Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10a10
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 4e-33
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 101 4e-22
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 80 2e-15
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 60 2e-09
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 2e-05
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 46 2e-05
SB_15403| Best HMM Match : CH (HMM E-Value=0) 46 2e-05
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 38 0.010
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 33 0.17
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 33 0.30
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 0.68
SB_47581| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006) 31 1.2
SB_2354| Best HMM Match : GRP (HMM E-Value=3.9) 30 1.6
SB_49814| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29188| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 29 2.8
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 2.8
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_56359| Best HMM Match : Bcl-2 (HMM E-Value=7e-30) 29 3.6
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 29 3.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018) 29 4.8
SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34769| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_595| Best HMM Match : CH (HMM E-Value=0) 28 8.4
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 138 bits (334), Expect = 4e-33
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Frame = +1
Query: 103 QARIHSKYNDEIAQETLEWIRKLTGEPA-NTSGDADNLYEVLKDGTLLCKLVNELQPGSV 279
+A I SKY+ +E +WI + GE +G D +++ LKDG +LC+L N L G
Sbjct: 421 KAGIDSKYDPTKEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRL--GGD 478
Query: 280 KKINQTTMAFKCMENINAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSLGRKA 456
KINQ M FK MENI FL ++ LGV + FQT+DL+E+ N+++V+ C+ ++GR+A
Sbjct: 479 LKINQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRRA 538
Query: 457 GNFGK--PSIGPKEADKNVRDFSEEQLKAGQNVI-SLQYG---TNKGQQSGISFGNRRQM 618
+ GK P +GPKE+ KN R F+E QL G+ +I S Q G N SG SFG +RQ+
Sbjct: 539 YSLGKDVPQLGPKESTKNPRQFTERQLNEGKTIINSFQMGPAAKNVATASGQSFGRQRQI 598
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 128 bits (309), Expect = 4e-30
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Frame = +1
Query: 118 SKYNDEIAQETLEWIRKLTGEPA-NTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQ 294
+KY+ ++A + WI + GE AD+++EVLKDG +LC++ N+L G KIN
Sbjct: 62 AKYDSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKL--GGNIKINS 119
Query: 295 TTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGRKAGNFGKP 474
+ MAFK MEN FLE +GVP + FQT+DL+E+QN+ V+ + +LGRKA + GK
Sbjct: 120 SKMAFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGKT 179
Query: 475 --SIGPKEADKNVRDFSEEQLKAGQ 543
++GPKEA N R+F+EEQ +AGQ
Sbjct: 180 CLALGPKEASANPREFTEEQRRAGQ 204
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 101 bits (243), Expect = 4e-22
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +1
Query: 85 GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDA-DNLYEVLKDGTLLCKLVNE 261
G++A A +I KY+ + +E WI + GE + D++ +VLKDG +L +L +
Sbjct: 9 GMSAAANRKILEKYDPQQEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIK 68
Query: 262 LQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQS 441
L G+ K+N+ M FK MENI FL LGV + + FQT DL++ N+ S C
Sbjct: 69 L--GAKIKVNEQNMPFKQMENIGNFLSHCGHLGVASGDQFQTADLYDNANMTS---C--- 120
Query: 442 LGRKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVI 552
+ + P++GPKEA+ NVR+F+EEQL+AG++++
Sbjct: 121 --QLIKDLDIPTLGPKEAEANVREFTEEQLRAGESIL 155
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 157 WIRKLTGEPANTSGD-ADNLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINA 333
WI T N GD AD+ LK G +LCKL N +QPG++KKIN M F MENI
Sbjct: 73 WIEGKTS--CNFGGDTADDFQNTLKSGVVLCKLANAIQPGAIKKINNAKMNFMMMENIEN 130
Query: 334 FLEAVKKLGVPAQETFQTIDLWERQNLYSV 423
F V+ GV +Q F TIDL+E +N++ V
Sbjct: 131 FCNFVQTKGVASQYQFVTIDLFEGKNMHQV 160
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 64.5 bits (150), Expect = 8e-11
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Frame = +1
Query: 109 RIHSKYNDEIAQETLEWIRKLTGEPANTSGDADN------LYEVLKDGTLLCKLVNELQP 270
++ +KY E+ W+ + G+ + N E L+ G +LCK+ N+++
Sbjct: 265 QVDAKYPKELEGNARRWVETMYGDTVAWGEERPNQRPGETFAEPLRSGVILCKIANKIKS 324
Query: 271 GSVKKINQTTMAFKCMENINAFLEAVKK-LGVPAQETFQTIDLWERQNL 414
++ KI ++ +F ENI+ FL+ ++ LG+ FQT+DL+ERQN+
Sbjct: 325 NAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLNLFQTVDLFERQNV 373
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 85 GINAEAQARIHSKYNDEIAQETLEWIRKLTGE------PANTSGDADNLYEVLKDGTLLC 246
G+ AE +I SKY+ E+ + +W+ K+ GE S ++ + + DG +LC
Sbjct: 16 GLTAEVNRKIQSKYDTELEMQCRDWLEKMLGENIEWGVETEYSRPGESFADGIFDGIVLC 75
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 472 PSIGPKEAD-KNVRDFSEEQLKAGQ 543
P GPKE N R+F+EEQLKA +
Sbjct: 509 PLFGPKEGSGPNPREFTEEQLKAAK 533
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +1
Query: 316 MENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGRKAGNFGKPSIGPKEA 495
MENI FL + LGV + FQT+DL+E+QN+ + +A P +GPKEA
Sbjct: 18 MENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA---------RAKGLNCPQLGPKEA 68
Query: 496 DKNVRDFSEEQLKAGQNV 549
+ N R F E++L+AG+ +
Sbjct: 69 EANPRSFDEDKLRAGKGI 86
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Frame = +1
Query: 205 DNLYEVLKDGTLLCKLVNELQPGSVKKIN-------QTTMAFKCMENINAFLEAVKKLGV 363
D+L L DG +LC LVN G++ I+ + TM KCM+N++ FLEA KKLGV
Sbjct: 330 DDLPASLADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMT-KCMKNVDYFLEACKKLGV 388
Query: 364 PAQETFQTIDLWERQNLYSVVVCLQSLGRKAGN 462
+ + D+ + ++ V +Q+L +A N
Sbjct: 389 DRELLCSSADILQEKSPQRVCATVQALLDRADN 421
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 NELQPGSVKK--INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 429
N +QPG +KK +N M FK MENI F+ +K GV + F T+DL+E++N++ V
Sbjct: 189 NAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNVWGSFV 248
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 37.1 bits (82), Expect(2) = 2e-05
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 289 NQTTMAFKCMENINAFLEAVKK--LGVPAQETFQTIDLWERQNLYSVVVCLQSLGRK 453
N+ + + ENI FL A ++ Q+ FQT+ L+ERQNL V+ +Q+ RK
Sbjct: 889 NRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFARK 945
Score = 28.7 bits (61), Expect(2) = 2e-05
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 472 PSIGPKEADKNVRDFSEE 525
P GPKEA+KN R+F E+
Sbjct: 986 PLFGPKEAEKNPRNFPEQ 1003
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/92 (31%), Positives = 44/92 (47%)
Frame = +1
Query: 127 NDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQTTMA 306
+D E WI + T P D+ E L DG LLC+L+ + SV +IN+ A
Sbjct: 26 SDAALVEARRWIERATFTPFKN----DDFRESLADGVLLCELIVNVANISVGRINKQGTA 81
Query: 307 FKCMENINAFLEAVKKLGVPAQETFQTIDLWE 402
+N++ F A + LG+ + F+ DL E
Sbjct: 82 HAGRDNLSVFFRACEALGLDKYQLFEHEDLDE 113
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Frame = +1
Query: 16 EFSGYTSAHLLTSDMA-EYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGE---- 180
++ G LL+++M ++ G + +AE HSK +++A +WI E
Sbjct: 8 KYRGAIFKSLLSTNMGVKHSGGTSESSAEGTKHSHSK-EEQVA--FADWINSSLKEDESV 64
Query: 181 ----PANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM-AFKCMENINAFL 339
P + S D+ +LYE +KDG LLCK++N PG++ + IN+ + F EN +
Sbjct: 65 HKYLPIDASEDSSDLYEKVKDGILLCKMINLSAPGTIDERVINKPPLKVFTIHENQTLVI 124
Query: 340 EAVKKLG 360
+ +G
Sbjct: 125 NSALAIG 131
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 44.8 bits (101), Expect = 7e-05
Identities = 16/27 (59%), Positives = 26/27 (96%)
Frame = +1
Query: 472 PSIGPKEADKNVRDFSEEQLKAGQNVI 552
P++GPKEA+ NVR+F+EEQL+AG++++
Sbjct: 10 PTLGPKEAEANVREFTEEQLRAGESIL 36
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 223 LKDGTLLCKLVNELQPGSVKKINQTTM--AFKCMENINAFLEAVKKL-GVPAQETFQTID 393
L+DG LLC++ N L PG+V + F C++NI FL A +L + + F +
Sbjct: 55 LRDGVLLCQVANVLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLFDANE 114
Query: 394 LWERQNLYSVVVCLQSL 444
L++ + VV L L
Sbjct: 115 LYDVSDFGKVVNTLSKL 131
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 37.5 bits (83), Expect = 0.010
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Frame = +1
Query: 136 IAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKI--------- 288
+ ++ EW+ ++ ADN + L +G LLCKL +Q + + I
Sbjct: 37 LKEDLAEWLSRVL----EVEVQADNFMDYLDNGVLLCKLAQLIQKAATEWIKLDKAMSVT 92
Query: 289 ----------NQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQ 438
N + F +N FL+ K +G+ F++ L ++ V++CL
Sbjct: 93 LPSLGSRFHQNAKSGTFFARDNAAYFLKWCKGVGIQDSVMFESDGLVLQKQPREVLLCLL 152
Query: 439 SLGRKAGNFGKPSIGPKEADKNVRDFSEEQLK 534
+ R A NFG + +K + + E+++K
Sbjct: 153 DVARFAANFGIDPPNLVKLEKEIDEEIEQEVK 184
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 316 MENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSV 423
M I FL+ GV + FQT+DL+E+QN+ V
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 19 FSGYTSAHLLTSD--MAEYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGE 180
F T L+ D MA + G G+ AE ++ +KY+ + E ++WI K+ GE
Sbjct: 644 FQHLTKEDLVCKDTNMANRQKGY-GMTAELSRKMSAKYDPVMDAEAVDWIEKVLGE 698
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 32.7 bits (71), Expect = 0.30
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Frame = +1
Query: 136 IAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQ---------------- 267
+ ++ WI +L GE + D +L G +LC+L N +Q
Sbjct: 28 LKEDLASWISRLLGEEELNT---DTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRR 84
Query: 268 ---PG---SVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 429
P + K+ T +F +N++ F+ ++L VP F+T DL +N +V++
Sbjct: 85 GLFPACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLL 144
Query: 430 CLQSLGRKAGNFG 468
L + RKA G
Sbjct: 145 TLLEVARKAFKVG 157
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 32.3 bits (70), Expect = 0.39
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 34 SAHLLTSDMA-EYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADN 210
+A L D + +Y+ G+ +NA+A +RIH +Y + +A + E +T EP+ T +
Sbjct: 763 AAELANFDFSIKYKPGRHNVNADALSRIH-RYEETVAAISAE----VTYEPSTT-----H 812
Query: 211 LYEVLKDGTLLCKLV-NELQPGSVKKINQTTM 303
L E +++ + V ELQP + + TT+
Sbjct: 813 LPEEMREQLVTAAAVMTELQPHLLGEAQATTL 844
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 142 QETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQ 267
++ W+ KL E T D + L+DGTLLCKL N +Q
Sbjct: 673 EDETAWLAKLFTEIIITP---DFFFYALEDGTLLCKLANYIQ 711
>SB_47581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 349 KKLGVPAQETFQTIDLWERQNLYSVVVCLQS-LGRKAGNFGKPSIGP 486
KK+G + +DL ERQ L + ++ LGR G +G P + P
Sbjct: 42 KKMGTSCSDYVVRVDLPERQRLQEALDDVEGVLGRDVGGYGGPRLRP 88
>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
Length = 1552
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/111 (23%), Positives = 48/111 (43%)
Frame = +1
Query: 196 GDADNLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQE 375
GD D + + +KD + K + E ++ IN+ FK +E++ K P Q+
Sbjct: 673 GDLDMMVQYVKDVGSVQKKLGECTE-TIGYINEEEDLFKWERTEYPEVESITKAIEPYQK 731
Query: 376 TFQTIDLWERQNLYSVVVCLQSLGRKAGNFGKPSIGPKEADKNVRDFSEEQ 528
F T+ W+R + L +A + K+A + V+D +E+
Sbjct: 732 LFTTVMKWQRAEKKCMDGAFLELNAEAIEAEREK--EKKASRRVKDTKKEE 780
>SB_2354| Best HMM Match : GRP (HMM E-Value=3.9)
Length = 216
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -1
Query: 527 CSSEKSRTFLSASLGPMDGLPKLPAFLPRDCRQTTTE*RFCLSQRSMVW 381
C+ S TF SL P+D L +LP P C+Q TTE + C S W
Sbjct: 15 CAPPSSSTFTRPSL-PLD-LVRLPDCFPVQCQQITTEIQ-CRKTFSCSW 60
>SB_49814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 622 ITFDACCRRICPTAGPC*CRTVAISR-SDRLSAAPRRSRAHSCPPPWARWTACRSYLPSY 446
++FD C+R+C + IS +++LSA P PPP RW++ Y SY
Sbjct: 150 VSFDISCKRVCISCLNFAVNAQGISAVTNQLSANPGDPLVLERPPP--RWSSNSPYSESY 207
>SB_29188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 449 LPRDCRQTTTE*RFCLSQRSMVWKVS*AGTPSFLTASRKAFMFSIHLKAMVVWLIFLT 276
LP C++ C S R W VS +GT S T +R F +S + + LIF T
Sbjct: 321 LPAGCQEVCDNIGACTSGRITQWNVSVSGTTSLYTCAR-FFDYSSTVPNDLRLLIFAT 377
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 199 DADNLYEVLKDGTLLCKLVNELQPGSV 279
D +N +DG +C+LVN LQPG +
Sbjct: 445 DINNFDTDWRDGMAICELVNALQPGLI 471
>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 118 SKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLL 243
+KY+ + E ++WI K+ GE G + N +VLKDG +L
Sbjct: 3 AKYDPVMDAEAVDWIEKVLGEKV-CQGKSIN-EDVLKDGQIL 42
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 424 VVCLQSLGRKAGNFGKPSIGPKEADKNVRDFSEEQL 531
+V L SLG +FG P EA K DF E+Q+
Sbjct: 1485 LVFLDSLGAGVSSFGSSMTSPYEARKMCLDFLEKQM 1520
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 388 IDLWERQNLYSVVVCLQSLG 447
+ +W +N SVVVC+QSLG
Sbjct: 258 VSVWASENTSSVVVCVQSLG 277
>SB_56359| Best HMM Match : Bcl-2 (HMM E-Value=7e-30)
Length = 154
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +1
Query: 37 AHLLTSDMAEYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLY 216
AH L D+ YR G I+ AR + +DE+ + + + T+ A +
Sbjct: 17 AHFLAQDLISYRTGNGRISTSLTARNMRRLSDELEERHGPLLCNMCNSLNMTANSAHEKF 76
Query: 217 -----EVLKDG 234
EV KDG
Sbjct: 77 VQVADEVFKDG 87
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 226 KDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 354
K+ T L +L+N Q + K +++ +FK +EN N L ++ K
Sbjct: 93 KENTKLRELLNNAQEDAKKPVSENMESFKRIENENEHLRSLLK 135
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 226 KDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 354
K+ T L +L+N Q + K +++ +FK +EN N L ++ K
Sbjct: 3199 KENTKLRELLNNAQEDAKKPVSENMESFKRIENENEHLRSLLK 3241
>SB_38450| Best HMM Match : zf-CCHC (HMM E-Value=0.00018)
Length = 1066
Score = 28.7 bits (61), Expect = 4.8
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Frame = +3
Query: 162 QEIDRRTGQHLR*RRQPVRSLKRRHPPLQTSQRASTRFR*EDQPNDHGLQVYGEH----- 326
QEIDRR + R RR+ RS +R + S + EDQP+D + +
Sbjct: 177 QEIDRRRDELERERRELERSSEREILREELSAAQVIQRILEDQPHDQSARPLSDKIPREE 236
Query: 327 --KRFPRGSQEARRARSGDLPDH*SLGEAEPLLG 422
RFP S R S LP H + P G
Sbjct: 237 SAVRFPSDSPRQRSRNS--LPTHLYVNTTAPTTG 268
>SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 28.7 bits (61), Expect = 4.8
Identities = 29/128 (22%), Positives = 52/128 (40%)
Frame = +1
Query: 43 LLTSDMAEYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEV 222
LLT A+ K G + +SK + LE I L P D +L+E+
Sbjct: 452 LLTDGKAKPALLKIGNSVTLSVDENSKKLFRYKAKDLEKISILDIVPEEGQVDVTSLFEI 511
Query: 223 LKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWE 402
KL +QP + + Q+ +N+ ++A+K+ +T TI+L+
Sbjct: 512 RTHVNWSMKLARRIQPIEILERRQSNWKKLQTSVVNSMIDAIKR------KTSTTIELFP 565
Query: 403 RQNLYSVV 426
+ + + V
Sbjct: 566 NRKISTTV 573
>SB_34769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 232 GTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQN 411
G LCK QPGS+ ++ T+ F ++ A L +KK + I +W
Sbjct: 102 GGFLCKAAMSAQPGSI-AVSVFTLVFISLDRCCAILCPLKKAMKGSVLKISIIGIWLASV 160
Query: 412 LYSVVVCLQSLGRKAGN 462
+S V + + R+ N
Sbjct: 161 AFSAPVMIVTGVRETPN 177
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 10 HGEFSGYTSAHLLTSDMAEYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPAN 189
H +F +S+ LL+ + A NAE+ A +++ ++ I E E++ +L +
Sbjct: 247 HRKFGPMSSSELLSYALKPEHAA----NAESYATVNTYVSNHITHEGAEYLSELLYDGDG 302
Query: 190 TSGDAD 207
GD D
Sbjct: 303 VDGDGD 308
>SB_595| Best HMM Match : CH (HMM E-Value=0)
Length = 905
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 208 NLYEVLKDGTLLCKLVNELQPGSVK--KINQ 294
NLY L DG +L +L +++QPG V K+N+
Sbjct: 693 NLYLDLDDGMILFQLFDQVQPGIVNYDKVNK 723
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,320,022
Number of Sequences: 59808
Number of extensions: 496696
Number of successful extensions: 1646
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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