Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c06
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42723| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 2e-59
SB_4487| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_13494| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 29 2.9
SB_33215| Best HMM Match : HECT (HMM E-Value=0) 29 3.9
SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.9
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_12098| Best HMM Match : p450 (HMM E-Value=1.7e-06) 29 3.9
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 29 5.1
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 5.1
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 28 6.7
SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_29236| Best HMM Match : TMS_TDE (HMM E-Value=0) 28 8.9
SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 28 8.9
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 28 8.9
>SB_42723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 226 bits (552), Expect = 2e-59
Identities = 107/173 (61%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Frame = +2
Query: 56 PQNEYIERHQKLYGRRLDYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQM 235
PQNE+IE+ +K +G RLD+ L G+KAK++NK+R EK+QM
Sbjct: 63 PQNEHIEQSRKRHGYRLDHFERKRKKEGRQPHEQAERAKKLHGLKAKLYNKKRHAEKVQM 122
Query: 236 KKKIKAHEEKNVK-HNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPI 412
KK +K HEEK K N EKV EGA+P YLLDR+ QSRAKVLSNM+KQKRKEKAGKWDVP+
Sbjct: 123 KKTMKLHEEKKTKARNNEKVPEGAVPAYLLDREGQSRAKVLSNMVKQKRKEKAGKWDVPL 182
Query: 413 PKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPM 571
PKVRA + EVFKV+K+GK++RK WKRMVTK FVG+ FTRKPPK+ERFIRPM
Sbjct: 183 PKVRAVGEDEVFKVIKTGKTRRKGWKRMVTKACFVGDGFTRKPPKYERFIRPM 235
>SB_4487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/98 (32%), Positives = 52/98 (53%)
Frame = +2
Query: 218 NEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGK 397
NEKI KK + A EK + + + + G RD+ SRAKVL++ K+K+K+K GK
Sbjct: 25 NEKIS-KKSVLA--EKKMLKDEQGIPRGM-------RDLISRAKVLAS--KKKKKKKEGK 72
Query: 398 WDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVT 511
+ I + + F+ K G+ KR+ + R+ + T
Sbjct: 73 QALTIEQKKKAVLKSKFQ-RKVGEGKREFFNRIDHEAT 109
>SB_13494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 386 KAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKR 493
KAGK D I V+A D E+ V+K+GK KR +W R
Sbjct: 203 KAGK-DQDITVVKAGKDQEII-VVKAGKIKRSSWSR 236
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 176 LRGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVL 355
LR K K+ N RR +KIQM+ + +EK N + +G + RD++ ++L
Sbjct: 878 LRREKKKMKNW-RRTQKIQMRDDLFKLQEKLKSENVQAARQGYREILGTKRDLKLEKRLL 936
Query: 356 SNMIKQKRKEK 388
K +K K
Sbjct: 937 REQKKDLKKLK 947
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +2
Query: 347 KVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGEN 526
+VLS I+ K+ P PK A + LK +SK + + + KV +GE+
Sbjct: 811 RVLSGNIELKKTPYYAITKYPQPKNIAMKRKDNNNTLKKNRSKASSHQGRIVKVVIIGED 870
Query: 527 FTRKPPKFERFI 562
K RF+
Sbjct: 871 GVGKSALTVRFL 882
>SB_33215| Best HMM Match : HECT (HMM E-Value=0)
Length = 1128
Score = 29.1 bits (62), Expect = 3.9
Identities = 31/161 (19%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Frame = +2
Query: 254 HEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIK------QKRKEKAGKWDVPIP 415
H E +V TE++ G + + ++ ++ ++ + + + ++G +DV
Sbjct: 929 HFETSVGGTTEELVPGGSHLPVSPENIYQYVRLYASKVMIGCVEAELQSMRSGLYDVIPS 988
Query: 416 KVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKKAH 595
++ E F++L SG + ++ + +TF N K ERF R +K
Sbjct: 989 ELLTSLSPEDFQLLVSGGTTDIDMNKLRSVITFTNSNGCSK-DILERFKRWFWSIVQKMT 1047
Query: 596 VTHPELKATFC-----LPIIGVKKNPSSQMYTSLGVITKGT 703
+ FC LP++ +++P ++ ++ VI+ T
Sbjct: 1048 PLQRQQLLYFCTGSAVLPVMSDRRDPDQELNITVDVISGNT 1088
>SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1846
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 678 LVYICELGFFLTPIIGKQKVAFSSGCVTWAFLNLSAIGLMNRSNLGGLRV-KFSPTNVTL 502
++ C L + + P +GK+K +F+S CV L + L L R K +T
Sbjct: 1166 IILSCLLAWIIKPDLGKEKDSFTSHCV---LLRHEEVSLPAARKLKKCRERKVKRRWLTT 1222
Query: 501 VTMRFQAFLF 472
T+ AFLF
Sbjct: 1223 TTIEIAAFLF 1232
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 185 IKAKIFNKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPV---YLLDRDVQSRAKVL 355
IKAK + + R + + K E +N+K N EK PV + D+ S ++ L
Sbjct: 1241 IKAKFVDLKHRWDALNESVPAKKSEAENIKENIEKYNSAFQPVREAFTQAEDLLSFSEPL 1300
Query: 356 SNMIKQKRKEKAGK 397
K+ ++GK
Sbjct: 1301 DRKADVKQMNQSGK 1314
>SB_12098| Best HMM Match : p450 (HMM E-Value=1.7e-06)
Length = 403
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 410 IPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPM 571
+P + + +V K++ KR++ ++TK+TF E F P F++F + +
Sbjct: 178 VPLLESHISRQVKKLVALLMKKRESVADVITKMTF-DEAFNASHPSFDKFFKTL 230
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 188 KAKIFNKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMI 367
K + K R+N I+ K +K + K VK K E + + RAK+ + M
Sbjct: 460 KMEALEKRRQNNWIEEAKPVKK-KLKRVKPKVAKPDEAKAAAHAKSAVQEMRAKMRAKMA 518
Query: 368 KQKRK 382
+ KRK
Sbjct: 519 ENKRK 523
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/92 (25%), Positives = 46/92 (50%)
Frame = +2
Query: 212 RRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKA 391
R + +Q+++++K ++ + +++ E + LL ++V R K I+Q+ +E+
Sbjct: 4777 RDHMDLQLQQQLKQQYKQVQEQFQQQLHEQQQKIQLL-QEVLERQKA---RIEQQSEEEV 4832
Query: 392 GKWDVPIPKVRAQADAEVFKVLKSGKSKRKAW 487
VP P A+ D F+ LK SK + W
Sbjct: 4833 ----VPAPPTEAEGDNMSFEALKIAFSKLQGW 4860
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 326 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 442
+DV+ R K + +K KE G+ D+P+P ++ E
Sbjct: 685 KDVRKRTKEIVKSLKHFLKETKGEVDIPLPPAPEVSEPE 723
>SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 28.3 bits (60), Expect = 6.7
Identities = 31/132 (23%), Positives = 55/132 (41%)
Frame = +2
Query: 221 EKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKW 400
EKI++K H NVK + + E +Y L + V + +I Q R +
Sbjct: 714 EKIEVKNVSSNHVGSNVKEGLDNMIERYSSLYALLKGVAWMMRFKKYLIHQVR--RPSNV 771
Query: 401 DVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALR 580
D+ I + AQ +E + ++ ++M K+ V E ++ + + + R R
Sbjct: 772 DLKIGDLTAQEISEAENEIVKYVQRQSFPRKM--KILEVEER--KRTEEEKDYSRSSGRR 827
Query: 581 FKKAHVTHPELK 616
+A T P LK
Sbjct: 828 LNRAPYTSPLLK 839
>SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 350 VLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENF 529
+++N K KRK A + V I +A+++ K+ + ++AWK + + + EN
Sbjct: 234 LINNRDKLKRKAMASRNKVNIALRQAKSNYYRNKIANQKNNPKEAWKTINSLLGRTKENT 293
Query: 530 TRKPPKFE 553
T KF+
Sbjct: 294 TVNELKFD 301
>SB_29236| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 834
Score = 27.9 bits (59), Expect = 8.9
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Frame = -2
Query: 385 LFALLFYHVR*YFSPRLNIP--VQ*INRQGTFGDLLCVMFDILLFVRFDFLFHLNLFIAA 212
LFA++ Y+VR Y PR I + + FG L+C F L F R ++ L
Sbjct: 411 LFAVVLYNVRTYADPRALIQNGLWVVKFGLFFGLLVCTFFIPLEFSR--VWTYVGLLGTF 468
Query: 211 FLIEYFSFDTAEFARLFSA-FMRLTSFT---LPFSLLII*PSTVKLLMALNI--FVLRHV 50
F I +F R+++A F R T T + F +L+ T+ ++ ++ F + V
Sbjct: 469 FFIVMQMILLVDFTRVWNASFARRTERTGKRIWFHILVFTTVTLYVISGASVVCFYMFFV 528
Query: 49 GCLFGNLRCHHT 14
G + G R + T
Sbjct: 529 GSI-GRCRTNKT 539
>SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05)
Length = 315
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 206 KERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKE 385
K +N+K +MKKK+K EK K +++ +G L D D + + + N I+ E
Sbjct: 215 KLSKNKKKKMKKKLKKQIEKQ-KLQQDEIEQGLLQ----DSDDKDKETLGDNCIESNDME 269
Query: 386 KAGK 397
++ K
Sbjct: 270 ESAK 273
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 206 KERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGAL---PVYLLDRDVQSRAKVLSNMIKQK 376
K RN+ I++++K+KA EE+N + E + + + +L + K +++
Sbjct: 452 KNERNKIIELEEKLKALEEQNSQRQEEYDSNKSTHENELLVLKAKHEEELKETKQQLEEL 511
Query: 377 RKEKAGK 397
KEK+ K
Sbjct: 512 EKEKSEK 518
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,402,980
Number of Sequences: 59808
Number of extensions: 361556
Number of successful extensions: 1097
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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