Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10c06
(545 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 31 0.81
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 30 1.4
SB_34783| Best HMM Match : Gam (HMM E-Value=0.24) 29 2.5
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 3.3
SB_17720| Best HMM Match : Atracotoxin (HMM E-Value=3.2) 29 3.3
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 29 3.3
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07) 28 5.7
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_53694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 27 7.6
SB_18848| Best HMM Match : WD40 (HMM E-Value=5.5e-07) 27 7.6
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 33.5 bits (73), Expect = 0.12
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = +3
Query: 216 SNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMG 395
S G KKP + KKK G Y D E S E E+V K+ ++ S G G
Sbjct: 428 SKGAKKGTKKPRVPKKKEGEEGYDPYDFE-----SDEEETEEVVDKIKKRRSSRASAGDG 482
Query: 396 RSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKS 524
TE +D S+ + +++E + + LQ++ TK+
Sbjct: 483 TDDATESMD---TSDATQDTTATISEERLNKFKSSLQQVFTKA 522
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 31.9 bits (69), Expect = 0.35
Identities = 34/148 (22%), Positives = 63/148 (42%)
Frame = +3
Query: 99 LDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYH 278
L T +T +S+ T R+ E L +++ R + I +KK+
Sbjct: 727 LKTGRTNKAQYSEATNIYREPYLIQEKTQRLKYAIEEKAKKERERMEQLEIQRQKKVEEQ 786
Query: 279 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS 458
+ ++EKR+ R E+ + +L +++ L ST TE EED K+
Sbjct: 787 KKKREEKEKRVAELRA---ERQR-ELMEKKKQLLEKDKLISTLTEKAKKKKEREEDAKRR 842
Query: 459 LKMAKEAIANLERDLQKMDTKSSPKSAQ 542
L++ K+A + R Q+ +T+ + Q
Sbjct: 843 LRLQKKADLDARRK-QEEETRKQRQLEQ 869
>SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +3
Query: 336 EKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQS-----LKMAKEAIANLERD 500
EK K K ++AA+ ++G GR+++ + D+H++ + + + + + E I+ + +
Sbjct: 232 EKEKEKAEKKKAAVAASGRGRASSAGEEDEHIIEQGALSPNAVGSIVGLQSEEISQMASE 291
Query: 501 LQKMDTKSSPKSA 539
+ D KSS S+
Sbjct: 292 YAERDFKSSALSS 304
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 30.7 bits (66), Expect = 0.81
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 345 KVKLCDEEAALTSTGMGRSTTTEDIDDHL------MSEEDMKQSLKMAKEAIANLERDLQ 506
KV+L E AL T E ++ L M++E+ + LKMA+E I NL+++L
Sbjct: 27 KVELLASEKALKEEIDSIKTRVEGLEQELEKHKGAMADEEAIRRLKMAEETIENLQKNLA 86
Query: 507 KMDTKSSPKSAQM 545
+ + A+M
Sbjct: 87 ATKQEEAALLAEM 99
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = +3
Query: 267 IGYHLYRDSDEEKRLTSSRENCNEKVKVKLC--DEEAALTSTGMGRSTTTEDIDDHLMSE 440
+G + +DSDEEKR + EN V+ K D+E A + D + +
Sbjct: 151 MGSSVAKDSDEEKRKSDDDENKEGGVRSKRVDQDQEKAKEEGKAEKEAERNDSSEDENKD 210
Query: 441 EDMK--QSLKMAKEAIANLERDLQKMDTKSSPKSAQM 545
D K Q+ ++ +E + + +L + T+++ ++ ++
Sbjct: 211 SDAKAAQTKEVEEEEVRSNRGNLDEQSTEANAQTKEV 247
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +3
Query: 297 EEKRLTSSRENCNEKVKVK---LCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 467
E K L + R N ++ K L E L + R +ID+ ++ MK+ L
Sbjct: 1038 EIKELKAQRNNLETELSNKSHKLAITEGQLANARKDRDNLKAEIDNLNITIRKMKEDLLA 1097
Query: 468 AKEAIANLERDLQKMDTKSSPKSA 539
A+ ++ ER+++ D + K A
Sbjct: 1098 AQSSLKQKEREVETKDKELKDKDA 1121
>SB_34783| Best HMM Match : Gam (HMM E-Value=0.24)
Length = 347
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/66 (21%), Positives = 30/66 (45%)
Frame = +3
Query: 336 EKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMD 515
+K +L +E+ ++ ++ +DH+ ++M + LK E +A + + D
Sbjct: 15 QKANARLEEEKTSIEEHAHYLQQLLQEKEDHIAHAQEMNKILKQRVEKLAQKQNPKKNKD 74
Query: 516 TKSSPK 533
TK K
Sbjct: 75 TKELEK 80
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 KKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE 440
+ +G L E + L S E+ N+KV+ +CD L S E + L +
Sbjct: 716 RNLGSELKALKKENEELVSQVESLNQKVEQVVCDNSKEL-------SDLKEKFERELQEK 768
Query: 441 E-DMKQSLKMAKEAIANLERDLQKMD 515
++++ ++ E IA LER ++ +
Sbjct: 769 RTTIRETKDISNEEIATLERKFEERE 794
>SB_17720| Best HMM Match : Atracotoxin (HMM E-Value=3.2)
Length = 389
Score = 28.7 bits (61), Expect = 3.3
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +3
Query: 213 ISNGRSLHAKKPIIVKKKIGYH--LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTST 386
IS+G+ L A+ + K+ H L +DS+E + NC K E+
Sbjct: 133 ISSGKVLDAEALTLNCKQCQVHGNLEKDSEEYALWRADHNNCKSNYKGSSPSMESEGMER 192
Query: 387 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLER 497
RS T+ + + +S K KE I ++E+
Sbjct: 193 MFSRSQDTQKFRYSELYGDGNSKSFKQKKECIDHVEK 229
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 315 SSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANL- 491
+S+E E V + + A GMGR +++DD L + +K +L + E +L
Sbjct: 1547 ASKEEVPEAVAAESLETLEAAPGDGMGRLDIEDELDDALNVYQQLKTALDASNEDNVSLR 1606
Query: 492 ERD 500
ER+
Sbjct: 1607 ERE 1609
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 373 AASSSHNLTFTFSLQFSRELVNLFSSSESRYK*YPIFFLTIIG--FLACKLLPFDMPSST 200
AA+ S ++ +L +L+N R++ +P+ I F+ C+++P D PS
Sbjct: 513 AAAKSKGVSLNDNLLIGPDLLNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLR 572
Query: 199 F 197
F
Sbjct: 573 F 573
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 90 GEHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNG 224
G+H+D TL + D T + + + ++D N+N DG+ G
Sbjct: 1074 GKHIDRIITLQNEILDATNPKLREALKKKIDKIKNENDLDGMELG 1118
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +3
Query: 294 DEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAK 473
D+E + + + +K ++ D+E M + E++D M +ED ++ K K
Sbjct: 19 DKENKEDKEKMDKEDKEEMDKQDKENKEDKEEMDKEDK-EEMDQEEMDKEDKEEMDKEDK 77
Query: 474 EAIANLERDLQKMDTKSSPK 533
E + E D ++MD + K
Sbjct: 78 EEMDQEEMDKEEMDQEEMDK 97
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 405 TTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 503
T E+++D L +ED + LK ++ + +++RDL
Sbjct: 1445 TMEELEDELQVKEDGLRQLKKYQQQLKDIQRDL 1477
>SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07)
Length = 349
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Frame = +3
Query: 249 IIVKK-KIGYHLYRDSDEEKRLTSSRENCNEKVKV------KLCDEE--------AALTS 383
+++KK K Y+ +++D++KRL ++ E++ KL +EE A L
Sbjct: 149 VLIKKFKDDYYSVKNADKKKRLEEEQKARKEEIAAQVKSEEKLAEEEEEFKYEKGAVLHF 208
Query: 384 TGMGRSTTTEDIDDHLMSEEDM 449
T +G T+ ED+ + ED+
Sbjct: 209 TDVGEQTSREDLKELFGEHEDI 230
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 27.9 bits (59), Expect = 5.7
Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Frame = +3
Query: 111 KTLNGDFSDTTVR--ERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVK-----KKI 269
KTL D DT+ R E K ELD LN++VD+ +SL K + + K+
Sbjct: 948 KTLE-DLLDTSKRVVEEKEQKVTELDKLLNESVDELQQKDKSLKEKDGKLAELDQALKES 1006
Query: 270 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDM 449
+ + ++ SS ++ K E L + S +I + +
Sbjct: 1007 RKEIKNREAQVSQMDSSMREQKTEIYQKTMALEQNLNQSRHELSERAVEIAELKAKYDQS 1066
Query: 450 KQSLKMAKEAIANLERDLQKMDTKSSPKSAQM 545
+ L+ K +A+ E+ ++ + AQ+
Sbjct: 1067 QDQLRQTKNRLAHYEKVARQQQEDLKKRIAQL 1098
>SB_53694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 900
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 255 VKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTT 407
V + I L D+D+EKRL S + +K K KL L T S T
Sbjct: 17 VNEYISDDLASDTDDEKRLYRSEKRAEKKQKDKLHQRREKLLRTRPQSSAT 67
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 300 EKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEA 479
EKR+T+ + +K + ++ + L G ++DI+ HL+ +D + + A +A
Sbjct: 1768 EKRITTLQGQAQDKDE-EIAQLKRKLNEYSDGLGQGSKDIETHLIEIKDKSEIYRKADKA 1826
Query: 480 IANLERDLQKMDT 518
A + DL+ T
Sbjct: 1827 KALVIEDLRAEKT 1839
>SB_18848| Best HMM Match : WD40 (HMM E-Value=5.5e-07)
Length = 508
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 102 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAK 242
D + L ++D R+R T Q+ DHH +VD ++NG L K
Sbjct: 228 DAWSILGHKYNDD-FRQRMQTRQSRRDHH--GHVDRALTNGAGLGNK 271
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 27.5 bits (58), Expect = 7.6
Identities = 27/142 (19%), Positives = 56/142 (39%)
Frame = +3
Query: 108 FKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYR 287
F+ N + + + ++AELD ++ V++ + K + +++ L
Sbjct: 1951 FQLYNMRPTQSPTEGESANSEAELDFGISSLVEENAK--LKVELKDINVENEELQSQLEL 2008
Query: 288 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 467
+E R+ + E + + S G+ T ED+ EED+ L
Sbjct: 2009 TKEELTRVEALLETYRKSSSITSSTPSILQKSPGI---TVEEDMSQVKHMEEDLGNFLFY 2065
Query: 468 AKEAIANLERDLQKMDTKSSPK 533
+E +A +ER+ +D S +
Sbjct: 2066 VQEELAKIERNQTAIDENSQQR 2087
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,921,596
Number of Sequences: 59808
Number of extensions: 238565
Number of successful extensions: 884
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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