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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10c19
         (647 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)             47   1e-05
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)                38   0.007
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)               36   0.038
SB_29786| Best HMM Match : I-set (HMM E-Value=0)                       33   0.26 
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)                33   0.26 
SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12)                32   0.35 
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)             32   0.35 
SB_23016| Best HMM Match : efhand (HMM E-Value=3e-12)                  32   0.46 
SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)                  32   0.46 
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)                31   0.61 
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)                  31   0.61 
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.81 
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)                31   0.81 
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)                31   0.81 
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)            31   1.1  
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)                30   1.4  
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)                30   1.4  
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)                30   1.9  
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)                  30   1.9  
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)                30   1.9  
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)                29   2.5  
SB_45680| Best HMM Match : DUF1174 (HMM E-Value=9.4)                   29   3.3  
SB_59274| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_3738| Best HMM Match : efhand (HMM E-Value=8.5e-05)                 29   3.3  
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_54208| Best HMM Match : fn3 (HMM E-Value=0)                         28   5.7  
SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12)                28   5.7  
SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64)                    28   5.7  
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)             28   7.5  
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_12193| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)                     27   9.9  
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)                 27   9.9  
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)                   27   9.9  

>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
          Length = 153

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
 Frame = +1

Query: 70  AFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQ 249
           + FD +GSGTI  ++ E+    + KS G +  D   +E+Q  + +V       D D +G+
Sbjct: 7   SLFDKDGSGTISNEELEV----VMKSLGQNPSD---EELQQMIQEV-------DADGNGE 52

Query: 250 VSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFG--LDKAE 423
           V  EE++++ +K          +  +  F++ D + DGSI   E  SV AS G  L   E
Sbjct: 53  VDFEEFLAMMKKQMQHRDAEAEM--REAFRVFDRNGDGSISEWELRSVMASLGEKLSDDE 110

Query: 424 AASAFQKLS-KGKSSVSFAEFQELFKE 501
                ++    G   ++F EF ++ +E
Sbjct: 111 IKEMMREADLDGDGVINFQEFVQMVRE 137


>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
          Length = 156

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
 Frame = +1

Query: 229 DTDNDGQVSKEEWIS-LWEKFSSSPSDWQNLYCKF-----IFQLEDASNDGSIDSEEFSS 390
           D D  G VS +E+ + + +K +    D ++ Y K      +F+  D    GSID EEF  
Sbjct: 59  DKDGSGSVSFDEFYTWIHDKNTLQNIDDKSRYHKIRKAIEMFKKYDKDASGSIDREEFKQ 118

Query: 391 VYASFGLDKAEAASAFQKLSK-GKSSVSFAEF 483
           +    G +K     A +KL K G   +SF EF
Sbjct: 119 LMHETG-NKVNIDKALKKLDKDGNGQISFTEF 149


>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
 Frame = +1

Query: 193 TLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSID 372
           T+ ++ D L++ D + DG +  +E++++   F    ++      +  F++ D + DG I 
Sbjct: 176 TISQILDILNAFDKNGDGAIDFDEFVTMSRYFRGRGAEKLEENLRQAFRVFDRNGDGYIS 235

Query: 373 SEEFSSVYASFG--LDKAEAASAFQKLSK-GKSSVSFAEFQELFKE 501
           +EE      + G  L + EA      L + G   + + EF  + K+
Sbjct: 236 AEELRVAVTTLGDALTQDEAEELIGMLDQDGDGKLGYEEFVVIAKK 281


>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
          Length = 6300

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 20/92 (21%), Positives = 42/92 (45%)
 Frame = +1

Query: 235  DNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLD 414
            + DG+  KEEW SLW+   S   D   + C+F   +   +     ++ +  ++   FG++
Sbjct: 791  ETDGR--KEEWTSLWDYHKSKLED-SIMICEFEQDISKVNLLIEQNNRDLIALNQKFGVN 847

Query: 415  KAEAASAFQKLSKGKSSVSFAEFQELFKEYFA 510
              ++ +  Q+      SV  A  +  +K + +
Sbjct: 848  LLDSVTLLQESDAFLESVKIASMETRWKRFLS 879


>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
          Length = 127

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 18/106 (16%)
 Frame = +1

Query: 28  VSDFRKKKLLHVFTAFFDTNGSGTIDKKDFELAIERISKSRGWSA---------GDAQYK 180
           +++ +K+++   F   FDT+GSGTID K  EL  E+ SK     A         G   +K
Sbjct: 23  LTEEQKQEIREAFD-LFDTDGSGTIDAK--ELKSEKDSKEEILKAFKLFDDDETGKISFK 79

Query: 181 EVQDTLLKVWDGLS---------SADTDNDGQVSKEEWISLWEKFS 291
            ++    ++ + L+          AD D DG++++ E++ + +K S
Sbjct: 80  NLKRVAKELGENLTDEELQEMIDEADRDGDGEINEAEFLRIMKKTS 125


>SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12)
          Length = 923

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 229 DTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVY 396
           D DN+G ++ +E+ SLW+      +DWQ  +  +     D  + G+ID  E  + Y
Sbjct: 23  DRDNNGTINFQEFSSLWKYI----TDWQTTFRNY-----DRDSSGTIDKNELQNGY 69


>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
          Length = 1026

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 23/77 (29%), Positives = 38/77 (49%)
 Frame = +1

Query: 163 GDAQYKEVQDTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQL 342
           G  + +E  +T L++  G+   D   DG +S  E+++ +E     P      + K IFQL
Sbjct: 720 GMQRIEEYNETTLELLAGV--VDQTKDGLISFSEFVA-FEALLRDPDS----HHKLIFQL 772

Query: 343 EDASNDGSIDSEEFSSV 393
            D    GS+  +EF +V
Sbjct: 773 FDLDGKGSVSYDEFRNV 789


>SB_23016| Best HMM Match : efhand (HMM E-Value=3e-12)
          Length = 387

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
 Frame = +1

Query: 172 QYKEVQDTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDA 351
           +Y+ ++D +++  + L   D + DG VS E+ +    +      DW     +    + D 
Sbjct: 200 EYEYMKDVVVE--ETLDDIDKNKDGYVSLEDDLYPESEKEDEEPDWVKTEREQFLTVRDK 257

Query: 352 SNDGSIDSEEFSS--VYASFGLDKAEAASAFQKLSKGKSSVS 471
           + DG +D +E     V A F    AE      +    K  VS
Sbjct: 258 NRDGKMDKDEVRDWIVPADFDHVGAEVTHLINEADVNKGGVS 299


>SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)
          Length = 133

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +1

Query: 325 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEY 504
           K  F + D + DG ID E+   +YAS G    +            S+++F  F  LF E 
Sbjct: 34  KEAFNMIDQNRDGFIDKEDLKDMYASLGKSPNDQFLDDMIEEASGSTINFTMFLTLFGEK 93

Query: 505 FASED 519
               D
Sbjct: 94  LNGTD 98


>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
          Length = 150

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +1

Query: 334 FQLEDASNDGSIDSEEFSSVYASFGLD--KAEAASAFQKLS-KGKSSVSFAEFQELFKEY 504
           F+L D   D  IDS +   V    G +   AE      ++  +G + +SF EF  +++ Y
Sbjct: 17  FELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSEMDPEGGNRISFEEFLPVYQSY 76

Query: 505 FASEDVNAPGNFV 543
              +   +  +FV
Sbjct: 77  MGKKPKFSTEDFV 89


>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
          Length = 176

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = +1

Query: 190 DTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSI 369
           D + ++       D DN G +S EE++SL       P   QN   + +  + DA  +G +
Sbjct: 39  DEIRRLGKRFRKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVITIFDADGNGEV 91

Query: 370 DSEEFSSVYASFGL 411
           D +EF    + F +
Sbjct: 92  DFKEFIEGVSQFSV 105


>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 959

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 310 QNLYCKFIFQLEDASND--GSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEF 483
           Q++YC+F+   +  S D   +++ +  S V        AE  S F K  K  S+VSF   
Sbjct: 729 QDVYCRFLLSYDLLSQDEKSTLEEQVKSEVQDRSTRTDAEKESQFVKKGKYHSAVSFQRV 788

Query: 484 QELFKEYF 507
               +E+F
Sbjct: 789 ARNTQEHF 796


>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
          Length = 659

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = +1

Query: 217 LSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVY 396
           +  AD D DGQV+ +E   + E+F   P D ++    ++ ++++ SN      EE + ++
Sbjct: 115 IREADIDGDGQVNYDEDSLVEERF---PIDTRS----YLRRIQELSNGVGHHPEEAAPIF 167

Query: 397 ASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFK 498
            ++ L K +A S F     G    S  E Q L K
Sbjct: 168 VTWRLVK-QARSPFDAQGVGHRDKSTNEPQGLIK 200


>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
          Length = 250

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = +1

Query: 217 LSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVY 396
           +  AD D DGQV+ +E   + E+F   P D ++    ++ ++++ SN      EE + ++
Sbjct: 115 IREADIDGDGQVNYDEDSLVEERF---PIDTRS----YLRRIQELSNGVGHHPEEAAPIF 167

Query: 397 ASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFK 498
            ++ L K +A S F     G    S  E Q L K
Sbjct: 168 VTWRLVK-QARSPFDAQGVGHRDKSTNEPQGLIK 200


>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
          Length = 779

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +1

Query: 226 ADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 384
           AD + DG +S++E   L EK+    SD    + + ++   D ++DG +D +EF
Sbjct: 550 ADDNRDGTISRDELRRLLEKYCLPVSD---EHFEMLWGHCDVNSDGHVDFQEF 599



 Score = 29.1 bits (62), Expect = 3.3
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
 Frame = +1

Query: 235 DNDGQVSKEEWIS-LWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGL 411
           D  GQ S +E +  L E  S    D +  + KF     + + DG +  +EF  V  S GL
Sbjct: 647 DLTGQKSADECMEILKEHISQRSPDIRKTFIKF----NNVNGDGKLSRKEFREVLDSLGL 702

Query: 412 ----DKAEAASAFQKLSKGKSSVSFAEFQELFKE 501
               D+    SA     KGK  +++ +F + F++
Sbjct: 703 YMTDDQYRILSARLGFHKGK--LTYRDFLDNFQD 734


>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
          Length = 308

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +1

Query: 205 VWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEE 381
           + + +   D D DG +S +E++  +E+      DW         +  D + DG +D  E
Sbjct: 188 ILETIEDIDRDKDGLISLKEFLGEYEEEPGEVPDWVKDETNRFNEEYDKNKDGKLDKSE 246


>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
          Length = 190

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 25/73 (34%), Positives = 36/73 (49%)
 Frame = +1

Query: 58  HVFTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTD 237
           HVF  F D NG GTID ++F  A+   S+      G  + K      LK W   S  D D
Sbjct: 67  HVFRTF-DANGDGTIDFREFICALSVTSR------GKLEQK------LK-W-AFSMYDLD 111

Query: 238 NDGQVSKEEWISL 276
            +G +S++E + +
Sbjct: 112 GNGYISRQEMLEI 124


>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
          Length = 191

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 58  HVFTAFFDTNGSGTIDKKDFELAIERISKSR 150
           HVF  F D NG GTID ++F  A+   S+ +
Sbjct: 67  HVFRTF-DANGDGTIDFREFICALSVTSRGK 96


>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
          Length = 132

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +1

Query: 331 IFQLEDASNDGSIDSEEFSSVYASFGLDKA--EAASAFQKLSK-GKSSVSFAEFQEL 492
           +F + D  N GSID++E   V    G + +  E         K G   + FA+F +L
Sbjct: 8   VFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADADKDGSGEIRFAQFMQL 64


>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 350

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = +1

Query: 325 KFIFQLEDASNDGSIDSEEFSSVYASFGL---DKAEAASAFQKLSKGKSSVSFAEFQEL 492
           K  F   D + DG ID+EE   V  S GL   D+   A   Q    G   +   EF EL
Sbjct: 18  KNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIEL 76


>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
          Length = 776

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 58  HVFTAFFDTNGSGTIDKKDFELAIERISKSR 150
           HVF  F D NG GTID ++F  A+   S+ +
Sbjct: 67  HVFRTF-DKNGDGTIDFREFICALSVTSRGK 96


>SB_45680| Best HMM Match : DUF1174 (HMM E-Value=9.4)
          Length = 212

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -1

Query: 569 ILQKLVFPKTKFPGAFTSSEAKYSLNNSWNSAKETDDLPLDSF*KADAASALSRP 405
           IL + V P+T+ P   +S+  + S   + +S+K + DLP     +    S LSRP
Sbjct: 129 ILAEPVKPETETPAVHSSTVGETSTATAPSSSKNSTDLPCVPTLRFGVDSLLSRP 183


>SB_59274| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 341

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 25/82 (30%), Positives = 41/82 (50%)
 Frame = +1

Query: 52  LLHVFTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSAD 231
           LLH+   F D +    +++K  +L IER      +   +  +KE+Q  L K W       
Sbjct: 40  LLHLSNDFRDLDFKHNLEEK-LKL-IERAETLATYENVNDAFKELQQ-LHKAWK------ 90

Query: 232 TDNDGQVSKEEWISLWEKFSSS 297
            ++ G VSKE+   +W+KFS +
Sbjct: 91  -EDVGPVSKEQREEVWQKFSDA 111


>SB_3738| Best HMM Match : efhand (HMM E-Value=8.5e-05)
          Length = 447

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 76  FDTNGSGTIDKKDFELAIERI 138
           FD+NG GTID ++ +LA+  +
Sbjct: 69  FDSNGGGTIDAEELDLALRSV 89


>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 289

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 193 TLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSID 372
           T + V + +   D+D DG++S  E+  L      +    ++L   F   L D   DGS++
Sbjct: 198 TSVLVQENMEMLDSDKDGKISFAEYAGLDGTGEDNQDSLKSLKDDFNNDL-DKDKDGSLN 256

Query: 373 SEEFSSV 393
            + F +V
Sbjct: 257 KDNFLTV 263


>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 956

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 245 AKSPKKSGFPSGRSFPAAPVTGRIYTAS 328
           A  P  SGF  G + PAAP  G++ TA+
Sbjct: 906 ASLPAPSGFTFGSTSPAAPAFGQLATAA 933


>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
          Length = 1292

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 164 PALQPLDLDILSMASSKSFLSMVPLPLVSKKAV 66
           P++ PL+L + ++ +S  F+S  PLP  S   V
Sbjct: 404 PSMPPLNLTVTNITTSSFFVSWSPLPADSANGV 436


>SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12)
          Length = 146

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +1

Query: 229 DTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFG 408
           D D  G++  +E++S     S    D +    ++ F++ D +NDGSI   E   +  ++ 
Sbjct: 72  DDDRSGRIDFKEFMSSLSVTSRGNLDEK---LEWAFRIYDINNDGSISRMEMIEIIEAYK 128

Query: 409 LDKAEAASAFQKLS 450
           + ++  +S     S
Sbjct: 129 VGRSNRSSQIDSSS 142


>SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64)
          Length = 1294

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 384 EFLAVDGPVITSILKLKYKLAV*ILPVTGAAGKLLPEGNPLFFGDL 247
           E +AVD   I   L+L +KL +  LP+  A    L E N    GD+
Sbjct: 594 EIVAVDVAAIVPALELTFKLGLSYLPLAQAGLAALEEWNASLPGDV 639


>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 299

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
 Frame = +1

Query: 211 DGLSSADTDNDGQVSKEEWISLWEKFSSSP------SDWQNLYCKFI---FQLEDASNDG 363
           D  S  D + D ++S+EE  +   K + +         WQ+ + + +   F+ ED   DG
Sbjct: 220 DMFSHMDENGDRKLSREEVSAYMRKQAEAQFAPTYDQRWQHHHERMVDNVFEYEDHDEDG 279

Query: 364 SIDSEEFS 387
            I  EEFS
Sbjct: 280 HISHEEFS 287


>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
          Length = 3810

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 292  WKTSPRGKSTLLWRLGRRYRCQRCSTHPRPSKACLELLCTEH 167
            WK+ PRG  +    L R  +C++C     P K C EL  T +
Sbjct: 1882 WKSCPRGTYSNTPGLSRSGQCKQCD----PGKFCGELHATSY 1919


>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 195

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 23/73 (31%), Positives = 34/73 (46%)
 Frame = +1

Query: 58  HVFTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTD 237
           HVF  F D N  GTID  +F   +  IS+              ++T L+ W      D+D
Sbjct: 70  HVFRTF-DKNNDGTIDFNEFIQGLSIISRGS------------KETKLR-W-AFEIYDSD 114

Query: 238 NDGQVSKEEWISL 276
             G+VSK+E + +
Sbjct: 115 GSGEVSKKEMLEI 127


>SB_12193| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 46  KKLLHVFTAFFDTNGSGTIDKKDFELAIE-RISKSR 150
           K++   F AF DT+GSGTID  +F + +   +SK+R
Sbjct: 78  KEVKRTFEAF-DTDGSGTIDFDEFLIRLRPPMSKAR 112


>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
          Length = 1072

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +1

Query: 181 EVQDTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASND 360
           EV+  +   +DG        +G V+KEE +SL E   +SPS+      + +F++E    D
Sbjct: 543 EVETPVAATFDGQDEVAA-KEGDVAKEETLSLEEGEVNSPSE-PPKKDEVVFKVETEEMD 600

Query: 361 GSIDSE 378
            S+  E
Sbjct: 601 QSLVGE 606


>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
          Length = 497

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +1

Query: 199 LKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSE 378
           L+  D  +  D D    VS EE I   ++     +D Q    K +  L D   DG ID  
Sbjct: 434 LRAVDLFNCLDKDKSRSVSPEELIEGLKRARIPLTDSQ---LKRLITLLDKDGDGMIDYS 490

Query: 379 EFSSV 393
           EF++V
Sbjct: 491 EFAAV 495


>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 987

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +1

Query: 331 IFQLEDASNDGSIDSEEFSSVYASF 405
           +F++ D + DG+I S+EF ++  +F
Sbjct: 286 VFRVYDTNKDGTISSKEFDAIATNF 310


>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
          Length = 494

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +2

Query: 107 KRTLNLPLKG-YPNREAGVLEMLSTKKFKTRF*RSGMG*AALTPITTAKSPKKSGFPSGR 283
           + +++LP  G  P+  A V +  S+ + +    +SG     L P T  + PKKSG P+G+
Sbjct: 209 RTSMSLPFSGTLPSEPARVEQPPSSARSR----KSGNLYDELRPYTAPELPKKSGKPAGK 264

Query: 284 S 286
           +
Sbjct: 265 N 265


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,331,037
Number of Sequences: 59808
Number of extensions: 439726
Number of successful extensions: 1431
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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