Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0069
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81) 37 0.020
SB_21890| Best HMM Match : PDEase_I (HMM E-Value=2.5e-07) 33 0.18
SB_9575| Best HMM Match : PDEase_I (HMM E-Value=0.00012) 33 0.18
SB_20752| Best HMM Match : hATC (HMM E-Value=0.04) 33 0.32
SB_20937| Best HMM Match : hATC (HMM E-Value=0.04) 32 0.42
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1) 30 1.7
SB_24284| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_20777| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 30 2.3
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 29 3.9
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 28 6.9
SB_53232| Best HMM Match : OAR (HMM E-Value=0.92) 28 6.9
SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 28 6.9
SB_47440| Best HMM Match : SURF6 (HMM E-Value=0.96) 28 6.9
SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 28 6.9
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_22563| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_10675| Best HMM Match : SURF6 (HMM E-Value=1.3) 28 6.9
SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40) 28 6.9
SB_27561| Best HMM Match : DUF720 (HMM E-Value=0.47) 28 6.9
SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85) 28 9.1
SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6) 28 9.1
SB_41708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_23065| Best HMM Match : PID (HMM E-Value=1) 28 9.1
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
Length = 461
Score = 36.7 bits (81), Expect = 0.020
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +2
Query: 407 KEQRCTVYNSGKNRKSSVQKGRHNPKNCHT*STSKPT--KAEISTNIEALVKDGNLAQAM 580
K+ + KN K SV + + K + K K + ++ + D + +
Sbjct: 160 KKSKLGKSKEAKNSKKSVVGKKKHEKKAESKKADKKVSKKVVLMKGVQTVTIDHKTMKII 219
Query: 581 DVLLKSIEVGTMPKSNVVKYL--LKNLAEEGNVEKIQQLGKNISENTKRKVT 730
+ KS+ + KS + KYL L+ EGNV+K+++ K ++ KRK T
Sbjct: 220 KKIPKSLLHKLLKKSKLDKYLKLASFLSIEGNVKKMKKGSKQAKDSAKRKTT 271
>SB_21890| Best HMM Match : PDEase_I (HMM E-Value=2.5e-07)
Length = 229
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 333 WTLLQEESEVPSNQFLVYLGNHLKSKNRDVPFIIPEKIEKVQSKKEDIIQKIVTPKVPQ- 509
W L E+S +Q Y + +K + RD IP+K E+ + + ++ Q+ K P+
Sbjct: 124 WQELGEKSM--DDQAKNYSNSPIKERTRDKDVAIPQKKEEPTNDERNVRQQRQKTKSPEN 181
Query: 510 NQQRPKSPQTSRPLLKTE-TWHKQWTSCLNRLK*APCPNR 626
N R +S +TSR K+ + + + + R+K P +
Sbjct: 182 NNSRSQSRKTSRDSRKSSGSKRSEKKTSIERMKSLPAQTK 221
>SB_9575| Best HMM Match : PDEase_I (HMM E-Value=0.00012)
Length = 286
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 333 WTLLQEESEVPSNQFLVYLGNHLKSKNRDVPFIIPEKIEKVQSKKEDIIQKIVTPKVPQ- 509
W L E+S +Q Y + +K + RD IP+K E+ + + ++ Q+ K P+
Sbjct: 96 WQELGEKSM--DDQAKNYSNSPIKERTRDKDVAIPQKKEEPTNDERNVRQQRQKTKSPEN 153
Query: 510 NQQRPKSPQTSRPLLKTE-TWHKQWTSCLNRLK*APCPNR 626
N R +S +TSR K+ + + + + R+K P +
Sbjct: 154 NNSRSQSRKTSRDSRKSSGSKRSEKKTSIERMKSLPAQTK 193
>SB_20752| Best HMM Match : hATC (HMM E-Value=0.04)
Length = 578
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/99 (21%), Positives = 46/99 (46%)
Frame = +2
Query: 440 KNRKSSVQKGRHNPKNCHT*STSKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMP 619
+ RK +V +G + + + + +PTK +E + + + +V + +
Sbjct: 42 RERKIAVNQGGNRRGSRNKPTYYEPTKVSAKQRVEEFKGEDLIVRNNEVYCAACKEVVSV 101
Query: 620 KSNVVKYLLKNLAEEGNVEKIQQLGKNISENTKRKVTYD 736
K +++K +K+ E N EK+++LGK + + YD
Sbjct: 102 KMSIMKVHVKSKKHELNKEKLKKLGKREEDIVQALHKYD 140
>SB_20937| Best HMM Match : hATC (HMM E-Value=0.04)
Length = 606
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/99 (21%), Positives = 46/99 (46%)
Frame = +2
Query: 440 KNRKSSVQKGRHNPKNCHT*STSKPTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMP 619
+ RK +V +G + + + + +PTK +E + + + +V + +
Sbjct: 42 RKRKIAVNQGGNRRGSRNKPTYYEPTKVSAKQRVEEFKGEDLIVRNNEVYCAACKEVLSV 101
Query: 620 KSNVVKYLLKNLAEEGNVEKIQQLGKNISENTKRKVTYD 736
K +++K +K+ E N EK+++LGK + + YD
Sbjct: 102 KMSIMKVHVKSKKHELNKEKLKKLGKRKEDIVQALHKYD 140
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -1
Query: 161 CRACNPGVSRIRRACL-SLPHST--NASTKSCRMFTSPCICVLKSASHC 24
C AC G+ + C+ S P T + T SC+ C K+ASHC
Sbjct: 687 CTACMLGLHLYNKTCVPSCPSGTYLDRDTNSCQQCGQTCQECTKTASHC 735
>SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1)
Length = 436
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/71 (23%), Positives = 38/71 (53%)
Frame = +3
Query: 300 NADETDKALGLWTLLQEESEVPSNQFLVYLGNHLKSKNRDVPFIIPEKIEKVQSKKEDII 479
+++E D+ G T+++ + V + + +L NH K++ ++PE + + SKK I
Sbjct: 133 SSEEKDQDGG--TIMELQKHVEFMKSVTFLMNHNKAEENQEEQVVPETVSRAISKKGTEI 190
Query: 480 QKIVTPKVPQN 512
+ + ++ QN
Sbjct: 191 IRCLFNQLSQN 201
>SB_24284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK+ ++G P+ +T K ++
Sbjct: 82 KKRVTDKAKDKLPQTPEKKAEVLETLINSPRTRKTLSRQGVVKTPEEEKESNTLKALASD 141
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 142 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 184
>SB_20777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 154 ARHRRLDDACQRYVE--EGKSEYLEGLLEATKELSQLIAQTSSTIYSLHTV 300
AR+R+ D C ++ GKS YL+G +E T +L ++ + S+ + T+
Sbjct: 330 ARYRQ-DQHCALEIQCASGKSTYLKGFVELTPDLKEVARRKRSSFFQKKTL 379
>SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1261
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = -1
Query: 248 SSFVASSNPSKYSDFPSSTYR*QASSKRLCRACNPGVSRIRRACLSLPHSTNASTKSCRM 69
++ + P Y PSS ++ Q + CR C P S RR + S+ A +S +
Sbjct: 413 ANMCSEMKPRVYRQIPSSDHQDQGHTT--CRTC-PHYSTGRRPLKAQKDSSTAD-RSGQS 468
Query: 68 FTS----PCICVLKSASHCNWLAS 9
F S PC VL + + +W AS
Sbjct: 469 FVSTPGSPCYYVLVARDNSHWRAS 492
>SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 623 SNVVKYLLKNLAEEGNVEKIQQLGKNISENTKRKVTYD 736
SN ++Y+L+++ E I + K+ S KRK+T++
Sbjct: 32 SNEIRYVLRHMGENIPEHDINDILKDASHGRKRKITFE 69
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 450 KVQSKKEDIIQKIVTPKVPQNQQRPKS 530
K+ K ++ K VTPK+P NQQ+P++
Sbjct: 1326 KLNGKGDESPGKTVTPKLPVNQQQPRN 1352
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 461 QKGRHNPKNCHT*STSKPTKAEISTNIEALVKDGNLAQA 577
++G H+ + S SKP K +++T A +DG A A
Sbjct: 580 RRGSHDKRELFAYSNSKPAKKQLNTKTTAQKRDGKPATA 618
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +3
Query: 399 LKSKNRDVPFIIPEKIEKVQSKKEDIIQKIV-TPKVPQ-----NQQRPKSPQTSRPLLKT 560
++SK D I+ ++ E++ S ++ TP PQ N+ R SP++SRPL ++
Sbjct: 255 IESKESDSNVIVNDQFEEIVSGVSNVETSCTSTPSPPQGEVVENETRSGSPKSSRPLARS 314
>SB_895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 348 EESEVPSNQFLVYLGNHLKSKNRDVPF 428
+ S +N+ L++ GN KSKN D+PF
Sbjct: 156 KRSHAKANKGLLFSGNLNKSKNLDIPF 182
>SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 125 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALASD 184
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 185 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 227
>SB_53232| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 806
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 147 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALASD 206
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 207 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 249
>SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 838
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 125 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALASD 184
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 185 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 227
>SB_47440| Best HMM Match : SURF6 (HMM E-Value=0.96)
Length = 279
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 57 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALTSD 116
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 117 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 159
>SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 125 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALASD 184
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 185 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 227
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 389 RKPFEIKEQRCTVYNSGKNRKSSVQKGRHNPKNCHT*STSKPTKAEISTNIEA 547
R P EIK + T + KN K++V + +NP +TS P ++S +A
Sbjct: 335 RSPQEIKLEIKTEAETTKNTKTAVVRPGYNPFEDEDEATSPPPLPDVSDKKQA 387
>SB_22563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 578 MDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKIQQLG 694
MDVL +++E+G +P VV + LA +V + QLG
Sbjct: 280 MDVLERTVELGRLP---VVNFAAGGLATPADVSLLMQLG 315
>SB_10675| Best HMM Match : SURF6 (HMM E-Value=1.3)
Length = 244
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 22 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALTSD 81
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 82 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 124
>SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40)
Length = 956
Score = 28.3 bits (60), Expect = 6.9
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 350 RKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKG-RHNPKNCHT*STSKPTKAE 526
+KR T+ LP+ P + E T+ NS + RK ++G P+ +T K ++
Sbjct: 811 KKRVTDKVKDKLPQTPEKKAEVLETLINSPRTRKILSRQGVVKTPEEEKESNTLKALASD 870
Query: 527 ISTNIEALVKDG-NLAQAMDVLLKSIEVG-TMPKSNVVKYLLK 649
IS ++ + + G N +A LKS+ G + KS K L K
Sbjct: 871 ISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRAKKSLGK 913
>SB_27561| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 779
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +3
Query: 327 GLWTLLQEESEVPSNQFLVYLGNHLKSKNRDVPFIIPEKIEKVQSKKEDIIQKIVTPKVP 506
G W ++ + + LV L ++ KS + P I P + V +K+D +I TP+
Sbjct: 131 GKWLIVIVVQVIKAALRLVLLFSY-KSGIQRAPLIPPLDRKSVFPEKQDGENEIKTPEEE 189
Query: 507 QNQQRPKSP-----QTSRPLLK 557
+ + P+SP +T RP+ K
Sbjct: 190 KKPKEPQSPVWKGTRTGRPMRK 211
>SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85)
Length = 1459
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = -2
Query: 220 PSTLISLPQRIADKRHPSVCVEPAILVFREYDVPVSVFRTQRTQVLNHVECLLHRVSVYL 41
PS +SL Q I HPSV V ++ VSV Q H+ CL VSV L
Sbjct: 344 PSVSVSLGQSIWYHTHPSVSVSLGQSIWYHTHPSVSVSLGQSIWYHTHLVCL---VSVSL 400
Query: 40 NQ 35
Q
Sbjct: 401 GQ 402
>SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6)
Length = 163
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 226 ILPSTLISLPQRIADKRHPSVCVEPAILVFREYDVPVSVFRTQRTQVL 83
+LP T+ +L + IA R+ + V P+I R Y+V + RT L
Sbjct: 39 LLPQTVHTLRRGIARSRNITSTVTPSIEPERHYNVSICPINRTRTAAL 86
>SB_41708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 399 LKSKNRDVPFIIPEKIEKVQSKKEDIIQKIVTPKVPQNQQRPKSPQT----SRPLLKTET 566
+K +++DVPF+ E + +++K++ K + K P+N + ++ + R +
Sbjct: 4 MKVRDKDVPFMTSEWKQTIRAKRK-ATSKFLKNKTPENWENKRAARNEATRQRRIAIKHY 62
Query: 567 WHKQ 578
W KQ
Sbjct: 63 WRKQ 66
>SB_23065| Best HMM Match : PID (HMM E-Value=1)
Length = 141
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 374 ISCLPRKPFEIKEQRCTVYNSGKNRKSS--VQKGRHNPKNCHT*STSKPTKAEIST 535
++C+PR+ +E CTV N G + +S Q+ R+N + ++ + S+ K ST
Sbjct: 4 LACIPRRGRGSQEDTCTVRNLGCSTATSPGAQEMRNNMDSFYSMTRSRSRKMLKST 59
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 9.1
Identities = 29/117 (24%), Positives = 51/117 (43%)
Frame = +2
Query: 332 MDTASRRKRSTE*PISCLPRKPFEIKEQRCTVYNSGKNRKSSVQKGRHNPKNCHT*STSK 511
+D+A+ + + I L ++E C + N + +++ + N K +
Sbjct: 738 VDSATGESQEMKHKIHTLAESLKSVQESVCDLEIERDNLQLDLEESKKNEKELR--AVIV 795
Query: 512 PTKAEISTNIEALVKDGNLAQAMDVLLKSIEVGTMPKSNVVKYLLKNLAEEGNVEKI 682
K E S+ + LVK +LAQ + LK +++ K LK+ EE N EKI
Sbjct: 796 QLKRENSSTRDKLVKANDLAQTLQDCLK--------EAHDEKEDLKDSLEEANDEKI 844
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,506,114
Number of Sequences: 59808
Number of extensions: 484746
Number of successful extensions: 1771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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