Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C13
(808 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28) 155 5e-38
SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24) 109 3e-24
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43) 97 1e-20
SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 42 8e-04
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 36 0.039
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 32 0.63
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 1.1
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 30 2.5
SB_57766| Best HMM Match : MFS_1 (HMM E-Value=2.4e-14) 30 2.5
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 30 2.5
SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_22495| Best HMM Match : DUF116 (HMM E-Value=8.1) 29 5.9
SB_47670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_38184| Best HMM Match : HisKA_2 (HMM E-Value=8.6) 29 5.9
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 29 5.9
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 28 7.7
SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_46871| Best HMM Match : PAN (HMM E-Value=1) 28 7.7
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 7.7
SB_27445| Best HMM Match : DUF227 (HMM E-Value=9.9) 28 7.7
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 28 7.7
SB_15433| Best HMM Match : Arm (HMM E-Value=9.7) 28 7.7
>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
Length = 234
Score = 155 bits (375), Expect = 5e-38
Identities = 85/151 (56%), Positives = 103/151 (68%)
Frame = +1
Query: 355 KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLS 534
KRE+ +QKRRNVP+ +E D+ DL+ +VM A + ++P QL AVQ RKLLS
Sbjct: 2 KREDCMQKRRNVPLELP---DEKDEKFQRRDLNAIVMEAGS-DDPSVQLGAVQAARKLLS 57
Query: 535 CDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 714
DKNPPID+LI N +LQFE AWALTNIASGTS QT VV+AGAVP
Sbjct: 58 KDKNPPIDDLI----------------NHSLQFEAAWALTNIASGTSEQTQAVVNAGAVP 101
Query: 715 VFLQLLMSPHENVCDQAVWALGNIIGDGPXL 807
FL+LL SP ++VC+QAVWALGNI+GDGP L
Sbjct: 102 FFLKLLNSPRQHVCEQAVWALGNIVGDGPVL 132
>SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)
Length = 163
Score = 109 bits (261), Expect = 3e-24
Identities = 57/101 (56%), Positives = 69/101 (68%)
Frame = +1
Query: 505 AVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQT 684
+VQ RK+LS +K+PPID++I NP LQFE AWALTNIASGTS QT
Sbjct: 13 SVQSVRKMLSKEKSPPIDDVI----------------NPLLQFEAAWALTNIASGTSEQT 56
Query: 685 NKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPXL 807
V GAVP+F++LL S H+NV +QAVWALGNI GDGP +
Sbjct: 57 KAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGDGPLM 97
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 574 GILPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM-SPHE 747
G +P+ V+ LS DN A Q WAL NIA N V+ GA+ L L+ S
Sbjct: 63 GAVPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGALGPLLALIKPSTSI 120
Query: 748 NVCDQAVWALGNI 786
W L N+
Sbjct: 121 QFLRNVTWTLSNL 133
>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 100 bits (239), Expect = 2e-21
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 6/127 (4%)
Frame = +1
Query: 268 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 447
R+ +KN DV EMRRRR E V+LRK KREE + KRRNV ++ ++ + L T+D
Sbjct: 689 RIKAYKNKSLDVSEMRRRREEEGVQLRKAKREEQMFKRRNVEVTRTSSTGSELEELLTSD 748
Query: 448 ------LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSR 609
L + ++ A +++ E QLAA Q+ RK+LS + NPPID++I G++P V+ L R
Sbjct: 749 YMAEGPLFQDMVQAIISDDVEMQLAATQRFRKILSKEPNPPIDDVIKCGVIPKFVEFLQR 808
Query: 610 ADNPALQ 630
DN ALQ
Sbjct: 809 EDNSALQ 815
>SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)
Length = 215
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +1
Query: 616 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 795
+P LQFE AWALTNIASGTS QT V GAVP+F++LL S H+NV +QAVWALGNI GD
Sbjct: 18 HPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGD 77
Query: 796 GPXL 807
GP +
Sbjct: 78 GPLM 81
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +1
Query: 538 DKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 717
+KNPP D +LP + + + D L +T WAL+ + G + + V+ +G VP
Sbjct: 120 NKNPPPDVTAVQQVLPAIARLILSDDKEVLA-DTCWALSYLTDGVNERIQLVLDSGVVPK 178
Query: 718 FLQLLMSPHENVCDQAVWALGNI 786
++LL P NV +A WA+ N+
Sbjct: 179 LVELLGYPEVNVL-EAAWAISNV 200
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 574 GILPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM-SPHE 747
G +P+ V+ LS DN A Q WAL NIA N V+ GA+ L L+ S
Sbjct: 47 GAVPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGALGPLLALIKPSTSI 104
Query: 748 NVCDQAVWALGNI 786
W L N+
Sbjct: 105 QFLRNVTWTLSNL 117
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 544 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQ 681
N I ++ +G++P LV+ L + L E AWA++N+ +GT+ Q
Sbjct: 164 NERIQLVLDSGVVPKLVELLGYPEVNVL--EAAWAISNVTAGTAQQ 207
>SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 64.5 bits (150), Expect = 1e-10
Identities = 50/177 (28%), Positives = 81/177 (45%)
Frame = +1
Query: 265 NRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATT 444
NR ++K G V R RR +LRK +RE L +R I ++ +E E +++
Sbjct: 2 NRKDLYKQGGHSVQAQRSRRRGQEADLRKERRERLLSSKR---IRFAEEEAE-EEDFTVE 57
Query: 445 DLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPA 624
+ + A + L ++ RK + + L +V L+ N
Sbjct: 58 QVRDYAK--AIQKYDSNTLHCLRSLRKAFAQGSELISAFMGVENGLRSVVGYLT-GHNID 114
Query: 625 LQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 795
LQ E AW +TN+++GT T +V+ A A P + L + ++ DQ WALGN+ GD
Sbjct: 115 LQLEAAWCITNLSAGTHEDTLRVLKA-AAPYLITYLSGQNLSLQDQCAWALGNMSGD 170
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +1
Query: 613 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 717
D +LQFE AWALTNIASGTS QT VV+AG PV
Sbjct: 760 DGHSLQFEAAWALTNIASGTSEQTQAVVNAGDGPV 794
Score = 43.2 bits (97), Expect = 3e-04
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +1
Query: 547 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQ 726
PPID + +LP L + D L A+ NI +GT QT V++ GA+ F
Sbjct: 839 PPIDTI--REVLPALALLIHHQD---LDTAALRAVGNIVTGTDEQTQVVLNHGALSHFTG 893
Query: 727 LLMSPHENVCDQAVWALGNI 786
LL E + +AVW L NI
Sbjct: 894 LLTHHKEKIKKEAVWFLSNI 913
>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = +1
Query: 577 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 756
+L ++ CL ++ + ++ E+ W L+N+ +G + VVHAG VPV +++L S ++
Sbjct: 20 LLHAVMACL-QSSHRHVRKESLWVLSNLTAGPAESCWAVVHAGLVPVTVKMLASEAFDIK 78
Query: 757 DQAVWALGNIIGDGP 801
+ L NI GP
Sbjct: 79 KEVALTLCNISYHGP 93
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 41.5 bits (93), Expect = 8e-04
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = +1
Query: 562 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 741
++ G L LV CL D P ++ AWAL IA + + VV AGAVP+ + + P
Sbjct: 119 VVDCGALDALVICLEEFD-PGVKEAAAWALGYIARHNAELSQAVVDAGAVPLLVLCIQEP 177
Query: 742 HENVCDQAVWALGNIIGDGPXL 807
+ A AL +I P L
Sbjct: 178 ELALKRIASSALSDICKHSPEL 199
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1
Query: 556 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 735
+ ++ A ILP LV L+ N + A+ L +A ++ VV GA+ + L
Sbjct: 75 EAVVKADILPQLVYSLAE-QNRFYKKAAAFVLRAVAKHSAQHAQCVVDCGALDALVICLE 133
Query: 736 SPHENVCDQAVWALGNI 786
V + A WALG I
Sbjct: 134 EFDPGVKEAAAWALGYI 150
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 574 GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV 693
G +PI+V+CLS N ++F A L N++SGT + NK+
Sbjct: 1216 GGIPIVVRCLSH-QNDQVRFAAACVLRNLSSGTKSDQNKL 1254
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 32.3 bits (70), Expect = 0.48
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +1
Query: 304 DEMRRRRNEVTVEL-RKNKREETLQKRRNVPISYSTDEEEIDK---NLATTDLDELVMNA 471
+++RRRR E L RK K E K R I D E + K + T + E +
Sbjct: 3892 EKLRRRREEKEAALLRKQKEEAAKSKIRLDDIESKADVETLIKRQEGVQDTIIQEEITGT 3951
Query: 472 ANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGIL 582
A +E +A + + R+ + + +D+L+A+G L
Sbjct: 3952 ARSEG-QASNEEIGEYRRRMGDNFCSTVDDLVASGQL 3987
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +1
Query: 250 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDK 429
+DQ ++++VF ++ + V R+ N+ T R K + L N +++ T E I K
Sbjct: 155 SDQESDQLYVFADSKEKVQVSRQHENQATT--RMIKPQWGLTSFDNKTVAFKTLTESIGK 212
Query: 430 NLATTDLDELVMNAANAENPEAQLAAVQ 513
+ + LV + N E A+++
Sbjct: 213 EAEEIEKEVLVQKTVDHANGEVVNASLE 240
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = -3
Query: 563 SSSIGGFLSHESSFLHCCTAANCASGF----SALAAFITSSSRSVVARFLSISSS 411
SSS+ FLS SS T+++ S F S+L+ F+TSS S+++ F+S SSS
Sbjct: 331 SSSLSDFLSLSSSLSDFLTSSSLPSDFLTSSSSLSDFLTSS--SLLSDFISSSSS 383
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 223 ETASTDKMATDQAKNRMHVFKNAGKDVD-----EMRRRRNEVTVELRKNKREETLQKRRN 387
+TAS + ++ GKDVD E+RR+R E + +REE + RR
Sbjct: 437 DTASVATEVPSMRSSDKETVRSDGKDVDDSGSLELRRQREEARRLEEQRRREEEERTRRE 496
Query: 388 VPISYSTDEEE 420
+ +EEE
Sbjct: 497 KEEAQRREEEE 507
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 241 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 420
K TD + R + K+ E++R+R+E+T N R+E ++ + + +T EE
Sbjct: 200 KERTDDLEQRRSSIEQNNKEYSELKRKRDELT-----NTRKELWRQEAAMEQTINTAREE 254
Query: 421 IDKN 432
+ K+
Sbjct: 255 LSKS 258
>SB_57766| Best HMM Match : MFS_1 (HMM E-Value=2.4e-14)
Length = 499
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 587 MGSIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSIS 417
+GS+ A+S +G + + T CAS SA+ F+TS S+ +L+ S
Sbjct: 74 VGSLALALSIGLGPVFAKLINSFGARTVTICASVVSAVGLFVTSQVNSLPLMYLTYS 130
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 409 DEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 567
++EE+ A L+E V+NAA N L+A++ C K + D P +++
Sbjct: 336 EDEELILQFAEYLLEERVLNAATVSN---HLSAIEYCLKYIHKDSAPVFPDVV 385
>SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1743
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 447 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 280
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 1488 IGGTSVSLDHRMIGRITRKFFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 1542
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +1
Query: 256 QAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI--DK 429
Q + ++ N D +E R+ + ++RK K+E+ +KR+ V +++ EEE+ K
Sbjct: 130 QKRKKVQSKTNNKSDNEEEDERQEK---KIRKQKQEK--RKRKTVKADFNSSEEEVSSQK 184
Query: 430 NLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 564
A++ D+ MN A + + + S D+ + EL
Sbjct: 185 TKASSRKDQKKMNKQMANKGKGAKSKKKTIESNSSDDEEGQVAEL 229
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 285 LEHMHAVFRLISR--HFICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGLT 112
LEH F + + + IC R LD R YT N+ L S+L+ + DG L
Sbjct: 566 LEHSDCAFMVDNEAIYDICRRNLDIERPTYT-----NLNRLISQLVSSITASLRFDGALN 620
Query: 111 SIFTKYST 88
T++ T
Sbjct: 621 VDLTEFQT 628
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 205 ITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRR 321
I+ + ET ST + A + NR+++ K A +D +RRR
Sbjct: 346 ISEHYTETVSTVQNAIKECINRLNIRKKANGFLDTLRRR 384
>SB_22495| Best HMM Match : DUF116 (HMM E-Value=8.1)
Length = 440
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 447 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 280
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 341 IGGTSVSLDHRMIGRITRKLFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 395
>SB_47670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 277 VFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 420
V+K A + R+R+E T E++K + +KRR + S +EEE
Sbjct: 123 VYKLAVLSAGKKIRKRHEKTTEMQKQTKMVPRKKRRVLSSSEEEEEEE 170
>SB_38184| Best HMM Match : HisKA_2 (HMM E-Value=8.6)
Length = 528
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 447 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 280
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 394 IGGTSVSLDHRMIGRITRKLFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 448
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 250 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKRE--ETLQKRRNVPISYSTDEEEI 423
T+Q V K D +E++ R +E+ +L KNK + ET ++ + I Y +++ +
Sbjct: 341 TEQIFQEKKVVKKLQVDEEEIKHRISELQNQLAKNKSKLSETQERCEKLEIRYDEEKQRL 400
>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/65 (21%), Positives = 30/65 (46%)
Frame = +1
Query: 274 HVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLD 453
H A + +DE R+R+++ V ++ + EE L+ N ++ + E + + +
Sbjct: 238 HDKSQANRSIDEDRKRKSDELVSVKGDSEEEGLENVENTDVNGNEGPEAKKRKVIYQENS 297
Query: 454 ELVMN 468
L N
Sbjct: 298 GLAQN 302
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/90 (22%), Positives = 39/90 (43%)
Frame = +1
Query: 223 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY 402
E DK DQ ++ + + K++D + + E+ E + +E + + +
Sbjct: 136 EMDKEDKEEMDQEMDKEEMDQEMDKEMD--KEDKEEMDQEEMDKQDKEEMDQEMDKQDKE 193
Query: 403 STDEEEIDKNLATTDLDELVMNAANAENPE 492
D+EE+DK D+ M+ + EN E
Sbjct: 194 EMDQEEMDKQDKENKEDKEEMDKQDKENKE 223
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +1
Query: 283 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 462
+ A K +E R+R E +K K+EE L++++ + +E+E + L + +
Sbjct: 260 EEAEKKREEEERKRREEEEAAQKWKKEELLRQQQ---LEREKEEQERAERLQREREEAME 316
Query: 463 MNAANAENPEAQLAAVQQCRK 525
E EA+ AA + RK
Sbjct: 317 AEDLAEEAAEAEAAAAEAARK 337
>SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 207 NYTKKQRINIKLLSSKLIKHVLRHYTSDGGLTSIFTKYSTTHK 79
NY ++ + ++ L+S+ + + H D LTS Y+ HK
Sbjct: 128 NYAREHKRDVTSLTSQTLHYAREHKRDDTSLTSQTLHYAREHK 170
>SB_46871| Best HMM Match : PAN (HMM E-Value=1)
Length = 525
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 331 VTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 447
V ++ R N QK+ N+P S D E ID++L D
Sbjct: 380 VRLDSRTNSSSSKRQKKTNLPKSGENDVEIIDRSLVRDD 418
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 238 DKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVE-LRKNK--REETLQKRRNVPISYST 408
D + NR KN+ R RR E +V LR++K REE QKR + P S
Sbjct: 329 DNSVSPPRGNRGRREKNSASP-SRRRGRREETSVSPLRRSKDSREEETQKRVDAPRDPSP 387
Query: 409 DEEE 420
EEE
Sbjct: 388 MEEE 391
>SB_27445| Best HMM Match : DUF227 (HMM E-Value=9.9)
Length = 129
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -2
Query: 447 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 280
+GG+ V +D +IGRI FL CF + C P H C+ E
Sbjct: 5 IGGTSVSLDHRMIGRITRKLFVDFL-CFCNTAILRSSCKLQYLPIHVSVFSRCLFE 59
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +1
Query: 196 LCVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREET-L 372
+C + +T + Q R + +N+G + + + E + R+ +RE+ L
Sbjct: 1295 ICQSLEHAGKTPPALSSISQQLDTRREIQENSGTNQPQTTDKPKETRSQKRRRRREKAKL 1354
Query: 373 QKRRNVP---ISYSTDEEEIDKNLATTDLDELVMNAA 474
P I + D +E + + T++DE + AA
Sbjct: 1355 YASLRTPSDDIVLANDSKEENGRVIVTEIDEAIAKAA 1391
>SB_15433| Best HMM Match : Arm (HMM E-Value=9.7)
Length = 237
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 403 STDEEEIDKNLATTDLDELVMNAANAENPEAQ-LAAVQQCRKLLSCDKNPPID---ELIA 570
S +E E+ N A L L + A E L+ Q RKL+ C + I ++
Sbjct: 56 SVNELEVSYNAAGI-LCHLASDGPTAWTAETMSLSRGQAMRKLIDCVEKWDIGATRQMSY 114
Query: 571 AGILPILVQCLSRADNPALQFETAWALTNIAS 666
PIL + + + + PA+Q WAL N+ +
Sbjct: 115 RSFGPIL-RLIPKYETPAIQHWATWALANLCN 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,434,911
Number of Sequences: 59808
Number of extensions: 559934
Number of successful extensions: 1819
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -