Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0044
(794 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8913| Best HMM Match : Linker_histone (HMM E-Value=0.61) 77 1e-14
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13) 42 8e-04
SB_1611| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_21069| Best HMM Match : KE2 (HMM E-Value=0.59) 40 0.002
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 31 0.81
SB_35021| Best HMM Match : DUF334 (HMM E-Value=1.2) 31 1.4
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 29 4.3
SB_21040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_56065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_925| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.62) 28 7.6
>SB_8913| Best HMM Match : Linker_histone (HMM E-Value=0.61)
Length = 297
Score = 77.4 bits (182), Expect = 1e-14
Identities = 41/98 (41%), Positives = 58/98 (59%)
Frame = +2
Query: 281 KYKNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDYKD 460
KY N IL I+ LR+RKSRPD RIC+ MLKC+ V+ KDT+ DL+ ++ + + +K
Sbjct: 7 KYMNWILECINLLRSRKSRPDLERICRTMLKCHGVEEKDTEDDLRALVQAGIVTRRSFKG 66
Query: 461 NVSYRNAAKWRKKSKNNTMSAAIATSERRIITSAIATL 574
+SYRN+A W N T A + R ++ AI L
Sbjct: 67 AISYRNSAGW-----NRTHGAGKVSRAGRWVSEAIRAL 99
>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
Length = 405
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 281 KYKNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDYKD 460
KY IL AI+ ++ +K RP +RI + Y + L RC++ + KV +K
Sbjct: 50 KYLLWILQAINKVKGQKQRPSEDRIIHVLETGYGLSRDIISEQLDRCVEAGKVLKVTFKG 109
Query: 461 NVSYRNAAK---WRKKSK 505
SY++ ++ W+K S+
Sbjct: 110 KNSYKDPSRMPGWKKPSE 127
>SB_1611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 287 KNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVD-YKDN 463
K++I ++ RKS+ ++ CK + KV+ + +K ++C + S KV+ K
Sbjct: 238 KSKIQTRKSKIQTRKSKVQTSK-CKIQTRKSKVETRKSKVQTRKCKVQTSKSKVETRKSK 296
Query: 464 VSYRNAAKWRKKSKNNTMSAAIATSERRIITS 559
+ R + +KSK T + I TS I TS
Sbjct: 297 IQTRKSKVQTRKSKVQTSKSKIQTSNSNIQTS 328
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 287 KNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDYKDNV 466
K++I ++ RKS+ + CK + KVQ +K ++C + KV +
Sbjct: 175 KSKIQTRKCEVQTRKSKIQTRK-CKVQTRKSKVQTSKSKIQTRKCKVQTGKCKVQTSKSK 233
Query: 467 SYRNAAKWR-KKSKNNTMSAAIATSERRIIT 556
+ + +K + +KSK T + + TS+ +I T
Sbjct: 234 IHASKSKIQTRKSKIQTRKSKVQTSKCKIQT 264
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 317 LRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVD-YKDNVSYRNAAKWR 493
++ RK + + R CK + KVQ + K ++C + KV K V R +
Sbjct: 52 VQTRKCK-EQTRKCKVQTRKCKVQTRKCKKQTRKCKVQTRKCKVQTCKSKVQTRKSKVLT 110
Query: 494 KKSKNNTMSAAIATSERRIIT 556
+KSK T + T + ++ T
Sbjct: 111 RKSKVQTRKCKVQTCKCKVQT 131
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 287 KNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDY-KDN 463
K+++ + RKS+ + CK KVQ + +K ++C + KV K
Sbjct: 98 KSKVQTRKSKVLTRKSKVQTRK-CKVQTCKCKVQTRKSKKQTRKCKVQTRKCKVQTCKSK 156
Query: 464 VSYRNAAKWRKKSKNNTMSAAIATSERRIIT 556
V R + +KSK T + I T + + T
Sbjct: 157 VQIRKSKVQTRKSKIETRKSKIQTRKCEVQT 187
>SB_21069| Best HMM Match : KE2 (HMM E-Value=0.59)
Length = 341
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 287 KNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVD-YKDN 463
K++I ++ RKS+ ++ CK + KV+ + +K ++C + S KV+ K
Sbjct: 238 KSKIQTRKSKIQTRKSKVQTSK-CKIQTRKSKVETRKSKVQTRKCKVQTSKSKVETRKSK 296
Query: 464 VSYRNAAKWRKKSKNNTMSAAIATSERRIITS 559
+ R + +KSK T + I TS I TS
Sbjct: 297 IQTRKSKVQTRKSKVQTSKSKIQTSNSNIQTS 328
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 287 KNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDYKDNV 466
K++I ++ RKS+ + CK + KVQ +K ++C + KV +
Sbjct: 175 KSKIQTRKCEVQTRKSKIQTRK-CKVQTRKSKVQTSKSKIQTRKCKVQTGKCKVQTSKSK 233
Query: 467 SYRNAAKWR-KKSKNNTMSAAIATSERRIIT 556
+ + +K + +KSK T + + TS+ +I T
Sbjct: 234 IHASKSKIQTRKSKIQTRKSKVQTSKCKIQT 264
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 317 LRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVD-YKDNVSYRNAAKWR 493
++ RK + + R CK + KVQ + K ++C + KV K V R +
Sbjct: 52 VQTRKCK-EQTRKCKVQTRKCKVQTRKCKKQTRKCKVQTRKCKVQTCKSKVQTRKSKVLT 110
Query: 494 KKSKNNTMSAAIATSERRIIT 556
+KSK T + T + ++ T
Sbjct: 111 RKSKVQTRKCKVQTCKCKVQT 131
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 287 KNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDY-KDN 463
K+++ + RKS+ + CK KVQ + +K ++C + KV K
Sbjct: 98 KSKVQTRKSKVLTRKSKVQTRK-CKVQTCKCKVQTRKSKKQTRKCKVQTRKCKVQTCKSK 156
Query: 464 VSYRNAAKWRKKSKNNTMSAAIATSERRIIT 556
V R + +KSK T + I T + + T
Sbjct: 157 VQIRKSKVQTRKSKIETRKSKIQTRKCEVQT 187
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 31.5 bits (68), Expect = 0.81
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Frame = +2
Query: 266 EMSEIKYKNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYK 445
EM YK +I A L+ +++ +A R + + ++ +D ++KR LK +
Sbjct: 240 EMQIFDYKKKIAEAETKLKQQQNLYEAVRSDRNLYSKNLIESQDEITEMKRKLKIMNHQI 299
Query: 446 VDYKDNVSYRNAAKWRKKSKNNTMSA---AIATSERRIITSAIATLIYQDQSYLENGIAF 616
K+ ++ + A ++ ++ + A+ +R+ A + Y +Q E
Sbjct: 300 DQLKEEITAKEATLVKEHLEHQRVEKEKDALKAELQRMKQQAAESKAYIEQQEAEERKLL 359
Query: 617 DDLIKAASDQESKYSKKQLENIVNKELSSGSLVKLPNGNLAL 742
+ +A D E KK+L+ ++ + G+ + N LAL
Sbjct: 360 KIISEA--DAERMRQKKELDQVIGERDILGTQLVRRNDELAL 399
>SB_35021| Best HMM Match : DUF334 (HMM E-Value=1.2)
Length = 371
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 341 DANRICKFMLKCYKVQPKDTKADLKRCLKE-KSIYKVDYKD 460
D R M KC K++ KD + D+KR LK K+ KD
Sbjct: 81 DKKRALMTMKKCAKIKQKDIENDMKRALKTMNKCAKIKQKD 121
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 341 DANRICKFMLKCYKVQPKDTKADLKRCL 424
D R K M KC K++ KD + D+KR L
Sbjct: 103 DMKRALKTMNKCAKIKQKDIENDMKRAL 130
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Frame = +2
Query: 341 DANRICKFMLKCYKVQPKDTKADLKRCL---------KEKSIYKVDYKDNVSYRNAAKWR 493
D R M KC K++ KD + D+KR L K+K I + ++ AK +
Sbjct: 15 DKKRALMTMNKCAKIKQKDIENDMKRALMTMNKCAKIKQKDIENDKKRALMTMNKCAKIK 74
Query: 494 KKSKNNTMSAAIATSER 544
+K N A+ T ++
Sbjct: 75 QKDIENDKKRALMTMKK 91
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 398 TKADLKRCLKEKSIYKVDYKDNVSYRNAAKWRKKS--KNNTMS 520
+K K C+KE+++ KV K + A+K R+KS K T+S
Sbjct: 242 SKVREKSCIKEETVSKVREKSCIKQETASKVREKSCIKEETVS 284
>SB_21040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 638 SDQESKYSKKQLENIVNKELSSGSLVKLPNGNLALGPADHDVDSSDSFRFES 793
S+Q+ K+S K +ENIV K + S K G AL D ++SD F+S
Sbjct: 41 SEQKQKFSTKTVENIV-KHGEATSTEKATRGVAALEECDGQ-EASDEDEFKS 90
>SB_56065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +2
Query: 371 KCYKVQPKDTKADLKRCLKEKSIYKVDYKDNVSYRNAAKWRK 496
K + V+P+ ++ C ++S V YK + + + WR+
Sbjct: 411 KVHMVRPRKRSSESSECASQRSAKAVSYKQFLHVKGDSSWRE 452
>SB_925| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.62)
Length = 180
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 527 IATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNK 691
IA+S RR++ S + +I L I I + +ESK +KQ+ IV K
Sbjct: 78 IASSMRRLLDSGVVAVIPNLVVKLYAAINISAYISKKAREESKKKRKQMAVIVGK 132
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,735,700
Number of Sequences: 59808
Number of extensions: 401566
Number of successful extensions: 986
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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