Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0098
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 90 2e-18
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 57 1e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 56 4e-08
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 51 8e-07
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 49 3e-06
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 47 1e-05
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 46 3e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 45 7e-05
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 44 2e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 42 7e-04
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 42 7e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 41 9e-04
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 40 0.002
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.002
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 40 0.002
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 40 0.002
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 39 0.005
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 38 0.006
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 38 0.006
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 38 0.011
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 37 0.015
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 37 0.015
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 37 0.019
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 36 0.025
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 36 0.034
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 36 0.044
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 35 0.059
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 35 0.059
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_58997| Best HMM Match : PC_rep (HMM E-Value=4e-16) 31 0.96
SB_39416| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 31 1.3
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 30 1.7
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 30 1.7
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 30 2.2
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 30 2.2
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 29 5.1
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_54765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_43865| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 28 6.7
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 28 8.9
SB_5071| Best HMM Match : RIO1 (HMM E-Value=0) 28 8.9
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/83 (46%), Positives = 57/83 (68%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 429
+K+++ QWG IVD V+MK + RS+GFGF+TY + V+E + H +D R +EPKR+
Sbjct: 66 LKDYFSQWGTIVDCVIMK--RDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRS 123
Query: 430 VPREEIKRPEASATVKKLFVAGL 498
VPR+E PEA + +K+FV GL
Sbjct: 124 VPRDESGAPEAMSKTRKIFVGGL 146
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 692
EE L +YFS +G IV ++ K G+ RGFGFV ++ D V+ V +++H + D+ ++
Sbjct: 63 EEGLKDYFSQWGTIVDCVIM--KRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEP 120
Query: 693 KKAISKTDMSG 725
K+++ + D SG
Sbjct: 121 KRSVPR-DESG 130
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Frame = +3
Query: 513 EEDLGEYFSTF------GNIVSVSVVTDKETGKK-RGFGFVEFDDYDPVDRVCLQQNHQI 671
EED+ EYF++ G ++ V + D++ K+ RGF FV FD+ + V++VC + H+I
Sbjct: 152 EEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEI 211
Query: 672 KDQHLDVKKAISKTDM 719
+ + +VKKA ++ M
Sbjct: 212 RMKQCEVKKAEPQSAM 227
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 274 GEIVDVVVMKD-PKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 450
GE++DV + +D KR +GF F+T+ +V++ + H+I + E K+A P+ ++
Sbjct: 169 GEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQSAMR 228
Query: 451 RPE 459
+ +
Sbjct: 229 KKD 231
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 188 EPEHTRKLFIGGLDYRTTDSSLKNSMS 268
E E RK+FIGGL++ TT+ LK+ S
Sbjct: 45 ESEKLRKIFIGGLNWNTTEEGLKDYFS 71
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ----AHMVDEAQNNRPHKIDGRIVE 417
++E++E +GE+ DVVV+ D TK+S+GFG++T++ +++ + N H+IDG+ VE
Sbjct: 30 LREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVE 89
Query: 418 PKRAVPREEIKRPEASATVKKLFVAGLKLDMKKK 519
KRA+PR++ T KK+FV GL D K+
Sbjct: 90 VKRAIPRDDNSATSHEKT-KKIFVGGLPEDATKE 122
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 516 EDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQ----NHQIKDQH 683
E L EYF +G + V V+ D T K RGFG+V F DY V + H+I +
Sbjct: 28 ETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKE 87
Query: 684 LDVKKAISKTDMS 722
++VK+AI + D S
Sbjct: 88 VEVKRAIPRDDNS 100
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 429
I+ E+ + VD+++ K+ +TK +GF F+ + DE + + G++VE K+A
Sbjct: 128 IESLLEEKVDKVDLIMKKEDETKH-RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKA 186
Query: 430 VPRE 441
PR+
Sbjct: 187 TPRD 190
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 513 EEDLGEYFSTF--GNIVSVSVVTDKETGKK-RGFGFVEFDDYDPVDRVCLQQNHQIKDQH 683
+ED+ E + + V ++ KE K RGF FVE ++ D D +C + +K +
Sbjct: 121 KEDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCCVKKIHVKGKM 180
Query: 684 LDVKKA 701
++ KKA
Sbjct: 181 VEAKKA 186
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/53 (41%), Positives = 38/53 (71%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 408
+++ +E++GE+ + VVM+DP TKRS+GFGF+T+ VD N+ ++DG+
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +3
Query: 516 EDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVK 695
E L ++F FG + V+ D T + RGFGF+ F D VD V L Q LD K
Sbjct: 122 EGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVD-VVLNSG----AQELDGK 176
Query: 696 KAISKT 713
K ++ T
Sbjct: 177 KMVTTT 182
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDGRIVEPK 423
+KE++ ++GEI V DP T+RS+GFGF+ + + ++A+N + H+I GR+ E +
Sbjct: 131 MKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD---EDAKNVLSTSHRIQGRLCEVR 187
Query: 424 RAVPREEIKRPEASATVKKLFVAGLKLDMKKKT 522
P+EE+ P KKLFV L +KT
Sbjct: 188 LPRPKEELNVP------KKLFVGRLPESTTEKT 214
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 692
E ++ EYF+ FG I V D T + RGFGFV F + V L +H+I+ + +V
Sbjct: 128 ESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV-LSTSHRIQGRLCEV 186
Query: 693 KKAISKTDMS 722
+ K +++
Sbjct: 187 RLPRPKEELN 196
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 477 KVVCSWTEARHEEEDLGEYFS-TFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 653
K+ + +E + EYF + + + +T+ + ++RGF FV FD D VD++C
Sbjct: 104 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICE 163
Query: 654 QQNHQIKDQHLDVKKAISK 710
Q H I+ ++VK+A+ K
Sbjct: 164 TQFHNIEGNKVEVKRALPK 182
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI-KDQHLD 689
+E L EYFS +G +V V + D TG+ RGF FV+F D + + I K HL
Sbjct: 42 KESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPAAPIGKPPHLR 101
Query: 690 VKK 698
VKK
Sbjct: 102 VKK 104
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 429
+KE++ ++GE+V V + D T R +GF F+ + H+ + ++PK A
Sbjct: 45 LKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFK-------------HQSEADAIDPKPA 91
Query: 430 VPREEIKRPEASATVKKLFVAGLK 501
P I +P VKK+FV GLK
Sbjct: 92 AP---IGKP-PHLRVKKIFVGGLK 111
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 250 IKEFY-EQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 426
I+E++ + + + ++ + + + R +GF F+++ VD+ + H I+G VE KR
Sbjct: 119 IREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKR 178
Query: 427 AVPRE 441
A+P+E
Sbjct: 179 ALPKE 183
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 206 KLFIGGLDYRTTDSSLKNSMS 268
KLF+GGL Y TT SLK S
Sbjct: 30 KLFVGGLSYETTKESLKEYFS 50
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 408
+++F+ Q+GEI + VV+KD TK+SKG+GF+T + + + A N+ I+GR
Sbjct: 26 LRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGR 78
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 692
++ L ++F+ FG I V+ D+ T K +G+GFV D + C + I+ + +V
Sbjct: 23 DDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGRQANV 82
Query: 693 KKA 701
A
Sbjct: 83 NLA 85
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLD 689
EEE L E F+T GN+ SV ++ D++TG +GFG+V F+ D V N + K + +
Sbjct: 68 EEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIR 127
Query: 690 V 692
V
Sbjct: 128 V 128
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE--PK 423
++E + G + V +++D KT KGFG++ + V A + GR + P
Sbjct: 72 LRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPS 131
Query: 424 RAVPREE 444
+ P+ E
Sbjct: 132 KDKPQTE 138
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQ---H 683
+EDL FS FG I+S V+ D++TG+ + F+EF+ + +R + ++ + D H
Sbjct: 133 DEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKMDNVLIDDRRIH 192
Query: 684 LDVKKAISK 710
+D +++SK
Sbjct: 193 VDFSQSVSK 201
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN-HQIKDQHLD 689
EE L E FS G ++S +V D+ETGK +G+GF E+ D + N +++ + L
Sbjct: 38 EEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALR 97
Query: 690 VKKAISK 710
V A S+
Sbjct: 98 VDSAASE 104
Score = 35.9 bits (79), Expect = 0.034
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIVEPKR 426
+KE + + G ++ ++ D +T + KG+GF Y Q + +N ++++GR +
Sbjct: 41 LKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALRVDS 100
Query: 427 AVP---REEIKRPEASA 468
A +EEIK E +A
Sbjct: 101 AASEKNKEEIKSMEMTA 117
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 552 IVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ-QNHQIKDQHLDVKKAISKTDMSGG 728
++SV V+TD+ETG+ RGFGFV F D +D+ + + + + V KA + + GG
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGERGGG 94
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 277 EIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREE 444
++VDV V+ D +T+R +GF F+T+ S+ +M D + DGR ++ +A RE+
Sbjct: 254 DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQ 310
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV-DRVCLQQNHQIKDQHLD 689
E DL + FS + ++V V V++D+ET + RGF FV F + D + + + +
Sbjct: 243 EADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMK 301
Query: 690 VKKAISKTDMSGG 728
V +A S+ GG
Sbjct: 302 VNQARSREQRGGG 314
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 280 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREE 444
++ V V+ D +T R +GFGF+T+ +D+A + +DGR ++ +A PR E
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGE 90
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 241 RFFIKEFYE-QWGEIVDVVVMKDPKTKRSKGFGFITYSQ-AHMVDEAQNN-RPHKIDGRI 411
R + K F E ++ V + K P+ K S+ F F+ +S + ++D N H ID +
Sbjct: 25 RAYFKSFCEGSEADVSSVSLAKTPEGK-SRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQ 83
Query: 412 VEPKRAVPREEIKRPEASATVKKLFVAGLK 501
VE KRA+PR++ A KKLF+ GLK
Sbjct: 84 VEVKRAMPRDD-PNELAHVRTKKLFIGGLK 112
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 507 HEEEDLGEYFSTFGNI--VSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQ 680
H EED+ + + + +V D+ET K +G+ FV F + VD++ L ++ Q+K +
Sbjct: 115 HSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGK 174
Query: 681 HLDVKKA 701
+++KKA
Sbjct: 175 DVEMKKA 181
Score = 35.1 bits (77), Expect = 0.059
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +1
Query: 283 VDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 429
+++ +++D +T + KG+ F+ + H+VD+ R ++ G+ VE K+A
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 310 KTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATV 474
+ + KGFGF+T+ ++ +PH +DG+ ++PK AVPR ++ + A +
Sbjct: 137 RARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVM 191
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 597 RGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISK 710
+GFGFV F D ++ V ++ H + + +D K A+ +
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKK 596
EEDL EYFST+G +V V +E G++
Sbjct: 215 EEDLKEYFSTYG-MVEVKKAEYRERGQQ 241
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +3
Query: 471 R*KVVCSWTEARHEEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 650
R ++ ++ +ED+ + F T GN+ S ++ D+ TG+ G+ FV +D+ D ++
Sbjct: 26 RTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAV 85
Query: 651 LQQN 662
+ N
Sbjct: 86 REMN 89
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
+EE++ F FG I++ V+ D +G+ RG GFV FD
Sbjct: 125 KEEEVEALFKPFGKIITSKVLKDV-SGEGRGTGFVRFD 161
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +1
Query: 292 VVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPRE 441
++M D T+R +GFGF+T+ + D+A + + H I+ + VE K+A P+E
Sbjct: 1 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKE 50
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +3
Query: 576 DKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISKTDM 719
DK T + RGFGFV F+ + D+ C Q H I ++ ++VKKA K M
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKEVM 52
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNH-QIKDQHL 686
+E ++ + F FG + V ++ DKE+G+ RGFGFV D + + N + +++
Sbjct: 21 DEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNI 79
Query: 687 DVKKAISKTDMSGG 728
V A+ KT+ GG
Sbjct: 80 TVALALDKTENRGG 93
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKR 426
I++ +E++G + V +++D ++ RS+GFGF+ A + A + + GR +
Sbjct: 25 IEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNITVAL 83
Query: 427 AVPREE 444
A+ + E
Sbjct: 84 ALDKTE 89
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGRIVEPKR 426
+KE + G+IV + VM DP+ K SKGFGF+++ +EA N K I GR + R
Sbjct: 125 MKEICAEAGKIVSLKVMTDPEGK-SKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGR 183
Query: 427 AVPREEIKRPEASATVKK 480
A R E + E A ++K
Sbjct: 184 AKKRAE-RAAEVKAEIEK 200
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
++E + E + G IVS+ V+TD E GK +GFGFV F+
Sbjct: 121 DDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFE 157
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 671
++E L E FS +G I S V+ D + G +GFGFV F + + + N +I
Sbjct: 224 DDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTEMNGRI 276
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 423
++E + +G I VMKD K SKGFGF+ +S +A +++GRI+ K
Sbjct: 228 LREEFSPYGTISSAKVMKDDKGN-SKGFGFVCFSSPEEATKAVT----EMNGRILISK 280
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV-DRVCLQQNHQIKDQHLD 689
E+D+ F FG +V S+ + TGK +G+GF+E+++ D + + Q L
Sbjct: 212 EDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLR 271
Query: 690 VKKAIS 707
V +AI+
Sbjct: 272 VGRAIT 277
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 375
IK +E +G++V + K+P T + KG+GFI Y ++A
Sbjct: 215 IKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
EE + F FG I + + D K +GF FVE+D
Sbjct: 115 EEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYD 151
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 558 SVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKD-QHLDVKKAISKTDMSGG 728
+V+++TD+ETG+ RGFGFV F + +++ + + Q D + + V +A + D GG
Sbjct: 124 AVNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPRGDSGGG 181
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 289 VVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPR 438
V ++ D +T R +GFGF+T+ +++A + +DGR ++ A PR
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPR 175
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLD 689
+EE L +YF FG + SV ++ G R +GFV F D P V L+++H I + +D
Sbjct: 92 DEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEV-LKKSHVINGKTVD 149
Query: 690 VKKA 701
V K+
Sbjct: 150 VGKS 153
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLD 689
+E D+ YF +G + V ++TD+ETGK +G G V+ V+++ + H I +
Sbjct: 331 KELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKSQVR 390
Query: 690 VKK 698
+++
Sbjct: 391 LRR 393
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 417
+K+++EQ+GE+ V +M+ S+ +GF+ + E + H I+G+ V+
Sbjct: 96 LKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEVL-KKSHVINGKTVD 149
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 644
+E+ L E F ++V V V+TD+ETG+ RGFGFV F + +++
Sbjct: 17 DEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEK 60
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 277 EIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREE 444
++VDV V+ D +T R +GFGF+T+ +++A + DGR ++ +A PR E
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGE 85
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
+E+ L E F N+V V V+TD+ETG+ RGFGFV +
Sbjct: 94 DEQALEEKFHDC-NVVDVRVITDRETGRPRGFGFVTLE 130
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 280 IVDVVVMKDPKTKRSKGFGFIT 345
+VDV V+ D +T R +GFGF+T
Sbjct: 107 VVDVRVITDRETGRPRGFGFVT 128
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 534 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 662
F FG + SV ++ D ET + +G+GFV+F + + R Q N
Sbjct: 262 FEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMN 304
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 480 VVCSWTEARHEEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 638
V C DL E+FS G + V +++D+ + + +G ++EF D V
Sbjct: 148 VFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 200
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 375
+K +E +G + V ++ D +T RSKG+GF+ + +A A
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 366
++EF+ + G++ DV ++ D ++RSKG +I ++ V
Sbjct: 162 LEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 200
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = +3
Query: 423 TSSSKGRD*KTRS*CHR*KVVCSWTEARHEEEDLGEYFSTFGNIVSVSVVTDKETGKKRG 602
TSS+ GR R +VCS RH ED+ F +G I V VV DK T + RG
Sbjct: 9 TSSNSGRIDVDNPPFSRVFIVCS---KRHNAEDIRSAFEQYGTIEDVWVVKDKATKENRG 65
Query: 603 FGFVEF 620
+V+F
Sbjct: 66 VCYVKF 71
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 357
I+ +EQ+G I DV V+KD TK ++G ++ + +A
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKA 74
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 477 KVVCSWTEARHEEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 656
++ C + +E L F+ + + + +V DK++ K +G+GFV F D + + +
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMRE 277
Query: 657 QN-HQIKDQHL 686
N DQHL
Sbjct: 278 MNVLSFADQHL 288
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
+E+ L F FG+I V + D T K RGFGFVEF+
Sbjct: 17 DEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVP 435
+G+I DV + D T + +GFGF+ + A A N ++ GR + A P
Sbjct: 28 FGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNLAKP 83
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 626
+ DL + F FG ++S V DK+T + FGFV +D+
Sbjct: 290 DADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN 327
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 HEEED-LGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIK 674
H + D L + FS FG ++ VS+ K G+ +GF F+EF+ + V N + K
Sbjct: 98 HADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESK 154
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 537 STFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 647
+ F + V+ D+E+G+ RGFGFV++DD + +V
Sbjct: 307 AAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKV 343
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 VMKDPKTKRSKGFGFITYSQAHMVDEAQNNRP-HKIDGRIVEPKRAVPREE 444
V+ D ++ S+GFGF+ Y + + ++DGR V A PR E
Sbjct: 317 VIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRTE 367
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 620
+EDL F +FG+I V +V D +T + +G+G+V+F
Sbjct: 66 DEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPK 423
++ +E +G+I V +++D KT+ +KG+G++ + ++ A N + EPK
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCDKSLKAVWAEPK 126
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR--IVEPK 423
++ + +G I D+ +++ +T +SKGFG++TY A A H IDG+ I EPK
Sbjct: 79 LESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAESAQRALAG-THIIDGKWVIAEPK 136
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 692
+ L F +G I +S++ +TGK +GFG+V +++ + R L H I + +
Sbjct: 76 KSSLESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAESAQR-ALAGTHIIDGKWVIA 133
Query: 693 KKAISKTDMSG 725
+ + +++G
Sbjct: 134 EPKMPTRNLAG 144
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSV-SVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 668
+E+ L + FS FG I+ ++ D +TG +GF F+ F +D D N Q
Sbjct: 112 DEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQ 165
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 528 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 620
E F G +V+V + D+ T +G+GFVEF
Sbjct: 31 ELFLQSGPVVNVHMPKDRITQLHQGYGFVEF 61
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 298 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAV 432
+KD K+ RSK +GF+ + ++A N+PH I+G+ P V
Sbjct: 94 VKDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKSGPSSPV 138
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 262 YEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 420
+E+ G I D +M DP + +KGF F T+S DEAQ N K+D + + P
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNK---DEAQ-NAVKKLDNKEIRP 220
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = +3
Query: 543 FGNIVSVSVVTDKETGKKRGFGFVEFDD 626
+G IV+V++V DK+TGK++GF F+ ++D
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYED 29
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 271 WGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIV 414
+GEIV+V +++D KT + KGF F+ Y Q + N K+ GR +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTI 50
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = +3
Query: 543 FGNIVSVSVVTDKETGKKRGFGFVEFDD 626
+G IV+V++V DK+TGK++GF F+ ++D
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYED 29
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 271 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 384
+GEIV+V +++D KT + KGF F+ Y A +N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDN 39
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 498 EARHEEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
+A ++DL +G I+S + DK+T +G+GFV+F+
Sbjct: 108 KANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFE 149
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY 629
+E+D+ E FS +G I ++ V D+ TG +G+ VE++ +
Sbjct: 305 QEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETF 344
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
E + + F +GNIV+ ++ DK TG +G GFV +D
Sbjct: 146 EAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYD 182
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN-HQIKDQHLD 689
++ + E FS +G + +V + TD+ RGF +VE+ D + ++ + QI Q +
Sbjct: 1170 KDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIA 1229
Query: 690 VKKAI 704
V+ +
Sbjct: 1230 VQSVL 1234
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 35.9 bits (79), Expect = 0.034
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 537 STFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC-LQQNHQIKDQHLDVKKAISKT 713
S G + +V + TDK TG++R FGFVEF V L ++ D+ ++VK +
Sbjct: 478 SNAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINVKPQSNNQ 537
Query: 714 D 716
D
Sbjct: 538 D 538
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 522 LGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 626
L + F FG ++S V DK+T + FGFV +D+
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN 312
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFG 608
+ DL + F FG ++S V DK+T + FG
Sbjct: 242 DADLMQTFQPFGTVISAKVFIDKQTNMSKCFG 273
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/64 (25%), Positives = 37/64 (57%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 429
++ F+E++G + + +++D K SKG+ FIT+ + D ++N+ +++ +A
Sbjct: 24 LRAFFEEYGVVKESKIVRD-KHGVSKGYAFITFESQEVADGLRDNKGLDFKDKVLSIGQA 82
Query: 430 VPRE 441
V R+
Sbjct: 83 VRRK 86
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDV 692
E + EYFST G V +GK +GF FV + V+ V + +H I + + +
Sbjct: 55 ESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSM 114
Query: 693 KK 698
+K
Sbjct: 115 EK 116
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDG 405
I E + GEI V + ++ KTK KG +T++ E R H I G
Sbjct: 137 ILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHG 188
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 35.1 bits (77), Expect = 0.059
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 620
E G+ S +GNI + +V + TG +G+GFVE+
Sbjct: 126 ETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEY 161
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 417
IKE + Q G + V +P S+GF F+ Y+ A ++ Q R H +GR VE
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQ--RAH--NGRQVE 273
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 528 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 620
E FS GN+ V + G RGF FV++
Sbjct: 224 ELFSQTGNVTFAQVAINPANGGSRGFAFVDY 254
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 35.1 bits (77), Expect = 0.059
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +1
Query: 238 HRFF---IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 351
H FF IK+F+EQ+G + + + + K+ RSKG+ F+ ++
Sbjct: 107 HGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFA 147
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNH 665
E ++ ++F FG + + + K++ + +G+ FVEF D V ++ H
Sbjct: 111 ENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +3
Query: 516 EDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEF-------DDYDPVDRVCL 653
EDL + F +G++ + + D+ T + RGF FV F D D +D CL
Sbjct: 30 EDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDCMDATCL 82
Score = 34.3 bits (75), Expect = 0.10
Identities = 10/44 (22%), Positives = 28/44 (63%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 381
+K+ ++++G++ D+ + +D T S+GF F+ + + ++A +
Sbjct: 32 LKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
+E ++ E FS G + V +VT++ GK +G+G+VE++
Sbjct: 183 KESEIEELFSKHGVVKQVRLVTNR-AGKPKGYGYVEYE 219
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDGRIVEPK 423
+KE +GE+ ++KD T SKG+ F Y + D A N D +++ +
Sbjct: 689 VKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQLGDKKLIVQR 748
Query: 424 RAV-PREEIKRPEASATV-KKLFVAGLKLDM 510
+V ++ + P+A V +L + GL + M
Sbjct: 749 ASVGAKQNLNNPQAMNMVPAQLQIPGLDISM 779
>SB_58997| Best HMM Match : PC_rep (HMM E-Value=4e-16)
Length = 181
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 592 RKGALVL*SLMIMIQLTEYACNKITKLK 675
R+GALV S +I+IQ TE+ C+K+ K +
Sbjct: 125 RQGALVA-SALILIQQTEHTCSKVAKFR 151
>SB_39416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 592 RKGALVL*SLMIMIQLTEYACNKITKLK 675
R+GALV S +I+IQ TE+ C+K+ K +
Sbjct: 397 RQGALVA-SALILIQQTEHTCSKVAKFR 423
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 280 IVDVVVMKDPKTKRSKGFGFI---TYSQAHMVDE--AQNNRPHKIDGRIVEPKRAVPREE 444
I D+ ++KD T S+GF F+ T +A + E A N P IDGR++ A E
Sbjct: 436 IYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVITTLYARKSEP 495
Query: 445 IKRPEASAT 471
P +T
Sbjct: 496 SPVPTTKST 504
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
E++ L E ++ V +V +K G RGFGFVEFD
Sbjct: 344 EDDVLQELYAAEVAFRDVRIVRNK-IGYTRGFGFVEFD 380
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 579 KETGKKRGFGFVEFDDYDPVD 641
+E K G+GFVEFDDY D
Sbjct: 32 REISMKLGYGFVEFDDYRDAD 52
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 286 DVVVMKDPKTKRSKGFGFITY 348
+V V+KDP +SKGFGF+++
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSF 561
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDK--ETGKKRGFGFVEF 620
E L E FS FG + SV K +K GFGFV+F
Sbjct: 260 EAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 426
I ++Q+G+I V+ D T+ SKG F+ Y A V + +G ++ R
Sbjct: 432 ITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDEDSEGLFLDGNR 490
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVV--MKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEP 420
+KE + +GE+ + V K + R GFGF+ ++ +A + KI GR V
Sbjct: 263 LKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAV 322
Query: 421 KRAVPR 438
AVP+
Sbjct: 323 DWAVPK 328
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY-DPVDRV 647
E D+ ++ +G I +S+ KRG+GFVEFDD+ D D V
Sbjct: 702 ESDVEKFLRGYGKIRDISL--------KRGYGFVEFDDHRDAEDAV 739
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 408
+KE +E++GE++DV + K P + + F+ +++ +A+ + GR
Sbjct: 265 LKEAFERYGEVIDVDIKKQP---GNNPYAFVQFAELSSAIQARRKMDREYVGR 314
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRG 602
E +L +FS FG + V +V D+ TG +G
Sbjct: 1079 ELELETFFSNFGPVADVRIVCDRRTGLNKG 1108
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 250 IKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 378
++E + G I + + KD T +SKGF FI + H D A+
Sbjct: 197 LQELFRPLGPISRIFLAKDKFTNQSKGFAFINF--VHREDAAR 237
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 662
E L E F+ FG + V ++ D E+GK R GFV F D + + N
Sbjct: 537 ENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAEAANVGMN 585
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 561 VSVVTDKETGKKRGFGFVEF-DDYDPVD 641
V VV D+ET + R FG+V F D+ D D
Sbjct: 5 VIVVYDRETRRSRNFGYVTFRDEQDAAD 32
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +1
Query: 286 DVVVMKDPKTKRSKGFGFITY 348
+V+V+ D +T+RS+ FG++T+
Sbjct: 4 EVIVVYDRETRRSRNFGYVTF 24
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Frame = +1
Query: 280 IVDVVVMKDPKTK-------RSKGFGFITYSQAHMVDEAQNNRPHK-IDGRIVEPKRAVP 435
+ DV+++K+P+ + RS+GFGF+T++ A + K + GR ++ ++
Sbjct: 77 VTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSIS 136
Query: 436 R 438
R
Sbjct: 137 R 137
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKR 599
EE+DL F +G I ++++ DK TG+ +
Sbjct: 182 EEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 265 EQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 354
E+ GEI + + DP T +KGF F T+++
Sbjct: 174 EKCGEIREFRLQMDPATGLNKGFAFCTFTE 203
>SB_54765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 522 LGEYF-STFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKK 698
+GEY +++S+S + R VE+ D+ P D+ + + H ++K
Sbjct: 28 MGEYIRQAQKHVISISETISRTAYNVR-LALVEYRDHPPQDKSFVTRVHDFTSDVKEMKV 86
Query: 699 AISKTDMSGG 728
+ K SGG
Sbjct: 87 WVDKMSASGG 96
>SB_43865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 522 LGEYF-STFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKK 698
+GEY +++S+S + R VE+ D+ P D+ + + H ++K
Sbjct: 28 MGEYIRQAQKHVISISETISRTAYNVR-LALVEYRDHPPQDKSFVTRVHDFTSDVKEMKV 86
Query: 699 AISKTDMSGG 728
+ K SGG
Sbjct: 87 WVDKMSASGG 96
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 519 DLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 668
DL FS +G +V +VT+ + + FG V + + C+Q H+
Sbjct: 364 DLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAK-CIQHLHR 412
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 304 DPKTKRSKGFGFITYSQAHMVDEAQNNRPHKI-DGRIVEPKRAVPREEIK 450
+P R +GFGF+T++ A ++A+ I DGR VE + + I+
Sbjct: 117 NPLNLRIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSLCMEQSYIR 166
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 510 EEEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 623
+EE++ E F +G + V + K++GFGF+ D
Sbjct: 64 DEEEMKEMFKKYGEVAEVFI------NKEKGFGFIRLD 95
>SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 400 DGRIVEPKRAVPREEIKRPEASATV 474
D R VEP ++P E+KR A +V
Sbjct: 99 DNRAVEPPESIPNSEVKRSIADGSV 123
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 528 EYFSTFGNIVSVSVVTDKETGKKRGFGF 611
EY S G+ S++ DKETG GF
Sbjct: 45 EYLSVHGDKADASIIHDKETGITTKIGF 72
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 513 EEDLGEYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 662
E+D+ ++F T+G ++ K G+GFVEFD D + + N
Sbjct: 16 EDDVKKFFYTYGRFKIREIIL------KDGYGFVEFDYSDDAEDAVYECN 59
>SB_5071| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 556
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 621 DDYDPVDRVCLQQNHQIKDQHLDVKKAISKT 713
D DPVD Q+N Q +D++ D +K KT
Sbjct: 406 DGEDPVDEDVRQENKQTRDENQDNEKEPPKT 436
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,202,021
Number of Sequences: 59808
Number of extensions: 401142
Number of successful extensions: 1535
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -