Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b20
         (366 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_57330| Best HMM Match : No HMM Matches (HMM E-Value=.)              69   1e-12
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                  69   1e-12
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)            29   1.2  
SB_55446| Best HMM Match : Sec7 (HMM E-Value=8.1)                      28   2.7  
SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.2  

>SB_57330| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 55

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 28/53 (52%), Positives = 42/53 (79%)
 Frame = +2

Query: 158 LLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           LLN++G++L+YSG  DK+A  TAAIAS++WSAYEK+GR  F  + + ++ +DC
Sbjct: 2   LLNNEGSILSYSGNGDKEANKTAAIASSIWSAYEKNGRIAFHNEEIKMLFMDC 54


>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 28/53 (52%), Positives = 42/53 (79%)
 Frame = +2

Query: 158 LLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHGRNVFKEDGLHLILVDC 316
           LLN++G++L+YSG  DK+A  TAAIAS++WSAYEK+GR  F  + + ++ +DC
Sbjct: 2   LLNNEGSILSYSGNGDKEANKTAAIASSIWSAYEKNGRIAFHNEEIKMLFMDC 54


>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
          Length = 291

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = +2

Query: 113 EVLSQANTGGVENTLLLNHQGALLAYSGYNDKDARVTAAIASNVWSAYEKHGRNVFKEDG 292
           EVLS A+T  +E +  L H+       GY   D+ V + I    W         + K D 
Sbjct: 67  EVLSDADTATIEKSSFLPHRTTRFIVHGYAGLDS-VDSIIDLKGWWGIRMKDELLRKSDD 125

Query: 293 LHLILVDCLNG 325
            ++I+VD + G
Sbjct: 126 -NVIIVDWIRG 135


>SB_55446| Best HMM Match : Sec7 (HMM E-Value=8.1)
          Length = 344

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 137 GGVENTLLLNHQGALLAYSGYNDKDAR 217
           G  E+ LL +HQ  + A  GY D D++
Sbjct: 144 GRAEDRLLFDHQSRVAALLGYEDSDSK 170


>SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2992

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 170 QGALLAYS-GYNDKDARVTAAIASNVWSAYEKHGRNVFKEDGLHLILVDCLNGK 328
           +G L  YS GY  K+  +   +A N    + +HGR   +ED +  ++ + +NGK
Sbjct: 311 KGRLNVYSSGYQGKETLLWR-LAGNHGDEW-RHGRVAVQEDIIFKVVFEAINGK 362


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,134,956
Number of Sequences: 59808
Number of extensions: 134153
Number of successful extensions: 313
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 582596255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)