Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0035
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 104 6e-23
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 78 7e-15
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 62 4e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 59 3e-09
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 57 1e-08
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 57 1e-08
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 53 2e-07
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 51 7e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 44 8e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 37 0.017
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.052
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 35 0.068
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 32 0.48
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 0.84
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 29 2.6
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 29 2.6
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18) 29 3.4
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 4.5
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.5
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 104 bits (250), Expect = 6e-23
Identities = 50/106 (47%), Positives = 72/106 (67%)
Frame = +2
Query: 251 QAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIIS 430
+AA +L E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+S
Sbjct: 65 KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVS 124
Query: 431 WLKKKTGPPAVEVTSAEQAKELIDANLLLYLVSFRTRAQPEPKLSF 568
WL KKTGPPA ++ +A+ K+ I + +V F T + + +F
Sbjct: 125 WLNKKTGPPAKDLATADAMKDFITKEVA--VVGFFTDKESDAAKAF 168
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/65 (53%), Positives = 51/65 (78%)
Frame = +3
Query: 60 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLA 239
M++L +AL+ LA +E+ EE+VLVL++ NF+ ++ +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 240 PEYAK 254
PEYAK
Sbjct: 61 PEYAK 65
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +3
Query: 45 ADNIAMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVISTTEY-ILVEFYAP 212
++N+ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 213 WCGHCKSLAP 242
WCGHCK LAP
Sbjct: 413 WCGHCKQLAP 422
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +2
Query: 272 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK--- 439
++ + I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+
Sbjct: 432 KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGG 489
Query: 440 KKTGPPAVE 466
K PA E
Sbjct: 490 KAGNEPAAE 498
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 505 QSVIVFGFFSDQSSTRAKTFLSTAQVVDDQVFAIVSDE 618
+ V V GFF+D+ S AK FLS A +DD F IVSD+
Sbjct: 149 KEVAVVGFFTDKESDAAKAFLSAADGIDDVEFGIVSDK 186
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 77.8 bits (183), Expect = 7e-15
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 AATKLAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDII 427
AA L + + P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II
Sbjct: 580 AAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGII 639
Query: 428 SWLKKKTGPPAVEVTSAEQAKELID 502
++KK+ GP +VE+ S + ++ +D
Sbjct: 640 RYMKKQAGPSSVEIKSVDHLEKKLD 664
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +3
Query: 132 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY 577
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 135 VLVLSKANFETVIST-TEYILVEFYAPWCGHCKSLAPEY 248
V V+ NF+ +++ T+ +L+EFYAPWCGHCKSL P+Y
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKY 902
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 338 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 451
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +3
Query: 111 DEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAK 254
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAK
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAK 102
Score = 70.9 bits (166), Expect = 9e-13
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2
Query: 251 QAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIIS 430
+AA K+ + P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+
Sbjct: 102 KAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVE 161
Query: 431 WLKKKTGP 454
++KK++ P
Sbjct: 162 YMKKQSDP 169
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +2
Query: 251 QAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIIS 430
+AA +L + + PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S
Sbjct: 217 KAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIAS 276
Query: 431 WLKKKTGPPAVEVTSAEQAKELI 499
+++ + GP + ++S + ++ +
Sbjct: 277 YMRSQVGPSSRILSSLKAVQDFM 299
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +3
Query: 120 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQ 263
P L L+K NF V++ +LVEF+APWCGHCK LAPEY K Q
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQ 220
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 287 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPP 457
I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK---- 630
Query: 458 AVEVTSAEQAKE 493
A S E+AK+
Sbjct: 631 ATVSLSKEKAKD 642
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 126 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAK 254
E +V+ K E V + +L+EFYAPWCG +L P + K
Sbjct: 525 EPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG--IALEPTFKK 565
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +3
Query: 123 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQSW 269
T+ V+ L+K NF+ V++ ++ LVEFYAPWCGHCK LAP Y + +++
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLGEAY 68
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +2
Query: 275 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKT 448
+ S + +AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KT
Sbjct: 70 QSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKT 129
Query: 449 G 451
G
Sbjct: 130 G 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 LALGDEVPTEENVLV-LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDY 173
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 120 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 242
P VL L+ NF I EY+LV+FYAPWC C+ L+P
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSP 88
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/44 (54%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 EENVLVLSKANFET-VISTTEYILVEFYAPWCGHCKSLAPEYAK 254
+E+V+ L+ NFE V+++ + LVEF+APWCGHC+ LAPE+AK
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAK 121
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Frame = +2
Query: 251 QAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQA 415
+AAT+L + +K+ +DAT A Y V+GYPT+K F G S DY GGR A
Sbjct: 121 KAATEL---KGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTA 177
Query: 416 DDIISWLKKKTG-----PPAVEVTSAEQAKE 493
DII + K P ++ S E KE
Sbjct: 178 SDIIQYALDKAADSIEPPEVIQAISNEVLKE 208
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 320 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 427
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +3
Query: 132 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY 52
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 126 EENVLV--LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQSW 269
E++ LV L ++F ++ TE++LV FYAPWCGHCK+ P+Y K +++
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETF 193
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 96 GLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQ 263
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y K Q
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQ 94
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 454
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 251 QAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIIS 430
+AA L +E++ LA VD T+ +D+A+ + GYPT+K ++ + + + ++
Sbjct: 91 KAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVK 150
Query: 431 WL 436
L
Sbjct: 151 QL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 114 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 245
E+P+E V LS F++ + +++LV FYAPWCGHCK PE
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPE 233
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 111 DEVP---TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQS 266
DE P T V+ L F+ ++ +LV FYAPWCGHCK++ PEY Q+
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQT 127
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2
Query: 254 AATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 361
AA L E+E P LA VDAT+E L + + V GYPT
Sbjct: 124 AAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 287 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTGPP 457
I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + GPP
Sbjct: 268 IAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREGPP 321
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 126 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAK 254
E + L+ +F+ + E +LV+FYAPWC C +L P+Y K
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEK 63
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 144 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 245
L+ NF+ +I + +LV+FYAPWC HC+ L P+
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQ 58
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +2
Query: 269 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 442
++E+ + +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 13 SKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 123 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 242
+E V +L+K F+ I + V+FYAPWC HC LAP
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAP 126
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 344 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 436
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 141 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
V SK F V+++ + +V+FYAPWCG C AP+Y
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 99 LALGDEVPTEENVLVLSKANF-ETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQSW 269
+AL + NV L +F +V S + V+F+APWC C L PEY K +S+
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSF 331
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 284 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 439
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +3
Query: 150 KANFETVISTTE--YILVEFYAPWCGHCKSLAPEYAK 254
+A F +VI+ T+ ++++FYA WCG C+ + P++ K
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKK 54
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 132 NVLVL---SKANFETVISTTEYILVEFYAPWCGHCKSLAPEYA 251
NV VL S+ E + T+ ++ +F A WCG CKS+AP Y+
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYS 50
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 266 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKK 445
L+E+ K+D Q+LA GV PT +FF+N +D G + +KK
Sbjct: 52 LSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKW 111
Query: 446 TG 451
G
Sbjct: 112 IG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 260 TKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 394
T L+ + + KVD Q Q AES G+R PT F+ N + ID
Sbjct: 51 TNLSMKFMDVVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 132 NVLVLSKANFETVI---STTEYILVEFYAPWCGHCKSLAPEY 248
NV+V+ +F +V + + ++++F A WCG CKS+AP +
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVF 50
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.7 bits (76), Expect = 0.068
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 162 ETVISTTEYILVEFYAPWCGHCKSLAP 242
+ VI+ + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 338 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 451
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.9 bits (69), Expect = 0.48
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +3
Query: 159 FETVISTTEYILVEFYAPWCGHCKSLAPEYAKQQQSW 269
F+ + E ++F A WCG C+ + P++ + + +
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEF 40
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 266 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 394
+AE++ + LAKVD +LA ++GV PT+ + G I+
Sbjct: 17 IAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVIN 59
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 266 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 397
+AE++ + LAKVD +LA ++GV PT+ + G +++
Sbjct: 63 IAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVMEH 106
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 31.1 bits (67), Expect = 0.84
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +3
Query: 129 ENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSL 236
+ ++ + N + + ++++ + FYAPW HC+ +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 132 NVLVLSKANFETVISTTEYILVEFYA 209
NV++L + NF+ VI+ + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +2
Query: 287 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 466
+ +A V+ +E +LA+ GV+ + F G ++Y G + + + + PP
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTN 162
Query: 467 VTSAEQAKELIDA 505
+ + +Q L DA
Sbjct: 163 IDNKKQRTLLEDA 175
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 156 NFETVISTTEYIL--VEFYAPWCGHCKSL 236
+F+ ++S++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 344 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 436
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18)
Length = 307
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 242 GIRQAATKLAEEESPIKLAKVDATQEQDLAESYGVRG 352
G+ Q A K A+ P+K +VDA + L+ Y V+G
Sbjct: 253 GVSQVAVKGAQMVIPLKSTQVDALVQLILSHGYDVKG 289
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3
Query: 213 WCGHCKSLAPEYAKQQQ 263
WCG CK+L P++A+ ++
Sbjct: 8 WCGACKALRPKFAESKE 24
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 290 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 391
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,928,452
Number of Sequences: 59808
Number of extensions: 348958
Number of successful extensions: 842
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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