Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10c22
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 3e-37
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 38 0.009
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 34 0.14
SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72) 33 0.33
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044) 31 1.3
SB_51854| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05) 29 4.1
SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14) 29 5.4
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 29 5.4
SB_59648| Best HMM Match : Albicidin_res (HMM E-Value=0.63) 28 7.1
SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17) 28 9.4
SB_3840| Best HMM Match : MANEC (HMM E-Value=0.031) 28 9.4
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 152 bits (369), Expect = 3e-37
Identities = 71/140 (50%), Positives = 99/140 (70%)
Frame = +3
Query: 189 PLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYS 368
PLT L+E+E M++++ + A E+I PLV +M+ ++D GI + LF+ GLMGIE EY
Sbjct: 38 PLTQLSEEEEMMKQSVARFAKEKIQPLVSEMDQNSQMDPGIIKGLFEQGLMGIEIGSEYG 97
Query: 369 GSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYAG 548
G+ F LV+EEL++VDP+V+ D+ NTL+N+L M GT+EQK++YL +L G
Sbjct: 98 GTDSTFFAANLVIEELAKVDPSVSVMCDVQNTLINNLIMTYGTKEQKQEYLPQLAQHMVG 157
Query: 549 SFCLTEPSSGSDAFALKTVA 608
FCL+E SSGSDAFALKTVA
Sbjct: 158 GFCLSEESSGSDAFALKTVA 177
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/30 (60%), Positives = 27/30 (90%)
Frame = +1
Query: 625 HYIISGSKMWISNSDVAGVFLVMTNADPSK 714
H++++GSKMWI+N++ AGVFLVM N +PS+
Sbjct: 183 HFVLNGSKMWITNAEYAGVFLVMANVNPSE 212
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 715 GYKGITCFIVERET 756
GYKGIT FIV RET
Sbjct: 259 GYKGITTFIVPRET 272
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Frame = +3
Query: 192 LTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQM---LFDNGLMGIETPVE 362
LT LT +++ +RE +++P +++ E+ +R+ L D G GI PV+
Sbjct: 38 LTGLTSEQIHLREVAYNFCQNELAPYADQIDKENNFPK-LREFWKKLGDLGFHGITVPVD 96
Query: 363 YSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-E 539
G G ++ ++V+EE+SRV ++A H+ L + + G +EQK+KYL KL + E
Sbjct: 97 DGGIGSGYMEHIIVLEEMSRVSGSIALSYGAHSNLCINQIARNGNKEQKRKYLPKLLSGE 156
Query: 540 YAGSFCLTEPSSGSDAFALKTVAKK 614
+ G+ ++E ++GSD ++K A K
Sbjct: 157 HIGALAMSEANAGSDVVSMKLRADK 181
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 616 EGEHYIISGSKMWISNSDVAGVFLVMTNADPS--KGYKGITCFIVER 750
+G+HY+++G KMWI+N A V +V +PS K IT F+VE+
Sbjct: 182 DGDHYVLNGHKMWITNGPDADVLIVYAKTNPSSKKPEHAITTFLVEK 228
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 192 LTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSG 371
L L E +R+T R A +++P+ K + EHR +ML + GL+G+E P G
Sbjct: 38 LAKLPETHEMLRKTCRDFADNELTPVAGKFDKEHRYPQEKVKMLGELGLLGVEVPESLGG 97
Query: 372 SGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTK-LCTEYAG 548
+G + + +EE+SR ++ + ++N GT+ QK++++ L + G
Sbjct: 98 TGLDAFAYAIAMEEISRGCASLGCIMSVNN---------YGTDAQKEEWIKPFLNGDRVG 148
Query: 549 SFCLTEPSSGSDAFALKTVA 608
F L+EP +GSDA A KT A
Sbjct: 149 CFALSEPDNGSDAGAAKTTA 168
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +1
Query: 616 EGEHYIISGSKMWISN 663
+G+HY+++G+K WI+N
Sbjct: 171 DGDHYVLNGTKAWITN 186
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 58.4 bits (135), Expect = 6e-09
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Frame = +3
Query: 195 TMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDN-GLMGIETPVEYSG 371
++ T+D + +RE + K ++I+P V + E F G G+ PV+Y G
Sbjct: 256 SIFTDDHVQLRENLNKFIEKEINPFVDEWEKAKMFPAHELFKKFGKAGYFGVNKPVKYGG 315
Query: 372 SGCNFLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLT-KLCTEYA 545
G ++ + + EEL + V + + + ++ G+EE K+++L + ++
Sbjct: 316 MGLDYSFSVAMAEELGSIKCGGVPMAIGVQADMATPALVRFGSEELKQQFLVPTIAGDFV 375
Query: 546 GSFCLTEPSSGSDAFALKTVAKK 614
++E +GSD ++KT A K
Sbjct: 376 TCLGVSETGAGSDVASIKTTAVK 398
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 616 EGEHYIISGSKMWISNSDVAGVFLVMTNAD 705
+G+ Y+I+G KMW +N A ++ N D
Sbjct: 399 DGDDYVINGGKMWTTNGIQADWMCLLANTD 428
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 369 GSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YA 545
G G L +V EELS + ++ N+L + G EEQKKKYL ++ E
Sbjct: 176 GIGLGVLDGCVVTEELSYACSGIQTAIEA-NSLAEMPVILAGNEEQKKKYLGRMIKEPIM 234
Query: 546 GSFCLTEPSSGSDAFALKTVAKK 614
++C+TEP++GSD +KT A+K
Sbjct: 235 AAYCVTEPTAGSDVAGIKTRAEK 257
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 496 QKNKKRNI*RNSARNMLAVSVSQSPAQDQMXXXXXXXXXXEGEHYIISGSKMWISNSDVA 675
++ KK+ + R ++A P +G+ Y+I+G KMWI+N VA
Sbjct: 218 EEQKKKYLGRMIKEPIMAAYCVTEPTAGSDVAGIKTRAEKKGDEYVINGQKMWITNGGVA 277
Query: 676 GVFLVMTNADPS-KGYKGITCFIVERET 756
+ V+ D S KG T FIV+ +T
Sbjct: 278 NWYFVLARTDSSASAGKGFTGFIVDADT 305
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 49.6 bits (113), Expect = 3e-06
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Frame = +3
Query: 183 PRPLTMLTEDEL-AMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPV 359
P LT E+EL A E + K E P K ++ +++ + + L + G G++ P
Sbjct: 17 PEVLTQDQEEELRAFVEPVSKFFEEVNDPA--KNDELETVEEHVMESLKEMGAFGLQVPA 74
Query: 360 EYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE 539
+ G G +VE + D AV + H ++ + G + K +
Sbjct: 75 DLGGVGLTNTQYARMVEIVGAHDLAVGIVLGAHQSIGFKGILLFGNKVATGK-------K 127
Query: 540 YAGSFCLTEPSSGSDA 587
YA +FCLTEPSSGSDA
Sbjct: 128 YA-AFCLTEPSSGSDA 142
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 616 EGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERET 756
+G+ Y+I+GSKMWI+NS A ++ N K + + +V T
Sbjct: 26 DGDDYVINGSKMWITNSPSADFICLLANTSDDKPHVNKSLIMVPMNT 72
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/99 (21%), Positives = 48/99 (48%)
Frame = +3
Query: 78 LRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQ 257
+RRV+G+ E + + A KT+M+ + P+ LT+ T+R++ E+
Sbjct: 891 VRRVIGDIEEEPQATTSVAYALMKTKMEQHFVSAFPKRAKTLTKST-----TLRRIQEER 945
Query: 258 ISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGS 374
+ +++K ++R+ +R+ + + TP ++ S
Sbjct: 946 AASIIQKCYRQYRLQRELRRYRIERSHESVHTPNDHRRS 984
>SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72)
Length = 298
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 174 EVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDG 308
E+T R + ++ RK TEQ S L+K+M+DE +D G
Sbjct: 56 ELTGRKAVSMQPSSDLLKPRPRKTETEQTSDLIKQMKDECAVDSG 100
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 492 GTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDA 587
G+ EQKKK+L L E +FC+TEP + SDA
Sbjct: 138 GSPEQKKKWLDPLLNGEMRSAFCMTEPGVASSDA 171
>SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 750
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 93 GNKILE-QWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIR-KLATEQISP 266
G K+L QW ++ Q KAY TPR +T+ + D + + + R + +
Sbjct: 625 GEKVLALQWSRESRQTERGIHQAKAYIEMKTPRQITLPSADFIKRQRSEREQCQRSNLKG 684
Query: 267 LVK-KMEDEHRIDDGIRQM 320
V+ K+ D + ID +QM
Sbjct: 685 QVRIKLNDRNNIDTSSKQM 703
>SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044)
Length = 156
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 492 GTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDA 587
G+ EQKKK+L L + +FC+TEP + SDA
Sbjct: 98 GSPEQKKKWLDPLLNGDIRSAFCMTEPGVASSDA 131
>SB_51854| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05)
Length = 447
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 3 VLIEIASAEAARFHSANANRIKMFPLRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVT 182
+++ + E R S+ A+++ P R++ LE+ +QAT + TQ KA+ E+T
Sbjct: 64 LIVNVRDFEQRRTGSSEADKLSTVP-RKLPRKPTLEEL-NQATNVITKATQAKAFEVEMT 121
>SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14)
Length = 490
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 450 DIHNTLVNSLFMKLGTEEQKKKYLTKL-CTEYAGSFCLTEPSSGSDAFALKTVA 608
D+H + +GT+EQ++K+L + G+F TE G+ L+T A
Sbjct: 136 DLHRVMFMPTIKLMGTKEQQEKWLPLAEMHQILGTFAQTELGHGTFVRGLETTA 189
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +2
Query: 524 ETLHGICWQFLSHRAQLRIRCFCLENCCQKKKENITSLAALKCGSRTLMSL 676
E LH C LS + RI F L N C +K + + K S T L
Sbjct: 827 EDLHASCLMLLSRKHGARIVVFELANACDDRKYEVRMIGKSKGVSVTSRDL 877
>SB_59648| Best HMM Match : Albicidin_res (HMM E-Value=0.63)
Length = 139
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 333 GLMGIETPVEYSGSG----CNFLTMMLVVEELSRVDP 431
G G+E P EY G C++L LV+EE DP
Sbjct: 90 GGYGLEIPCEYIFEGDSFSCSWLKRKLVIEEFDATDP 126
>SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 155 DESIQHRSYPTTFDHADRR*TRHEGNNTETSDRTNKSACEENG 283
+ S+QH S T +HA++R T G++T + + E G
Sbjct: 314 EPSVQHVSSTGTMEHAEQRVTSDAGSDTSIRIMSREMEAREGG 356
>SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17)
Length = 551
Score = 27.9 bits (59), Expect = 9.4
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 616 EGEHYIISGSKMWIS 660
+G+HY+++G K WIS
Sbjct: 365 DGDHYVLNGRKWWIS 379
>SB_3840| Best HMM Match : MANEC (HMM E-Value=0.031)
Length = 533
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +2
Query: 500 RTKKEIFNETL-HGICWQFLSHRAQLRIRCFCLENCCQKKKENITSLAALKCGS---RTL 667
R +FN+TL HG+ + +++ C++ CCQ + N+ + L C + +L
Sbjct: 288 RASGVLFNKTLIHGLKSGDFTDYGKVKDMGTCVKFCCQDDRCNMALMLGLTCYTLHCTSL 347
Query: 668 MSLESF***PMLILPRVTRASPALSLNVKP 757
++ P + PR+T +L +KP
Sbjct: 348 LTCRVRPAHPSSLNPRITFVFRDKTLKLKP 377
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 27.9 bits (59), Expect = 9.4
Identities = 30/148 (20%), Positives = 60/148 (40%)
Frame = +3
Query: 96 NKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVK 275
+K+LE W A AV A + + L DE+ +R EQ+ ++
Sbjct: 68 DKVLEDWAEDAQRAVDAMKLEVRDAADFLFGSLDGAARDEVRLRSRDEWETPEQLFAVLT 127
Query: 276 KMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDI 455
+ E + Q + E+ ++S S +M++++++ + P A D
Sbjct: 128 ETFGEKLTATQLLQRFYGRRQRERESIQDFSHS------LMVLMDKIQKCHPGTIANPDK 181
Query: 456 HNTLVNSLFMKLGTEEQKKKYLTKLCTE 539
TL F++ ++Q ++ L K+ E
Sbjct: 182 DRTL-RDTFVENLQDQQLRRDLKKMIRE 208
>SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 389 DNDVGGGRTVSSGPSRGRLRRHSQHLSQLSVHEARYRRT 505
D VG +SS R LR H + S + H YR T
Sbjct: 77 DTYVGTFAVISSADGRKSLRTHKERTSYMKEHLKNYRST 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,307,482
Number of Sequences: 59808
Number of extensions: 488071
Number of successful extensions: 1561
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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