Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0096
(816 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 52 4e-07
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 44 1e-04
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 37 0.022
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.052
SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 31 1.1
SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) 30 2.0
SB_25449| Best HMM Match : Exo_endo_phos (HMM E-Value=7.4e-07) 30 2.6
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5) 29 4.5
SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02) 29 4.5
SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_9694| Best HMM Match : IclR (HMM E-Value=5) 29 4.5
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07) 29 4.5
SB_6561| Best HMM Match : HEAT (HMM E-Value=0.028) 29 4.5
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_39636| Best HMM Match : WSC (HMM E-Value=0.34) 29 6.0
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 28 7.9
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/62 (35%), Positives = 40/62 (64%)
Frame = +1
Query: 271 EASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 450
E + + KL L+ WCPD ++K +M+ +++F +KK G K ++ + SE S EA++E+
Sbjct: 323 EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKKCPGGAKCLEIQERSELSFEALKEE 382
Query: 451 LR 456
L+
Sbjct: 383 LK 384
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +1
Query: 271 EASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 450
E +++ KL L+ WCPD +K KM+ +++F + K G K ++ D + S EA++EK
Sbjct: 76 EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCPGGAKCLEIQDRFDLSFEALKEK 135
Query: 451 LR 456
L+
Sbjct: 136 LK 137
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1
Query: 295 FLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 423
FL C D A +KKKML S+++ LKK G++KY +A+++ E
Sbjct: 256 FLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 292 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRAT 462
L +SWC D A ++KKM +S+ D ++K + A D + + + K T
Sbjct: 93 LVFISWCSDKAPIEKKMKLASTQDYVRKKFSEATTSVNANDFDDLDYDEIAAKAEKT 149
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 35 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 193
SG+ V D + +K K H+Y +F I DE + V ++V E ++ F +
Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63
Query: 194 LQKGGTGECRYGLFDFEY 247
++K E RY L+D ++
Sbjct: 64 VEKLSDREPRYILYDMKF 81
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +1
Query: 292 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 450
L + WC D A +KK+M+ +++ + LK V V+K Q D ++ + + + +K
Sbjct: 93 LVYIFWCSDNAPIKKRMVSAATNELLKTKFV-VKKVFQINDRADLNYDDIADK 144
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Frame = +2
Query: 35 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 181
SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A ++Q
Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63
Query: 182 FLEDLQKGGTGECRYGLFDFEY 247
LE L E RY L+D +
Sbjct: 64 MLEKL---SDSEPRYILYDLNF 82
>SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 816
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 159 NATPNTNSSSRICRRAVPGNADMACLTLNTRTVPGHVGG*QETEALPDVVVPGH 320
N NT+++SR AV G D CLT NT P V T++L DVV+ H
Sbjct: 137 NMDMNTDTNSRGPHPAVTGFCDQFCLT-NTIVHPTRVA--SSTKSLLDVVLVSH 187
>SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)
Length = 1226
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -3
Query: 460 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTT 305
W G + R PP RS+ TS L TF ERR W P T+
Sbjct: 855 WGGTAERPPPRQSAPSRSMAITSLLCGSTF-ERRTTVLSMGVVSDWSIPATS 905
>SB_25449| Best HMM Match : Exo_endo_phos (HMM E-Value=7.4e-07)
Length = 366
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 159 NATPNTNSSSRICRRAVPGNADMACLTLNTRTVPGHVGG*QETEALPDVVVPGH 320
N NT+++SR AV G D CLT NT P V T++L DVV+ H
Sbjct: 190 NMDMNTDTNSRGPHPAVTGFCDQFCLT-NTIVHPTSVT--SSTKSLLDVVLVSH 240
>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -1
Query: 246 YSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 154
YS +RPY HSPV P+C S R YS + P
Sbjct: 112 YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145
>SB_58267| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.5)
Length = 722
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 405 SDRPLGSVSGGRRREAPRHRSPINSIYTRARDETDPLSDTPALTTRGHDTTSRLVLLQRK 584
+ + + S++GG + +P + P T +ET P +D + T DT+S R
Sbjct: 179 NSKGVSSLAGGEVKASPSTKQPT----TVQANETCPEADVSSFETETADTSSSTTSRARN 234
Query: 585 TNSIN 599
TN+ N
Sbjct: 235 TNAQN 239
>SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02)
Length = 385
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 462 RSPINSIYTRARDETDPLSDTPALTTRGHDTTSRLVLLQR---KTNSINMIDFTGGRTSC 632
R PIN + +ET L T + H T S L++L R K ++ + D+T C
Sbjct: 223 RVPINQVVLFDMEETKELLGTAVFSFMCHHTISSLIMLIRDKHKALAVFLFDYTIELLYC 282
Query: 633 ESARVGT 653
S VGT
Sbjct: 283 -SVLVGT 288
>SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1690
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 361 DALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATKPTRSPTLLP*RH 540
D LKK + +QK +L +AS E EEK + + + F H++A K +P RH
Sbjct: 403 DGLKKRMEQIQK-----ELQQASSELEEEKKKTENLLSSIFPHDVANKLINKQP-IPARH 456
>SB_9694| Best HMM Match : IclR (HMM E-Value=5)
Length = 282
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +3
Query: 171 NTNSSSRICRRAVPGNADMACLTLNTRTVPGHVGG*QETEALPDVVVPGH 320
NT+++SR AV G D CLT NT P V T++L DVV+ H
Sbjct: 4 NTDTNSRGPHPAVTGFCDQFCLT-NTIVHPTSVT--SSTKSLLDVVLVSH 50
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 738 CHPYSY--NGCPALQTETHYCFTAEIGRGRWYLPARTHKRSYH 616
CHP N C +T+ + C + + WY P++T YH
Sbjct: 437 CHPTKTQANWCHPTKTQANLCHPTKT-QANWYHPSKTQANWYH 478
>SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07)
Length = 2008
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +3
Query: 387 SSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETDPLSDTPALTTRGHDTTSRL 566
S E++P PLG++ G RE R S + + + D D + P T +T
Sbjct: 947 SIEINPQSTPLGALVIGGNRETGRTCSELR-LQAQVTD-LDLETGVPNCTWACQTSTGAT 1004
Query: 567 V-LLQRKTNSINMIDFTGGRTSCESARVGTT 656
R +I+ R CE RVGTT
Sbjct: 1005 CGSATRVGQTISPASSCDSRVPCEEFRVGTT 1035
>SB_6561| Best HMM Match : HEAT (HMM E-Value=0.028)
Length = 1444
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 402 PSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETDPL 515
P PLGSV R P H P+ S+YTR+ DPL
Sbjct: 1072 PQIDPLGSVF---TRSGP-HIDPLRSVYTRSGPHIDPL 1105
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -3
Query: 454 GASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTSGRAS 287
G + R PP R + TS L TF ERR W P T +G AS
Sbjct: 651 GTAERLPPRQSAPSRFMAITSLLCGSTF-ERRTTVLSMGVVSDWSVPATRCAGTAS 705
>SB_39636| Best HMM Match : WSC (HMM E-Value=0.34)
Length = 390
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 630 CESARVGTTAPCLFLP*SSNAFRFEGRGSRCNYMGGTFML 749
C+S TT+ C++L NA RC +GGTF L
Sbjct: 207 CKSGWHSTTSRCIYL--MPNATYPGSTAERCRLLGGTFFL 244
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 7.9
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = +3
Query: 360 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETDPLSDTPALTT 539
RRS + PCR S +D LG R R SP S T E AL
Sbjct: 238 RRSSEAPCRQSRRSSNDARLGQFVEKRNFHGNRFVSPKKSKKTEVNREDSIEQYLEALQQ 297
Query: 540 RGHDTTSRLVL 572
+TSRL L
Sbjct: 298 EA--STSRLKL 306
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 7.9
Identities = 26/107 (24%), Positives = 41/107 (38%)
Frame = +3
Query: 354 LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETDPLSDTPAL 533
+V +P + H S R + S RR + R P T + D D +
Sbjct: 335 VVNVESALPLITRPSHCSSRVSPAPSNTSRRSSSRGSVPRPRRST-SHDRRSSSRDRLEM 393
Query: 534 TTRGHDTTSRLVLLQRKTNSINMIDFTGGRTSCESARVGTTAPCLFL 674
R + RL + R++ S + I +GGR S + CLF+
Sbjct: 394 RDRRSASRDRLQMRNRRSASRDRIPSSGGRRRSPSPSEQNSCQCLFV 440
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 7.9
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 384 RSSEVHPSDRP-LGSVSGGRRREAPRHRSPINS-IYTRARDETDPLSDTPALTTR----- 542
RSS + P R LGS++ R PR RS + S +R R + P + + ++R
Sbjct: 183 RSSSISPGMRSSLGSIAPPPRTSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESARG 242
Query: 543 GHDTTSRLVLLQRKTNSINMIDFTGGRTSCESAR 644
TT+ + RK+ N + T +T C + R
Sbjct: 243 TRTTTTTKKCVTRKSRGRNGSNTT--KTKCVTTR 274
>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
Length = 643
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 165 TPNTNSSSRICRRAVPGNADMAC 233
+P T SSR C VPG+AD C
Sbjct: 14 SPRTGRSSRSCSIPVPGHADHHC 36
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,924,294
Number of Sequences: 59808
Number of extensions: 539433
Number of successful extensions: 1695
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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