETTSAPESTAATESTVAPETTVSQETTLAPETTA 1814
Query: 489 SDQPWVVPEVEES 527
+ + V PE ++
Sbjct: 1815 APETTVAPETTDA 1827
Score = 29.1 bits (62), Expect = 3.6
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Frame = +3
Query: 144 LVP*SHVHGTTSMTP-TKASPSSTFKRS*RTWPA-RATMQVKHQRWPKPPELSPIYLPVS 317
LVP + V T++ P T P +T AT Q K P ++
Sbjct: 1946 LVPETTVAPDTTVAPETTVVPETTMPPPKTDVSVTEATKAPVDQLKTKQPTIATAKTTAD 2005
Query: 318 PVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*I---LSINSSLTLVNSDTL 488
P + V P T++ PET+PA + S P S ++ + +++ T+ T+
Sbjct: 2006 PEITVAPETTVV-------PETTPALETTSAPESTAATESTVAPETTVSQETTVAPETTV 2058
Query: 489 SDQPWVVPEVEESM--TSKP 542
+ VVPE ++ TS P
Sbjct: 2059 PTETTVVPETTPALETTSAP 2078
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +3
Query: 144 LVP*SHVHGTTSMTP-TKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSP 320
+VP + T+M P T A+P +T PA T + P + + V+
Sbjct: 37 MVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL---ETTMVPETTAALETTVAS 93
Query: 321 VMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQP 500
P T+L T+T + PET+ A + +P++ +T + T+ T + +
Sbjct: 94 ETTDAPATTLA-TETTAAPETTVAPETTDLPATTLAPET---TAAQETTVAPETTAAPET 149
Query: 501 WVVPE 515
V PE
Sbjct: 150 TVAPE 154
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +3
Query: 144 LVP*SHVHGTTSMTP-TKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSP 320
+VP + T+M P T A+P +T PA T + P + + V+
Sbjct: 1112 MVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL---ETTMVPETTAALETTVAS 1168
Query: 321 VMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQP 500
P T+L T+T + PET+ A + +P++ +T + T+ T + +
Sbjct: 1169 ETTDAPATTLA-TETTAAPETTVAPETTDLPATTLAPET---TAAQETTVAPETTAAPET 1224
Query: 501 WVVPE 515
V PE
Sbjct: 1225 TVAPE 1229
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 31.1 bits (67), Expect = 0.90
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Frame = +3
Query: 171 TTSMTPTKASPSST-FKRS*RTW------PARATMQVKHQRWPKPPELSPIYLPVSP--- 320
TTS TP K SPS+ K S T P+ +T +K P + SP P+ P
Sbjct: 1270 TTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPS 1329
Query: 321 VMPVQPLTSLT-LTQTASGPETSP 389
P++P S T T P T+P
Sbjct: 1330 TTPIKPSPSTTSTTPIKPSPSTTP 1353
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = +3
Query: 171 TTSMTPTKASP---SSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPL 341
TT + + +SP ++TF S P+ +T+ +S + L + + P
Sbjct: 449 TTGVYTSLSSPGLKNTTFTPSEIVSPSISTLHTSTVELSSTGNVSMLTLKTNSIPVTSPA 508
Query: 342 TSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLS 491
S +L +++ P P S PS+ + + ++ SS+ VNS T+S
Sbjct: 509 PSTSLPASSTLP-VLPTSSLAETPSTQSVASSGVMVTFSSVATVNSSTIS 557
>SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5)
Length = 318
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQTA--SGPETSPASDNLSVPSSDTWDKT 437
SP+ Q +S LTQT S + DNLS P + TWD +
Sbjct: 178 SPLTQTQDNSSSPLTQTQDISSSPLNQTWDNLSCPLTQTWDNS 220
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQT---ASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDT 485
SP+ +S LTQT +S P T DNLS P + TWD + S + T NS +
Sbjct: 35 SPLTQTWDNSSSPLTQTWDNSSSPLTQ-TWDNLSSPLTQTWDNS---SSPLTQTWDNSSS 90
Query: 486 LSDQPW 503
Q W
Sbjct: 91 PLTQTW 96
>SB_36300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +2
Query: 83 SVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQE-ILKDMASQGDYAS 259
+VT +SD + + D KA+++ S YV++ + N+QE IL D ++G+ S
Sbjct: 15 AVTSVDFSDPQGGKGACDRKAATIKSHIRQYVNEGHDVVTAANLQEAILADGGARGEGIS 74
Query: 260 QASAVAQTAGIIAHLSA-------GIPGDACAAANVINSYTDGVRSGNF 385
+ + T + A IP + I + DG G+F
Sbjct: 75 EFNKFTYTDTDVTVWKAYGIGEGKSIPLASLQVPTTIPQFKDGFSDGDF 123
>SB_28079| Best HMM Match : MCPsignal (HMM E-Value=0.00064)
Length = 257
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = -3
Query: 535 EVIDSSTSGT--TQGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAV 362
E+ID + T T +D E+T+ DE+ID ++ +++ T+R E + + D +
Sbjct: 64 EIIDRTDKITDNTGELTDSTGEITKTKDEIIDSTDEITDRTDKITDRTGEITDRT--DKI 121
Query: 361 CVRVNDVSGCT-GITGDTG 308
R ++ T IT TG
Sbjct: 122 TDRTGKITDSTVEITDSTG 140
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -3
Query: 535 EVIDSSTSGT--TQGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAV 362
E+IDS+ T T +DR E+T +D++ D+ ++ + E T+ E +G +
Sbjct: 92 EIIDSTDEITDRTDKITDRTGEITDRTDKITDRTGKITDSTVEITDSTGEITNSTG--EI 149
Query: 361 CVRVNDVSGCTGITGDTGR*MGDNSG 284
+++ TG D+ + D++G
Sbjct: 150 TDSTGEITDSTGEINDSTAELTDSTG 175
>SB_26882| Best HMM Match : MCPsignal (HMM E-Value=0.00063)
Length = 217
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = -3
Query: 535 EVIDSSTSGT--TQGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAV 362
E+ID + T T +D E+T+ DE+ID ++ +++ T+R E + + D +
Sbjct: 45 EIIDRTDKITDNTGELTDSTGEITKTKDEIIDSTDEITDRTDKITDRTGEITDRT--DKI 102
Query: 361 CVRVNDVSGCT-GITGDTG 308
R ++ T IT TG
Sbjct: 103 TDRTGKITDSTVEITDSTG 121
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -3
Query: 535 EVIDSSTSGT--TQGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAV 362
E+IDS+ T T +DR E+T +D++ D+ ++ + E T+ E +G +
Sbjct: 73 EIIDSTDEITDRTDKITDRTGEITDRTDKITDRTGKITDSTVEITDSTGEITNSTG--EI 130
Query: 361 CVRVNDVSGCTGITGDTGR*MGDNSG 284
+++ TG D+ + D++G
Sbjct: 131 TDSTGEITDSTGEITDSTAELTDSTG 156
>SB_15509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 369 SGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPEVEESMTSKPLG 548
SGP TS SD S T D T + ++ + LSD PW+ E ++ P G
Sbjct: 137 SGPGTSNESDTRD---SATDDVTLEVGVDDGSYVDEKGALSDSPWIESESDDDDAHTPSG 193
Query: 549 M 551
+
Sbjct: 194 L 194
>SB_54212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 410 PFFGHVGQNLNLINQLVTNPGQLRYSVG-PALGCAGGGRIY 529
PFF HVG N ++ L+ +P + + G +LG G Y
Sbjct: 37 PFFNHVGSNQLVVTSLIVDPAEEEHKGGSTSLGRKGTLHFY 77
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 312 VSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSD 482
+S + QP T+ T T + +SP+S + +P + T KT ++ + +T SD
Sbjct: 1826 ISSMASAQPTTAETTASTPTSITSSPSSPSTILPETRTIPKTNVVEGGAKITPKPSD 1882
Score = 29.1 bits (62), Expect = 3.6
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
+TS+ T A P +T T P T K + P S P P T+
Sbjct: 3011 STSVPETTALPKTTAVPE-TTTPPETT--AKPETTGAPETTSAPKTTAVPEATAAPETT- 3066
Query: 351 TLTQTASGPETSPASDNLSVPSSDTWDKT*IL--SINSSLTLVNSDTL-SDQPWVVPE-V 518
+ +T + PET+ A + SVP + + +T L + S T DT + + VPE +
Sbjct: 3067 SAPETTAAPETTSAPETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETI 3126
Query: 519 EESMTSKPLGMQS*PAVTLVS 581
T+ G + P T VS
Sbjct: 3127 AAPETTTVPGTTAVPGTTAVS 3147
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSIN 455
P P L + L SP P +PL + + + SP+ + + +S ++ + I
Sbjct: 226 PIPTSLFLVSLQASPSYPYKPLPRIPTSLFLVSLQASPSPSLVHLQASSSYPYKPLPRIT 285
Query: 456 SSLTLVNSDTLSDQPW-VVPEVEESMT 533
+SL LV+ P+ +P + S++
Sbjct: 286 TSLFLVSLQASPSYPYNPLPRIPTSLS 312
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +2
Query: 272 VAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPF 415
VAQ AG IA LSA G+A +IN + V S N Q +G F
Sbjct: 364 VAQLAGSIAELSAYHHGEASLMGTIINLAENFVGSNNI-NLLQPVGQF 410
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 56 VATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEI 223
V++ AY A VTI +YSD I++ + S W+ DD ++ LN+ ++
Sbjct: 2786 VSSKAYGA-RVTIGKYSDRAGKAAIENVEFSLCGQEGWNDWDDPRYALTYLNLDDV 2840
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 4.8
Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*----RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQP 338
TT+ T +P TF T PA T ++P VS V P
Sbjct: 300 TTAAPETTVAPEITFAPETTVVPETTPALETTSAPESTAATESTVAP-ETTVSQETTVAP 358
Query: 339 LTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*I---LSINSSLTLVNSDTLSDQPWVV 509
T++ T+T PET+PA + S P S ++ + ++ + +T T + +
Sbjct: 359 ETTVP-TETTVVPETTPALETTSAPESTAATESTVAPETTVPTEITAAPETTGAPDTTLA 417
Query: 510 PEVEESMTSKPLGMQS*PAVTLVS 581
PE ++ S + P T V+
Sbjct: 418 PETTVALESTMTPESTVPPETTVA 441
>SB_16308| Best HMM Match : MSSP (HMM E-Value=5)
Length = 187
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 302 LSAGIPGDACAA-ANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVTNPGQL 478
+S+G+ G+ C + N+ S G G S+G +G +G LI + G +
Sbjct: 63 MSSGLGGNTCRSIGNMCVSL--GKMPGLIGSIPGSIGNMYGTIGNMYGLIGNMYGTIGNM 120
Query: 479 RYSVGPALGCAG 514
S+G G G
Sbjct: 121 YGSIGNMYGLIG 132
>SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06)
Length = 241
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 484 VSELTRVSDELIDKIQVLSHVSEEGTERLSEAGE 383
++ L +S L DK++ H++E GTER ++ E
Sbjct: 61 INRLENLSVNLQDKVKNYEHLNETGTERTNQLQE 94
>SB_12293| Best HMM Match : OATP (HMM E-Value=0)
Length = 1446
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 487 RVSELTRVSDELIDKIQVLSHVSEE 413
+ E+TR+ D++ KIQVL SEE
Sbjct: 1194 KTGEVTRMLDDIAQKIQVLKRKSEE 1218
>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
Length = 932
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Frame = +3
Query: 180 MTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVS-PVMPVQPLTS-LT 353
+TPT PSS K++ R + +TM + S +P S + TS T
Sbjct: 510 VTPTVTIPSSADKQASRAATSNSTMPSSADKQASRAATSNSTIPRSTDAQASRAATSNST 569
Query: 354 LTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSL---TLVNSDTLSDQPWVVPEVEE 524
+ ++ + PA+ N ++P S + + NS++ T + + +P +
Sbjct: 570 IPRSTDAQASRPATSNATIPRSTDAQASRAATSNSTIPRSTDAQASRAATSNSTIPRSTD 629
Query: 525 SMTSKP 542
+ S+P
Sbjct: 630 AQASRP 635
>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 897
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 266 MLDLHSRPGWPCPSRSLER*GWRCFCRCHRRSPMH 162
MLDL G SR +E G C CH +P H
Sbjct: 472 MLDLSQALGDVVKSRQVEECGESRDCECHHNAPCH 506
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 6.3
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +3
Query: 144 LVP*SHVHGTTSMTP-TKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSP 320
+VP + T+M P T A+P +T PA T + P + + V+
Sbjct: 2364 MVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL---ETTMVPETTAALETTVAS 2420
Query: 321 VMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQP 500
P T+L T+T + PET+ A + +P++ +T + T+ T + +
Sbjct: 2421 ETTDAPATTLA-TETTAAPETTVAPETTDLPATTLAPET---TAAQETTVAPETTAAPET 2476
Query: 501 WVVPE 515
V PE
Sbjct: 2477 TVAPE 2481
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 312 VSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLS 491
V+P V P S T+T PET+ A + + P + K+ ++ T+ T++
Sbjct: 2770 VAPESTVPP-ESTVATETTVAPETTAAPEITAAPDTTMVPKS---TVAPDTTVAPESTVA 2825
Query: 492 DQPWVVPE 515
+ VVPE
Sbjct: 2826 PETTVVPE 2833
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSP--IYLPVSPVMPVQPLT 344
TT+ T +P +T T A AT + ++P +P + V P ++
Sbjct: 3050 TTAAPKTTVAPETTVAPE--TTDAPATTMAPETKAVSETTMAPEATVVPKTTVGPSTTIS 3107
Query: 345 SLTLTQTASGPETSPASDNLS 407
T T PETSPA+ ++S
Sbjct: 3108 PKTETSITETPETSPATISIS 3128
>SB_58977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = -3
Query: 478 ELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
E+ +++ + I+ ++ + E ++L + + S P+A+CVR+ SG
Sbjct: 85 EVIKMATNNLFIIKSIARLRVEKQDQLPDEPDASNPEALCVRIKLASG 132
>SB_47814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1492
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 451 STRH*PWSTPILCRTSP 501
+ +H PW+TP++ RT P
Sbjct: 536 TVKHGPWNTPVVARTKP 552
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPL-TS 347
T TPT P+ T + P T Q P P +P SP P Q T
Sbjct: 19 TPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTP--TTP-----SPTAPTQTTPTP 71
Query: 348 LTLTQTASGPET-SPASDNLSVPSSDT 425
T T T P+T +P + L+ P+ T
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPAT 98
>SB_18064| Best HMM Match : CBM_6 (HMM E-Value=3)
Length = 333
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 131 DDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD-YASQASAVAQTAGIIAHLS 307
DDG A +V+ A D DD +A + + L +AS D A +A A +A ++
Sbjct: 23 DDGDALAVVVSADDADDDVTLVVASSDDGDALAVVASADDGDALAVAASADDGDALAVVA 82
Query: 308 AGIPGDACAAANVIN 352
+ GDA A N
Sbjct: 83 SADDGDALVVALAYN 97
>SB_59101| Best HMM Match : PT (HMM E-Value=0.026)
Length = 386
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 488 VGPALGCAGGGRIYDFEAAWDAILASSDS 574
V A G AGGG ++W + ASSD+
Sbjct: 115 VSHAFGVAGGGLRLSHNSSWPCVTASSDT 143
>SB_56403| Best HMM Match : fn3 (HMM E-Value=1.5e-29)
Length = 236
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 451 STRH*PWSTPILCRTSP 501
+ +H PW+TP++ RT P
Sbjct: 218 TVKHGPWNTPVVARTKP 234
>SB_18557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 348 LTLTQTASGPETSPASDNLSVPSSDTWDKT 437
LT T+ S P + DNLS P + TWD +
Sbjct: 67 LTRTRDNSIPPLTQTWDNLSSPLTQTWDNS 96
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 185 CHR-RSPMHVRLRN*LFHHQCRVEFHYH 105
CHR R H+RL L +H+ R+ H+H
Sbjct: 440 CHRPRLSNHLRLSRHLHYHRRRLSIHHH 467
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 267 QRWPKPPELSPIYLPVSPVMPVQPLTSL 350
Q+ P+PP+ + I P P M QP++SL
Sbjct: 974 QQTPQPPQPAQIMRPAHPQMISQPVSSL 1001
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,319,085
Number of Sequences: 59808
Number of extensions: 443676
Number of successful extensions: 1720
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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