Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0052
         (786 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   6e-04
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)                 40   0.002
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.016
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.016
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.021
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)                36   0.037
SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)           34   0.15 
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)                33   0.26 
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)               33   0.35 
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)              32   0.46 
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)                 32   0.46 
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)                 29   5.6  
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)          28   7.5  
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17)           28   9.9  
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)                  28   9.9  
SB_5548| Best HMM Match : PT (HMM E-Value=3.1)                         28   9.9  

>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/59 (32%), Positives = 37/59 (62%)
 Frame = +3

Query: 501 SLGTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 677
           +L  +K + + +  +H+   K+ D    A++T +IE  F+++Q + I+ LAGH ++LKR
Sbjct: 286 ALDLEKHVNQALLDLHKIAEKHGD----AQMTDFIEGNFLTEQVEAIKELAGHLTNLKR 340



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +1

Query: 286 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKM 414
           A++F     +  GFA  F+K +++ +      ++ + KRGG++
Sbjct: 1   AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRV 43


>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
          Length = 88

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 19/67 (28%), Positives = 40/67 (59%)
 Frame = +3

Query: 501 SLGTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKRF 680
           +L  +K++   +  +HR+  + +D    A++  +IEE F+++Q D+I+ L+ + S L+R 
Sbjct: 17  ALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLSNYVSTLRRL 72

Query: 681 ITENNGK 701
             E  G+
Sbjct: 73  GGEGLGE 79


>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 14/42 (33%), Positives = 31/42 (73%)
 Frame = +3

Query: 552 EVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 677
           E+ K ++   DA+++ +IE+ F+++Q ++IR L+G+ + LK+
Sbjct: 94  ELEKTAEKNGDAQMSDFIEDHFLTEQVESIRELSGYIAVLKK 135


>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 289

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 15/59 (25%), Positives = 36/59 (61%)
 Frame = +3

Query: 501 SLGTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 677
           +L  +K + + +  +H+   K+ D    +++  ++E  ++++Q + I+ LAGH ++LKR
Sbjct: 218 ALDLEKHVNQALLDLHKVAEKHGD----SQMQDWLESHYLTEQVEAIKELAGHLTNLKR 272


>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 15/59 (25%), Positives = 36/59 (61%)
 Frame = +3

Query: 501 SLGTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 677
           +L  +K + + +  +H+   K+ D    +++  ++E  ++++Q + I+ LAGH ++LKR
Sbjct: 233 ALDLEKHVNQALHDLHKVAEKHGD----SQMQDWLESHYLTEQVEAIKELAGHMTNLKR 287


>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
          Length = 155

 Score = 35.9 bits (79), Expect = 0.037
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +2

Query: 56  IASNMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 217
           ++S+MK   L++AC ++    E+D C +  D GC   + L  CS YY Q  D H
Sbjct: 46  MSSDMKSLVLLIACFSVARATEDDFCKER-DAGC--YVDLKDCSKYY-QCDDFH 95


>SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)
          Length = 117

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 76  VCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLR 198
           V SH  LSG GC G+GR +  E++ R      +A LQ +LR
Sbjct: 56  VWSHLHLSGGGC-GKGRHLPKEKQSRGSPPISAALLQHILR 95


>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
          Length = 339

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 68  MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 217
           MK   L++AC ++    E+D C +  D GC   + L  CS YY Q  D H
Sbjct: 1   MKSLVLLIACFSVARATEDDYCKER-DAGC--YVDLKDCSKYY-QCDDFH 46


>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
          Length = 126

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 268 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 366
           Y YL  A +F+    N  GF K F+K S + WE
Sbjct: 50  YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82


>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
          Length = 3397

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
 Frame = +3

Query: 549 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDLKRFITENNG 698
           +EVT N+  L D  +TQ  E        EE+V +    IR +   T  +KR+IT++NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238


>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
          Length = 360

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +1

Query: 541 SSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*PRTTGKTCL 711
           +S  +SLKT+  +++  S  T R+ S  + P R      +P+TSS S P+T+ KT L
Sbjct: 120 TSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKR------SPKTSSKSSPKTSPKTSL 170



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +1

Query: 529 RGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*PRTTGKTC 708
           R   +S   SLKT+  +   +S NTS + S   K     + + +P+TS  +  +T+ KT 
Sbjct: 124 RSLKTSPKTSLKTSRKTDRKKSRNTSPKRS--PKTSSKSSPKTSPKTSLKTSSKTSPKTS 181

Query: 709 LS 714
           L+
Sbjct: 182 LN 183


>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
          Length = 521

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +1

Query: 556 SLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*PRTTGKTCLS 714
           S KT+  +  ++SL TS + S    P      R +P+TSS + P+T+ KT L+
Sbjct: 349 SPKTSPKTMRMKSLKTSPKTSPEISP------RTSPKTSSKTSPKTSLKTSLN 395


>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
          Length = 237

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 352 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 447
           +DS ++ +G +K V K GG+  F  H   K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191


>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1008

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 244 SLTVLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 357
           S  +L    HYL S + F NYQ   +G   LF++  D+
Sbjct: 326 STILLNAGLHYLESTN-FTNYQRLIDGIVLLFKRAKDE 362


>SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17)
          Length = 280

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 67  YEGVCSHRCLSGSGCAGRGRLML 135
           +EGVC+H  +   G  G GR+ML
Sbjct: 63  HEGVCNHLSMMAPGKHGTGRVML 85


>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
          Length = 240

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +1

Query: 556 SLKTATSSTMLRSLNTSRRNS*VSKPIRF--VASRVTPRTSSGS*PRTTGKT 705
           S KT+  +  ++SL TS + S    P      +S+ +P+TS  S P+T+ KT
Sbjct: 101 SPKTSPKTMRMKSLKTSPKTSPEIGPRTSPKTSSKTSPKTSPKSSPKTSPKT 152


>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
          Length = 157

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +1

Query: 541 SSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*PRTTGKT 705
           +S   S KT+  +  ++SL T+ + S   K  R    + +P+TS  + P+T+ KT
Sbjct: 5   TSPKTSPKTSQKTMRIKSLKTTPKTS--PKTRRKTGRKTSPKTSPKTSPKTSPKT 57


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,106,986
Number of Sequences: 59808
Number of extensions: 432155
Number of successful extensions: 1122
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)