Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0057
(776 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 104 9e-23
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 75 5e-14
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 62 5e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 59 5e-09
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 58 8e-09
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 58 8e-09
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 54 1e-07
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 52 4e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 44 1e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 37 0.016
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.064
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.11
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 1.0
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 1.4
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 29 3.2
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 4.2
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 5.5
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 28 7.3
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 28 7.3
SB_20270| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.1e-35) 28 9.7
SB_54663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 104 bits (249), Expect = 9e-23
Identities = 56/139 (40%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Frame = +2
Query: 260 KLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 439
+L E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL K
Sbjct: 69 QLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNK 128
Query: 440 KTGPPAVEVTSAEQAKELIDANTLLYLVSFRTRAQPEPKLSFQXXXXXXXXXXXXSAMRK 619
KTGPPA ++ +A+ K+ I + +V F T + + +F K
Sbjct: 129 KTGPPAKDLATADAMKDFITKE--VAVVGFFTDKESDAAKAFLSAADGIDDVEFGIVSDK 186
Query: 620 -*SRSWRLKMKMLCFSRTS 673
+S +L+ LCFSR++
Sbjct: 187 LLPQSTKLRETRLCFSRSA 205
Score = 87.8 bits (208), Expect = 9e-18
Identities = 36/66 (54%), Positives = 51/66 (77%)
Frame = +3
Query: 57 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 236
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 237 PEYAKA 254
PEYAKA
Sbjct: 61 PEYAKA 66
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +3
Query: 42 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 209
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 210 WCGHCKSLAP 239
WCGHCK LAP
Sbjct: 413 WCGHCKQLAP 422
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +2
Query: 269 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK--- 436
++ + I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+
Sbjct: 432 KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGG 489
Query: 437 KKTGPPAVE 463
K PA E
Sbjct: 490 KAGNEPAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +3
Query: 108 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKA 254
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKA
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKA 103
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Frame = +2
Query: 260 KLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 439
K+ + P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK
Sbjct: 106 KMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKK 165
Query: 440 KTG-----PPAVEVT-SAEQAKELIDANTLLYLVSF 529
++ PP +T + E E+++ +L+ LV F
Sbjct: 166 QSDPNWKPPPVAALTLTKENFTEVVNRESLM-LVEF 200
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/90 (35%), Positives = 53/90 (58%)
Frame = +2
Query: 260 KLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 439
+L + + PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++
Sbjct: 221 ELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRS 280
Query: 440 KTGPPAVEVTSAEQAKELIDANTLLYLVSF 529
+ GP + ++S + ++ + + ++ F
Sbjct: 281 QVGPSSRILSSLKAVQDFMKEKDDVTIMGF 310
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = +3
Query: 117 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQ 260
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KA Q
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQ 220
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 284 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPP 454
I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK---- 630
Query: 455 AVEVTSAEQAKE 490
A S E+AK+
Sbjct: 631 ATVSLSKEKAKD 642
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 45 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 215
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 216 GHCKSLAPEYAK 251
G +L P + K
Sbjct: 556 G--IALEPTFKK 565
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 75.4 bits (177), Expect = 5e-14
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 LAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLK 436
L + + P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++K
Sbjct: 584 LKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMK 643
Query: 437 KKTGPPAVEVTSAEQAKELID 499
K+ GP +VE+ S + ++ +D
Sbjct: 644 KQAGPSSVEIKSVDHLEKKLD 664
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 129 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQS 263
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY A ++
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEA 583
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 132 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEY 245
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKY 902
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 335 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 448
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 62.1 bits (144), Expect = 5e-10
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 120 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQSW 266
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y + +++
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLGEAY 68
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +2
Query: 272 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKT 445
+ S + +AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KT
Sbjct: 70 QSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKT 129
Query: 446 G 448
G
Sbjct: 130 G 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 58.8 bits (136), Expect = 5e-09
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 96 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 245
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDY 173
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 117 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKA 254
P VL L+ NF I EY+LV+FYAPWC C+ L+P + A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTA 93
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/45 (55%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKA 254
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKA
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKA 122
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Frame = +2
Query: 269 EEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWL 433
E + +K+ +DAT A Y V+GYPT+K F G S DY GGR A DII +
Sbjct: 125 ELKGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYA 184
Query: 434 KKKTG-----PPAVEVTSAEQAKE 490
K P ++ S E KE
Sbjct: 185 LDKAADSIEPPEVIQAISNEVLKE 208
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 317 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 424
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 129 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQS 263
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY A ++
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEA 58
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 123 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQSW 266
E++ LV L ++F + TE++LV FYAPWCGHCK+ P+Y KA +++
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETF 193
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 93 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQ 260
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KA Q
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQ 94
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 293 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 451
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +2
Query: 263 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 433
L +E++ LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 96 LHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 108 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQS 263
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY A Q+
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQT 127
Score = 51.6 bits (118), Expect = 7e-07
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +3
Query: 111 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKA 254
E+P+E V LS F++ + +++LV FYAPWCGHCK PE A
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSA 237
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 284 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTGPP 454
I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + GPP
Sbjct: 268 IAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREGPP 321
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 263 LAEEESPIKLAKVDATQEQDLAESYGVRGYPT 358
L E+E P LA VDAT+E L + + V GYPT
Sbjct: 128 LKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 186 ILVEFYAPWCGHCKSLAPEYAKA 254
+++ Y CG+CK PE+A A
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAA 24
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 123 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKA 254
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KA
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKA 64
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 141 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPE 242
L+ NF+ +I + +LV+FYAPWC HC+ L P+
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQ 58
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +2
Query: 266 AEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 439
++E+ + +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 13 SKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 120 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAQQSW 266
+E V +L+K F+ I + V+FYAPWC HC LAP + + + +
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLAEDF 135
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 341 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 433
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 96 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAQQSW 266
+AL + NV L +F + +T+ + V+F+APWC C L PEY KA +S+
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSF 331
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 138 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 245
V SK F V+ + + +V+FYAPWCG C AP+Y
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 281 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 436
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 147 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAK 251
+A F +VI T+ ++++FYA WCG C+ + P++ K
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKK 54
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 129 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAPEYAKAQQSW 266
NV VL + F +T T+ ++ +F A WCG CKS+AP Y+ + +
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKY 56
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 263 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKK 442
L+E+ K+D Q+LA GV PT +FF+N +D G + +KK
Sbjct: 52 LSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKW 111
Query: 443 TG 448
G
Sbjct: 112 IG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 257 TKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 391
T L+ + + KVD Q Q AES G+R PT F+ N + ID
Sbjct: 51 TNLSMKFMDVVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 129 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAPEY 245
NV+V+ +F +V + ++++F A WCG CKS+AP +
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVF 50
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 159 ETVITTTEYILVEFYAPWCGHCKSLAP 239
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 335 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 448
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 263 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 391
+AE++ + LAKVD +LA ++GV PT+ + G I+
Sbjct: 17 IAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVIN 59
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 263 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 394
+AE++ + LAKVD +LA ++GV PT+ + G +++
Sbjct: 63 IAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVMEH 106
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.1 bits (67), Expect = 1.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 156 FETVITTTEYILVEFYAPWCGHCKSLAPEY 245
F+ + E ++F A WCG C+ + P++
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKF 33
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.7 bits (66), Expect = 1.4
Identities = 8/36 (22%), Positives = 21/36 (58%)
Frame = +3
Query: 126 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSL 233
+ ++ + N + + ++++ + FYAPW HC+ +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +2
Query: 284 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 463
+ +A V+ +E +LA+ GV+ + F G ++Y G + + + + PP
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTN 162
Query: 464 VTSAEQAKELIDA 502
+ + +Q L DA
Sbjct: 163 IDNKKQRTLLEDA 175
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 129 NVLVLSKANFETVITTTEYILVEFYA 206
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 341 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 433
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.1 bits (62), Expect = 4.2
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +3
Query: 210 WCGHCKSLAPEYAKAQQ 260
WCG CK+L P++A++++
Sbjct: 8 WCGACKALRPKFAESKE 24
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 616 KVIKELEAEDEDVVLFKNFEEKRVKYEDEE 705
+V KELEAE E L K EE+R++ E+EE
Sbjct: 1423 EVQKELEAEMEMERLQKENEEERLRKEEEE 1452
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 287 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 388
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 604 VSDEKVIKELEAEDEDVVLFKNFEEKRVKYEDEEITEDLLN 726
+SDE++ K + DE+ L K+ E+ +KY ++LLN
Sbjct: 437 LSDEEITKAILTIDEEEELSKDMVEQLLKYVPTAAEKNLLN 477
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/29 (31%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 153 NFETVITTTEYIL--VEFYAPWCGHCKSL 233
+F+ +++++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_20270| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.1e-35)
Length = 724
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 514 VFGFFSDQSSARAKTFLSTAQVVDDQVFA--IVSDEKVIKELEAEDEDVVLFKNFEEKRV 687
+ G D + K S VV++ A IV + + + + + F+N EK
Sbjct: 156 ILGVPHDNQMSDRKNIDSNKSVVENDSVANGIVPKSENLPQGSSNEHSPEQFENHNEKTS 215
Query: 688 KYEDEEITEDLLNAWVFVQSMPTIVNS 768
++ E E+ LN + V+ PT+ S
Sbjct: 216 QFLSESEKENSLNIELTVEGKPTLRKS 242
>SB_54663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 457 C*GHLC*TG*RTYRCQYFIVFGFFSDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIKELE 636
C H C RT Y FF+ +S+ +AK +V +F + S +
Sbjct: 12 CENHYCDHSKRTMEHSYTQSSCFFTPESAEKAKDMKDFGRVT--PIFGLTSSVFLSPPSS 69
Query: 637 AEDEDVVLFKNFEE-KRVKYEDEEITED 717
+E V FKN ++ R+ + EE ++
Sbjct: 70 SERSPVPNFKNLDDVPRLDLQTEESDQE 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,805,421
Number of Sequences: 59808
Number of extensions: 427494
Number of successful extensions: 1210
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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