Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G14
         (638 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11311| Best HMM Match : M-inducer_phosp (HMM E-Value=8.4)           44   1e-04
SB_57551| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_36782| Best HMM Match : Pkinase (HMM E-Value=1.4e-32)               28   5.6  
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92)                  28   7.4  
SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012)         27   9.7  

>SB_11311| Best HMM Match : M-inducer_phosp (HMM E-Value=8.4)
          Length = 279

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +3

Query: 60  RRPFSRDVDLQVNRFDEAQKRSIIKKAQDLNNRF--SKGEAKYL 185
           RRPF RDVDL       AQ++S+IKK+Q+L +RF  +K  + YL
Sbjct: 236 RRPFDRDVDLSSPGMSAAQRKSLIKKSQELGSRFHHAKKGSSYL 279


>SB_57551| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 125

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 530 KYLIV*RLRCIYYCILFCARRYFETVTKRSQIFIL 426
           KY+ +  LRC++Y   +  RRY + + K   +++L
Sbjct: 50  KYIFIVLLRCVFYSFTY-IRRYSQVLLKTDSLWLL 83


>SB_36782| Best HMM Match : Pkinase (HMM E-Value=1.4e-32)
          Length = 310

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -2

Query: 211 GRLKTFDRYKYLA-SPF-ENLLFKS*AFLMIERFCASSN 101
           G +K +D YK    +PF + +L K   + +IERFCA  N
Sbjct: 253 GEVKNYDVYKVRGGTPFLQCMLVKIRQYELIERFCALQN 291


>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 287

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -3

Query: 555 YPNYISLHEIFDCVKTSLYILLHIILRA*IFRDGDQTFTNIYSTTQYLVVKRL 397
           Y NYI L ++    +T+LY   +I+LR    +    T T +Y    Y+++++L
Sbjct: 103 YENYILLRKLHSTAQTTLYFANYILLR----KLHSTTQTTLY-YANYIILRKL 150


>SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1867

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 400  LKTLNRQKKSFYYLVLSLKKNNSM 329
            ++TLN+++K F+Y VL L K + M
Sbjct: 1268 VQTLNKEQKEFFYHVLHLIKTSDM 1291


>SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92)
          Length = 1100

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 400 LKTLNRQKKSFYYLVLSLKKNNSM 329
           ++TLN+++K F+Y VL L K + M
Sbjct: 928 VQTLNKEQKEFFYHVLHLIKTSDM 951


>SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012)
          Length = 966

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 400 LKTLNRQKKSFYYLVLSLKKNNSM 329
           ++TLN+++K F+Y VL L K + M
Sbjct: 403 VQTLNKKQKEFFYHVLHLIKTSDM 426


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,040
Number of Sequences: 59808
Number of extensions: 257200
Number of successful extensions: 586
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)