Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G23
(596 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 36 0.019
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 35 0.043
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 34 0.10
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 31 0.93
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 30 1.2
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 30 1.6
SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011) 30 1.6
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 29 2.9
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 29 2.9
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 29 2.9
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_19246| Best HMM Match : CPL (HMM E-Value=5.99994e-41) 29 2.9
SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5) 29 3.8
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 28 5.0
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 28 5.0
SB_56042| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7) 28 6.6
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 28 6.6
SB_16223| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 28 6.6
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 27 8.7
SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQ-ESQKLXKXVSSN 488
KAKEAL + + ++ T E+L+ AH + + L+ K +N ES + +
Sbjct: 1829 KAKEALSKENKELKGTVEQLQDAHEKLSEENRLLKRKENEQSENVDDFESGEELQLKIKE 1888
Query: 489 VQETNEKLAPKIKAA 533
+ E NE L+ +++ A
Sbjct: 1889 LNEKNESLSSQLREA 1903
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = +3
Query: 318 KEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQE 497
+E+L+ SR + ER ++ + + T ++E LQA + V QKL + + N +
Sbjct: 367 EESLKASRSDNERLQTQINSIQAESETSKTEVKEVLQALEELAVNYDQKLQEVDAKN--K 424
Query: 498 TNEKLAPKIKAAYDDFAKNTQ 560
N+KL +I + +K T+
Sbjct: 425 ENDKLNDEITTKQVELSKTTK 445
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +3
Query: 24 SLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQR 203
S S +H + RS R P+ + RRSR Q R+P + S R + S S R
Sbjct: 218 SRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPRS-SKRYRSSRSHR 276
Query: 204 THRTSAR 224
HR+ +R
Sbjct: 277 KHRSHSR 283
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNV 491
KAKE ++Q E ++ + K+ LREK+Q+ + ++ S+KL + + +
Sbjct: 1614 KAKEKIKQGSARQEEQTKKYKAYQEKREKDVAELREKVQSLEKELMETSEKLREDLRGS- 1672
Query: 492 QETNEKLAPKIKA 530
++ E+L K++A
Sbjct: 1673 EKREEELKLKLEA 1685
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 318 KEALEQSRQNIERTAEELRKAHPDVXKNATA-LREKLQAAVQNTVQESQKLXKXVSSNVQ 494
K +Q Q E+ EEL+K H D A A K++ ++ ++ + L K +
Sbjct: 1999 KRITDQKVQESEQMVEELKKQHEDALLAAEADYHSKMEEMLKKNEEDMENLNKEHKLKLD 2058
Query: 495 ETNE 506
E E
Sbjct: 2059 ELQE 2062
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVX---KNATALREKLQAAVQNTVQESQKLX 470
DA AK E +Q IER E+LRKA + ++ AL+ K+ A Q + L
Sbjct: 1025 DALAAAKAREENLKQQIERLNEDLRKAKEEFTPEMRHFDALQSKIAAMELRFTQREEDLN 1084
Query: 471 KXVSS 485
+ +++
Sbjct: 1085 RIINT 1089
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 31.1 bits (67), Expect = 0.71
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNT-VQESQKLXKXVS-- 482
+ ++ L++S Q ++ E L K+ + N + R+ L+ VQ+T +S KL +
Sbjct: 3488 RTQDLLDKSEQELKAAEENLVKSFQE---NESLKRQMLK--VQSTSCADSVKLQADIGKL 3542
Query: 483 -SNVQETNEKLAPKIKAAYDDFAKN 554
+ +Q T + L+ KIK D FAKN
Sbjct: 3543 KTELQSTKKDLSDKIKEYNDLFAKN 3567
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 30.7 bits (66), Expect = 0.93
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 312 KAKEALEQSRQN-IERTAEE---LRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXV 479
+A++ALE++ IE EE LR DV + A EKL Q TVQ+ + + +
Sbjct: 704 QARQALEETMHTTIEELHEEVETLRSRLQDVGQ-AKLEAEKLVQDTQATVQQQSEEVRSL 762
Query: 480 SSNVQETNEKLA 515
SS++ N +LA
Sbjct: 763 SSDIDRLNLQLA 774
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 294 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXK 473
L +A+ + +++ Q + + + K PD+ N L+ AVQ + SQ+L +
Sbjct: 298 LREAHANLESVIQKQTQR-KSEIKSIEKELPDLKNNLKKAEADLEKAVQGEAKSSQEL-R 355
Query: 474 XVSSNVQETNEKL 512
+ S V+E L
Sbjct: 356 SIRSKVEEARSSL 368
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 327 LEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETNE 506
L++ IE+ ++L A KN L E +A+QNT+Q + + E
Sbjct: 253 LQEYTDEIEKLKKDLFAARE---KNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEA 309
Query: 507 KLAPKIKAAYDDFAKNTQ 560
A KI+A + K T+
Sbjct: 310 DFAAKIEAMEAELQKVTE 327
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Frame = +3
Query: 324 ALEQSRQNIERTAEELR-KAHPDVXKNATA------LREKLQAAVQNTVQESQKLXKXVS 482
A+ ++ QNIER EEL K +++T + +KLQ A ++ VQE + +
Sbjct: 280 AVNETAQNIEREREELELKLRGSEEEDSTVQGMIKIIEDKLQ-ATESMVQEQSGERERLE 338
Query: 483 SNVQETNEKLAPKIKAAYDDFAKNTQE 563
++ E E+L+ K KA + KN++E
Sbjct: 339 GHLAEITEELS-KEKAGNKEL-KNSEE 363
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 288 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQN 443
A + + K K ++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 342 AEITEELSKEKAGNKELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011)
Length = 270
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNT---VQESQKLX 470
+A G EAL + + T E LR H + ALR+ + A++NT ++++ +
Sbjct: 8 EALGDTHEALRDTHDALRDTHEALRDTHEALRDTHEALRD-IHEALRNTHEPLRDTHEAL 66
Query: 471 KXVSSNVQETNEKLAPKIKAAYD 539
+ +++T+E L +A D
Sbjct: 67 RYTHEALRDTHEALRDTHEALRD 89
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 321 EALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAA--VQNTVQESQKLXKXVSSNVQ 494
EAL + + + T E LR H + ALR+ +A + ++++ + + ++
Sbjct: 148 EALRDTHEALRDTHEALRDTHEALRDTHEALRDIHEALRDIHEALRDTHEALRDTHEALR 207
Query: 495 ETNEKLAPKIKAAYD 539
+T+E L KA D
Sbjct: 208 DTHEALGDTHKALRD 222
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = +3
Query: 330 EQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETNEK 509
+++ +E + +R+ H + + L K+QA +T E + L + V +
Sbjct: 1395 DETISQLENDLKSVRQLHNETVEEKGKLEAKIQAYKISTQSEHEVLAEEVYTRYSSRTRA 1454
Query: 510 LAPKIKAAYDDFAKNTQ 560
+I+ Y+D ++ Q
Sbjct: 1455 SIERIRQQYEDCLQDVQ 1471
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 318 KEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQA----AVQNTVQESQKLXKXVSS 485
+E ++ +Q IE EL A+ ++ KN + + V+ ++ ++ +++
Sbjct: 24 REKNQEQQQRIEELTCELELAYQEI-KNTEERKNYENSEHVLVVKADLERARDNYVKLAN 82
Query: 486 NVQETNEKLAPKIKAAYDDFAKNTQEGD 569
+ +E N +L I+A DD+ N +GD
Sbjct: 83 DREEENNRLNETIRALQDDYCYNYGDGD 110
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/49 (22%), Positives = 23/49 (46%)
Frame = +3
Query: 351 ERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQE 497
+RT EE+R+ D+ + +RE + + +N Q+ ++E
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQMDSTRDATRKQIEE 220
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/74 (21%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 LEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNT---VQESQKLXKXVSSNVQE 497
+ ++++ ++ T +++++ +V + T + E + VQ T VQE++K + + V E
Sbjct: 199 VNETKKEVQETKKDVQETKKEVHETKTKVDET-KREVQETKKDVQETKKEVQETKTKVDE 257
Query: 498 TNEKLAPKIKAAYD 539
TN+++ K ++
Sbjct: 258 TNKEVQETKKEVHE 271
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 306 NGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQ----ESQKLXK 473
N K +EAL+++ E+ AE + + ++ + + L +++ ++N ++ E QKL +
Sbjct: 154 NAKLEEALKRA---CEKHAEHMEQLDDELDQQMSRLEMRIKKELENKIKKKEPEEQKLKE 210
Query: 474 XVSSNVQE 497
+ VQE
Sbjct: 211 EIEEKVQE 218
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 324 ALEQSRQNIERTAEELRKAHPDVXKNATALREKLQA---AVQNTVQESQKLXKXVSSNV- 491
A+++ + + + + E+R+A D + TAL+ K+ + VQ +E ++ K V
Sbjct: 571 AVQKFQDFLTKVSAEIRRARNDSEQLETALKSKMNSHDTEVQKLYEEMEQQIKVVRDTYQ 630
Query: 492 QETNEKLAPKIKAAYDDFAKN 554
QE +++A K K + +N
Sbjct: 631 QELEDEIAMKEKGEQEIKTEN 651
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 402 ATALREKLQAAVQNTVQESQKLXKXVSSNVQETNEKLAPKIKAAYDDFAKNTQE 563
A +++ QA + T E+QKL + +++ QETNE + K + +KNTQ+
Sbjct: 72 AEKIKQLEQALKEKTHNETQKLDRILATCHQETNEVINSK---SISHESKNTQK 122
>SB_19246| Best HMM Match : CPL (HMM E-Value=5.99994e-41)
Length = 506
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = +3
Query: 291 ALGDANGKAKEALEQSRQNI----ERTAEELRKAHPDVXKNATALREKLQAAVQNTVQES 458
A + + K E + +Q+I ++ +E RK H + +L++ + +N V +S
Sbjct: 80 ASSNKDTKPSEGDTEDKQDIWKMKKKERKEYRKKHDESYDLIHSLKQHYETLRRNDVAKS 139
Query: 459 QKLXKXVSSNVQ----ETNEKLAPKIKAAYDDFAKNTQE 563
QK+ K +S ++ T+E+ + ++A Y D+A Q+
Sbjct: 140 QKV-KLISDILKLIAGHTHEEASEIMEAIYTDYAVAAQK 177
>SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5)
Length = 592
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +3
Query: 81 SGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSARLGRTAXXXX-XX 257
S R G + + +P +G+ + + + S +T TS R+ +T
Sbjct: 318 SSARPSGTSTPTNRQNAADSPSRGTGSS--STKSSGNSSSKTQSTSNRVVKTTGSTTPIA 375
Query: 258 XXXXXXRVSXAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAV 437
S G++ GK K ++ +++ E+ E +K D+ KN++ +EK +
Sbjct: 376 KADTTGSESEGKRGESVGKTKSK-DKDKESREKDKE--KKEERDLDKNSSERKEKHERDK 432
Query: 438 QNTVQESQKLXKXVSSNVQETNEK 509
+ +E + S ++T EK
Sbjct: 433 EAKTKERSISKERDKSKGEKTKEK 456
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +3
Query: 327 LEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNT---VQESQKLXKXVSSNVQE 497
+ ++++ ++ T +++++ +V + T + E + VQ T VQE++K + + V E
Sbjct: 1293 VNETKKEVQETKKDVQETKKEVDETKTKVDET-KKEVQETKKDVQETKKEVQETKTKVDE 1351
Query: 498 TNEKL 512
TN+++
Sbjct: 1352 TNKEV 1356
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = +3
Query: 321 EALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQET 500
++L +S QN++ EE+ +A + +++KL A + + ++ K K + N E
Sbjct: 239 DSLVKSMQNVKAITEEIERAKVAADHLISEVKDKLDIA-KEQLDDNAKYIKCL-ENPDEA 296
Query: 501 NEKLAPKIKAAYDDFAKNTQEGDQ*RFREGG 593
++ + KI+ A+N E + + R+ G
Sbjct: 297 DKYVKQKIQQRVKRTAENLVESHRMKKRKLG 327
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = +3
Query: 321 EALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQET 500
++L +S QN++ EE+ +A + +++KL A + + ++ K K + N E
Sbjct: 215 DSLVKSMQNVKAITEEIERAKVAADHLISEVKDKLDIA-KEQLDDNAKYIKCL-ENPDEA 272
Query: 501 NEKLAPKIKAAYDDFAKNTQEGDQ*RFREGG 593
++ + KI+ A+N E + + R+ G
Sbjct: 273 DKYVKQKIQQRVKRTAENLVESHRMKKRKLG 303
>SB_56042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +3
Query: 303 ANGKAKEALEQSRQNIERTAEELR-KAHPDVXKNATALREKLQAAVQNTVQ--ESQKLXK 473
A G K+A ++ ++ EE R K + + KL+A + VQ K+ +
Sbjct: 83 APGIEKKATKKPKEGKRNKEEEKRIKLLMRAFEGLDSTEAKLEALAKKYVQLASEHKVVE 142
Query: 474 XVSSNVQETNEKLAPKIKAAYDDFAKNT 557
++ NEKL + A DF K T
Sbjct: 143 HRKDELEARNEKLTKERDALQSDFNKTT 170
>SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7)
Length = 272
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = -3
Query: 168 KVLWNCLGVVFDVLEEVGSVASHHRSLGQSDAGEENYELGGHDVLSRD 25
K++ + + +FD +E+ + ++ + ++ + E E+GG + L RD
Sbjct: 115 KIIADQVRTIFDETKEINASSNKPTATTENTSNESEQEVGGSNALPRD 162
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 294 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQ---AAVQNTVQESQK 464
L + N E + S + + E+ R PD K T +++ Q A++++ Q S+
Sbjct: 1245 LAEKNAMKSEIMRWSTKT-NQLMEQYRNVDPDEYKRMTEEKKQFQQHVASLKSESQRSKT 1303
Query: 465 LXKXVSSNVQETNEKLAPKIKAAYDDFAKNTQEGDQ 572
L + V + + +T +L K++A + KN Q+ Q
Sbjct: 1304 LLENVRNELTKTKAELT-KVQAELLN-VKNDQQKAQ 1337
>SB_16223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +3
Query: 294 LGDANGKAKEALEQSRQNIERTAEEL-----RKAHPDVXKNATALREKLQAAVQNTVQES 458
+GD GK+ + E+ ++R AEE R+A ++ K A EK AV +
Sbjct: 377 VGDLVGKSMKQTEERVNEVKRRAEEAVSEVKRQAVVELQKAVRAAEEKANEAVAGAHAKM 436
Query: 459 QK-LXKXVSSNVQETN 503
+K + + ++ETN
Sbjct: 437 EKAVLEARRQAIEETN 452
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 411 LREKLQAAVQNTVQESQKLXKXVSSNVQETNEKLAPKIKAAYDDFAKNTQ 560
L+E+ ++ + +Q+ +K K S Q+T APK K A TQ
Sbjct: 340 LKEEYKSLQRQAMQDLKKQLKQTSEAQQQTETNSAPKAKPAKPSVPSPTQ 389
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 276 RVSXAALGDANGKAK-EALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQ 452
+V+ A+ KA+ E + +QN+E+ + L + + +A +EKLQAA N +Q
Sbjct: 500 KVTEASQDRGRFKAQAEVVATEKQNLEKMRQSLNEQ----VEGLSAEKEKLQAA-NNELQ 554
Query: 453 ESQKLXKXVSSNVQETNEKLAPKI 524
+ + ++Q E++A +I
Sbjct: 555 RQRDNLEDDKEDLQREVERMAKEI 578
>SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 167 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL-NAFAKSLQXSA 295
L Q LTK +D+S+AW G E +LQ++ + A SL A
Sbjct: 304 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKMTQSSANSLISEA 346
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,036,463
Number of Sequences: 59808
Number of extensions: 218374
Number of successful extensions: 857
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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