Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0017
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 79 5e-15
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 70 3e-12
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 62 4e-10
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 51 9e-07
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 49 4e-06
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 46 4e-05
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 41 0.001
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 39 0.004
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 36 0.029
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 36 0.038
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 36 0.050
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 31 1.4
SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18) 30 2.5
SB_33052| Best HMM Match : Ribosomal_S3_C (HMM E-Value=4.2) 29 3.3
SB_35716| Best HMM Match : PC4 (HMM E-Value=1.1e-12) 29 3.3
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 29 4.4
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 5.8
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Frame = +2
Query: 209 FCREAYEESRWFIEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFH 388
F E +ES F W+ AI G GT + GG +K M F DYP SPP +F ++H
Sbjct: 1144 FTVEVPDESNTF----EWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWH 1199
Query: 389 PNVYPSGTVCLSLLDEEKD-----------WRPAITIKQILLGIQDLLNEP 508
PN+Y SG VC+S+L D W P ++ ILL + LLNEP
Sbjct: 1200 PNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEP 1250
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDE- 436
WE + G GT +E G +K M+F +YP PP F ++HPNV+ +G VC+S+L E
Sbjct: 365 WEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISILHEP 424
Query: 437 ----------EKDWRPAITIKQILLGIQDLLNEP 508
++ WRP T++ I+L + +L EP
Sbjct: 425 GEDKYGYEKADERWRPIHTVETIMLSVISMLAEP 458
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWR 451
G +GTP+ G++KL + + YP PPK +F P++HPN+ SG +CL L + W+
Sbjct: 4 GAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWK 63
Query: 452 PAITIKQILLGIQDLLNEP 508
PA+ I +L I L+ EP
Sbjct: 64 PALNISSVLSTILILMAEP 82
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 62.5 bits (145), Expect = 4e-10
Identities = 23/72 (31%), Positives = 44/72 (61%)
Frame = +2
Query: 293 PWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQ 472
P+ G +++ + F +YP PPK F+ ++HPN+ G VCL ++ E +W+PA +Q
Sbjct: 36 PYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPE-NWKPATKTEQ 94
Query: 473 ILLGIQDLLNEP 508
++ + L+++P
Sbjct: 95 VIQALLALVHDP 106
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 344 PSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWRPAITIKQILLGIQDLLNEP 508
P PPK +F P++HPN+ SG +CL L + W+PA+ I +L I L+ EP
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEP 96
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W I G G+ +EGG++ L + F DYP PPK G VCL +L +
Sbjct: 127 WYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK---------------GMVCLDILKD- 170
Query: 440 KDWRPAITIKQILLGIQDLLNE 505
W PA+TI ++LL I LL +
Sbjct: 171 -SWSPALTISKVLLSICSLLTD 191
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 368 FEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 508
F +FHPNV +G +C++ L +KDW+P + IKQ+LL ++ LL P
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL--KKDWKPDLGIKQVLLTVKCLLIVP 191
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 46.0 bits (104), Expect = 4e-05
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQ 472
+ GG +K + +DYP++PP + ++HPN+ G+VCLSLLD DW + ++
Sbjct: 50 YRGGQFKFS-VKTEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLD---DWNESNDLED 105
Query: 473 ILLGIQDLLNEP 508
++ G+ L P
Sbjct: 106 LVQGLLFLFYNP 117
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLDE 436
I G TP+EGG + + DYP PP+ K F+PN+Y +G VCLS++ +
Sbjct: 17 ITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSIIGD 76
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 296 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQI 475
+ GG +K + DYP+ P + ++HPN+ VC+SLLD DW+ + ++ +
Sbjct: 50 YRGGQFKFS-VRTTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLLD---DWQASNDLEDL 105
Query: 476 LLGIQDLLNEP 508
+ G+ L P
Sbjct: 106 VQGLLFLFYNP 116
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL-LDE 436
W + G T + GG Y R+I +YP PP P + +CLS+
Sbjct: 41 WHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTP--NGRFEIGKKICLSMSAHH 98
Query: 437 EKDWRPAITIKQILLGI 487
+ W+P+ +I+ +L+ I
Sbjct: 99 PETWQPSWSIRTVLMAI 115
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL---FHPNVYPSGTVCLS 424
I G GTP++ GL+ ++ +YP +PP + +PN+Y G VC++
Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 36.3 bits (80), Expect = 0.029
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 361
W I G G+ +EGG++ L + F DYP PPK
Sbjct: 167 WYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 361
W I G G+ +EGG++ L + F DYP PPK
Sbjct: 54 WYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPK 87
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 361
I G TP+EGG Y L ++ + YP +PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -3
Query: 255 INSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFSTKITRFMSRAS 103
+ + L S S++N+ D P L++ LN HL ++ ++T+FM + +
Sbjct: 2866 LTGSSRLRSPSGSKRNKEDSPNVPLTLSDLNNHLNTINLQVEVTKFMHKCA 2916
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPP 358
G GTP+EGG++K+R+ + YP P
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSP 82
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 317 LRMIFKDDYPSSPPKCKFEPPLFHPN-VYPSGTVCLSLLDEEKDWRPAITIKQILLGIQD 493
L + F +++P +PP + P V G +C+ LL K W A T++ ++L
Sbjct: 793 LNITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELL-TPKGWSSAYTVEAVVLQFSA 851
Query: 494 LLNEPT*KIQRKLK 535
+ + +I R K
Sbjct: 852 AVVKGKGRIDRTCK 865
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPP 358
W + G T + GG Y R+I +YP PP
Sbjct: 6 WHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPP 38
>SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18)
Length = 484
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 356 PKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 499
P C P +PNV + TVC+ L E DW ++ + L I +L
Sbjct: 165 PNCTMCPIKQYPNV--NRTVCIDLPLENLDWTSLVSASMLALAITAML 210
>SB_33052| Best HMM Match : Ribosomal_S3_C (HMM E-Value=4.2)
Length = 260
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 664 RQWLSSLTLHCPILIFTQQQPL 599
R+WL S+TL+CP+L T + L
Sbjct: 178 REWLHSITLNCPLLNLTASKNL 199
>SB_35716| Best HMM Match : PC4 (HMM E-Value=1.1e-12)
Length = 501
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 144 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNL*LGNVRYLVKRGLHGKV 305
S ++ L E +K +K+ P + K DGS L N R + R GKV
Sbjct: 426 SYVSDVMLPESKKKQKKEKPEASSSSGTKQDDGSYVFPLANKRQVTVRDFRGKV 479
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 398 YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPT*KIQRKLKPT 541
+P V LS+ D+E+ WR ++ +K + + + + N P + R L PT
Sbjct: 516 FPDAKVILSVRDDEESWRRSL-LKTVGV-VSSMTNNPLLIVCRTLTPT 561
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 338 DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAI 460
D + P C F +F +P V LS+ D+E+ WR ++
Sbjct: 60 DATTDAPACFFYKEIFR--AFPYAKVILSVRDDEESWRRSL 98
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 282 KRGLHGKVGCI-NYV*SSKMIIHQVLQNA 365
K+ LHGKVGCI + + S+ ++IH + A
Sbjct: 350 KQNLHGKVGCILSIIGSTVLVIHAPQEEA 378
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,269,736
Number of Sequences: 59808
Number of extensions: 531569
Number of successful extensions: 1144
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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