Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0064
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 8e-40
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 142 2e-34
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 112 3e-25
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 98 6e-21
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 74 1e-13
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 65 7e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 64 9e-11
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 64 1e-10
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 62 4e-10
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 61 9e-10
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 58 1e-08
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 58 1e-08
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 55 6e-08
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 52 5e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 50 2e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 50 2e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 49 4e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 5e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 44 2e-04
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 35 0.065
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 35 0.065
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.5
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 3.2
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 28 7.5
SB_10588| Best HMM Match : Sec63 (HMM E-Value=0) 28 9.9
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 28 9.9
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 161 bits (390), Expect = 8e-40
Identities = 76/171 (44%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 433
FNKNFY+ HP + K+S E+++ R + VSG P F F + + ++ +
Sbjct: 477 FNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRKLE 536
Query: 434 YKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 610
Y +PT IQ Q PIA+SG++++G+ TGSGKT A++ PA+VHI +QP ++ GDGPI L+
Sbjct: 537 YTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLIC 596
Query: 611 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
APTREL QQI A FG + VFGG K EQ++ L+ G EIV+AT
Sbjct: 597 APTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVAT 647
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 142 bits (345), Expect = 2e-34
Identities = 77/156 (49%), Positives = 98/156 (62%)
Frame = +2
Query: 296 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 475
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 476 AMSGKNLVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 655
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA
Sbjct: 113 -------------------FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAY 153
Query: 656 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
G +R+TC++GGAPK Q R+LERGVEI IAT
Sbjct: 154 SVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIAT 189
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 112 bits (270), Expect = 3e-25
Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 5/136 (3%)
Frame = +2
Query: 320 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 499
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 500 GV-PTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 664
GV TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFG 202
Query: 665 HTSYVRNTCVFGGAPK 712
+R V GGA +
Sbjct: 203 RPLGIRTVSVIGGADR 218
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 98.3 bits (234), Expect = 6e-21
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +2
Query: 254 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 433
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 434 YKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 610
++ PTPIQ Q MSG++++G+ TGSGKTLAY LP + + + P GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 611 APTRELAQQI 640
PTREL QQ+
Sbjct: 152 TPTRELMQQV 161
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 93.1 bits (221), Expect = 2e-19
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +2
Query: 344 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSG 520
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ TGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 521 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 700
KT AY+LP + + Q P+AL +APTRELA+QI A F + ++ +G
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 701 GAPKREQARDLERGVEIVIAT 763
G QA LERG ++ T
Sbjct: 589 GVSVPYQASQLERGCHFLVGT 609
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 92.7 bits (220), Expect = 3e-19
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Frame = +2
Query: 335 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPT 511
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ T
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 512 GSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 679
GSGKT A++LP + + N P A+ +APTRELA QI A F H + +
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817
Query: 680 RNTCVFGGAPKREQARDLERGVEIVIAT 763
R +GG Q R L+ G +++ T
Sbjct: 818 RPVVCYGGVSVSHQLRQLQSGCNLLVGT 845
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 74.1 bits (174), Expect = 1e-13
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPA 547
++ F + G+ G+ PT IQ QG P+A+SG++++G TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 548 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQA 724
I + Q DG ALV++PTRELA Q +V G+ + + GG K EQ
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQK 167
Query: 725 RDLERGVEI 751
R ++ + +
Sbjct: 168 RIMKTNIVV 176
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 72.1 bits (169), Expect = 5e-13
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +2
Query: 413 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGD 589
QG+K MG+ T IQ + + G++L+G TGSGKTLA+++P +V + + + +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRN 643
Query: 590 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
G ++++PTREL+ Q VA D + GG ++ +A L++GV ++IAT
Sbjct: 644 GTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIAT 701
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 64.9 bits (151), Expect = 7e-11
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +2
Query: 428 MGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 604
MG K+PT IQ P + G++ +G TGSGKT A+ LP + + + P G A+
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPY-----GIFAV 79
Query: 605 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
VL PTRELA QI G ++ + GG +QA L +VIAT
Sbjct: 80 VLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIAT 132
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 64.5 bits (150), Expect = 9e-11
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +2
Query: 449 PIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTR 622
PIQA + G++++G TG+GKTL++ LP + + + + +RG P LV+APTR
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTR 157
Query: 623 ELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
ELA+Q+ + S + C++GG P Q + G+++++ T
Sbjct: 158 ELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGLDVLVGT 202
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +2
Query: 269 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 448
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 449 PIQAQGWPIAMSGKN-LVGVPTGSGKTL 529
PIQ Q P+ +SG++ +V TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 62.5 bits (145), Expect = 4e-10
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Frame = +2
Query: 335 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVP-T 511
EV + G P + F +Y + +G PT +Q WP + G+++ GV
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 512 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 679
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 680 RNTCVFGGAPKREQARDLERGVEIVIAT 763
R +FGG + ++ L G E+++AT
Sbjct: 294 RVQMIFGGGAEEDRIVPLINGCEVLVAT 321
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 62.1 bits (144), Expect = 5e-10
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Frame = +2
Query: 398 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLVGVP-TGSGKTLAYILPAIVHIN--- 562
PD + + + G+ +PTPIQ+ P A+ ++++G TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYK 197
Query: 563 ----NQPPI-------RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 709
Q P +G +AL++APTRELA Q++ + V+ + GG
Sbjct: 198 KRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMA 257
Query: 710 KREQARDLERGVEIVIAT 763
+Q R L++ EIV+AT
Sbjct: 258 APKQQRLLKQRPEIVVAT 275
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 61.3 bits (142), Expect = 9e-10
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Frame = +2
Query: 275 PHPTVLK-RSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 448
P TV K +E N T S + + F D V + + + +PT
Sbjct: 343 PEATVSKGEKEVTIEAVGQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPT 402
Query: 449 PIQAQGWPIAMSGKNLV-GVPTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVL 610
IQ P + +++ TGSGKTLAY+ P +VH + R G P A ++
Sbjct: 403 VIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIV 461
Query: 611 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
P RELA QI + A H + R+ + GG ++ DLE V++++AT
Sbjct: 462 VPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVAT 512
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 61.3 bits (142), Expect = 9e-10
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +2
Query: 479 MSGKNLVG-VPTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVA 652
+S ++++ +G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVV 179
Query: 653 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
G +V+ GG RE LE GV +V+ T
Sbjct: 180 LALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGT 216
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 58.8 bits (136), Expect = 5e-09
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 422 KTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHINNQPPIRRGDGPI 598
+T G+++P+ IQ + + G++++ +G+GKT + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 599 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV T
Sbjct: 68 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 122
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +2
Query: 521 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 700
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 701 GAPKREQARDLERGVEIVIAT 763
G EQ +L+RG EI++ T
Sbjct: 181 GTGISEQIAELKRGAEIIVCT 201
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +2
Query: 254 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 430
F K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 64 FRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKN 123
Query: 431 GYKEPTPIQAQGWPIAMSGKNLVGVPTGSGKTLA 532
Y++PTPIQAQ P+ MSG++++ + + LA
Sbjct: 124 SYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELA 157
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
FE+ + G+ G+ +P+PIQ + P+A++G++++ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 664
+ + ALVL PTRELA Q Q+ + G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 380 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVH 556
FE+ + G+ G+ +P+PIQ + P+A++G++++ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 557 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 664
+ + ALVL PTRELA Q Q+ + G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +2
Query: 413 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHINNQPPIRRGD 589
+ V +G+ PTPIQA P+A+ GK++ TG+GKT A++LP + + +P +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSP 80
Query: 590 GPIALVLAPTRELAQQ 637
LV+ PTRELA Q
Sbjct: 81 AIRVLVITPTRELAIQ 96
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 54.4 bits (125), Expect = 1e-07
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPA 547
I FE+ + + + V GYK+PTP+Q PI ++L+ TGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 548 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 727
+ I + P P AP DF + S R V+GGA Q R
Sbjct: 934 LSRIYMEGP------P-----AP------------PDFSYRSLCRPCVVYGGADIGSQLR 970
Query: 728 DLERGVEIVIAT 763
+L+R +++AT
Sbjct: 971 ELDRNCHLLVAT 982
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 52.0 bits (119), Expect = 5e-07
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Frame = +2
Query: 332 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 496
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 497 VG-VPTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HT 670
+ +G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHC 200
Query: 671 SYVR-NTCVFGGA-PKREQARD 730
+++ N V G P+ ++ D
Sbjct: 201 PHIKINYAVRGNQFPRGQKCTD 222
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 470 PIAMSGKNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 646
P+ M GK++V + TGSGKT A+++P + G AL+L+PTRELA Q Q+
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQK 369
Query: 647 VAADFGHTSYVRNTCVFGG 703
+ G + ++++ + GG
Sbjct: 370 FIKELGRFTGLKSSVILGG 388
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +2
Query: 398 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL-VGVPTGSGKTLAYILPAIVHINNQPP 574
P V++ +K MG +P PIQ + P S K+L + TG+GK+L ++LP++ Q P
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP 222
Query: 575 IRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 679
RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 223 -GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +2
Query: 335 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPT 511
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ T
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 512 GSGKT 526
GSGKT
Sbjct: 181 GSGKT 185
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 488 KNLVGVP-TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 664
K+++G+ TGSGKT A+ LP + + + P AL+L PTRELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
Query: 665 HTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
V+ + GG QA L + I+IAT
Sbjct: 57 SGIGVKCAVIVGGIDMMSQALMLAKKPHIIIAT 89
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 308 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 475
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 476 AMSGKNLVG 502
G G
Sbjct: 197 MAHGPKKSG 205
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 533 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 640
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 47.2 bits (107), Expect = 2e-05
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 413 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPTGSGKTLAYILPAIVHINNQPPIRRGD 589
+G+ G+++P+PIQ + P+ G +L+ +G+GKT + + A+ ++ I +
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV-----ITESN 80
Query: 590 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIAT 763
++L PTRE+A Q++ V G Y C VF G E+ + + I + T
Sbjct: 81 CIQIIILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGT 138
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +2
Query: 593 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 763
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV T
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 431 GYKEPTPIQAQGWPIAMSGKN-LVGVPTGSGKTLAYILPAIV 553
GY + P+Q Q ++ K+ L+ +PTG+GKT+ Y +PA++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 35.1 bits (77), Expect = 0.065
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 239 CFAPTFNKNFYDPHPTVLKRSPYEVEEYRNNHEV-TVSGVEVHNPIQYFEEANFPDYVQQ 415
C K D + LK E +E+ N + TV+ + P+ E P V +
Sbjct: 460 CRGSKAQKELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYK 515
Query: 416 GVKTMGYKEPTPIQAQGWPIAMSG-KNLVGVPTGSGKTLAYILPAIVHINNQP 571
+ +G+ Q Q +SG +LV + TG+GK+L Y LPA ++ P
Sbjct: 516 ALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 497 VGVPTGSGKTLAYILPAIV 553
V +PTGSGK+L Y LPA+V
Sbjct: 39 VSMPTGSGKSLCYQLPAVV 57
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 356 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 469
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 266 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 406
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -2
Query: 159 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 46
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 479 MSGKNLVGV-PTGSGKTLAYILPAIV 553
MSG + + + PTG GK+L + LPA+V
Sbjct: 102 MSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_10588| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 1047
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 449 PIQAQGWPIAMSGKN--LVGVPTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTR 622
P+Q Q + + + L+G PTGSGKT+ L AI + ++ P G A+ +AP +
Sbjct: 169 PVQTQVFHTVYNSDHNVLLGAPTGSGKTIIAEL-AIFRLFDKYP-----GAKAVYIAPLK 222
Query: 623 ELAQQ 637
L ++
Sbjct: 223 ALVRE 227
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/82 (26%), Positives = 33/82 (40%)
Frame = +2
Query: 395 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPTGSGKTLAYILPAIVHINNQPP 574
FP + K +P I S +G PTGSGKT+ A++ Q P
Sbjct: 1957 FPSSIPFRHKVQSLLKPISISVFSTLYDSSENVFIGAPTGSGKTICAEF-AVLRFLQQSP 2015
Query: 575 IRRGDGPIALVLAPTRELAQQI 640
R + + P + LA+Q+
Sbjct: 2016 EGR-----CVYVTPIQALAEQV 2032
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,064,151
Number of Sequences: 59808
Number of extensions: 543798
Number of successful extensions: 1481
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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