Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0075
(473 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 0.37
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 31 0.65
SB_47491| Best HMM Match : Acyl-CoA_dh_N (HMM E-Value=0.36) 30 0.85
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 30 0.85
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 30 0.85
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 30 0.85
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_23562| Best HMM Match : DUF288 (HMM E-Value=1.1) 29 1.5
SB_50954| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_602| Best HMM Match : TSP_1 (HMM E-Value=1e-27) 29 2.6
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 28 3.4
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 28 3.4
SB_21494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2) 28 4.5
SB_8393| Best HMM Match : DUF662 (HMM E-Value=3.9e-26) 28 4.5
SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_58221| Best HMM Match : TBC (HMM E-Value=2.9e-08) 28 4.5
SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 27 6.0
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 27 6.0
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 7.9
SB_8891| Best HMM Match : Zot (HMM E-Value=2.5) 27 7.9
SB_5351| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_36416| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 27 7.9
SB_27818| Best HMM Match : Ion_trans_2 (HMM E-Value=2.5e-33) 27 7.9
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -2
Query: 319 AFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 158
A HQ ++SK + L E + +RD +L +EKE AS++++ LE+ A +K
Sbjct: 696 AHHQQKISKLNSCLEEAVSDMNSLRD-ELNKEKEAASSMKM-TLEKKAKEALEK 747
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 30.7 bits (66), Expect = 0.65
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -2
Query: 328 LYGAFHQNRLSKKEAKLR-EIEAQEKVIRDAKLKEEKERASAL 203
L F + +S+K+ +L E++AQEK ++ KLK EKE+++ L
Sbjct: 76 LVAKFQEEAVSEKQNRLSAELQAQEK-LQIEKLKSEKEKSAQL 117
>SB_47491| Best HMM Match : Acyl-CoA_dh_N (HMM E-Value=0.36)
Length = 431
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 301 LSKKEAKLREIEAQEKVIRDAKLKEE-KERASALEIKALEEM 179
L+ +E + R I+ QE + AKLKEE +ER +K LE++
Sbjct: 106 LTPEELEQRRIKRQEAAAKRAKLKEEAEERREQERMKKLEKL 147
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 30.3 bits (65), Expect = 0.85
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -2
Query: 310 QNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALE-EMASGTAKK 158
++R +K+ ++ E + +E+ ++ K KEEKER E +A E E A AK+
Sbjct: 747 KDRKERKKIEMEEAKKREQEEKERKEKEEKERIEREEREAKEREYAERIAKQ 798
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 30.3 bits (65), Expect = 0.85
Identities = 12/43 (27%), Positives = 28/43 (65%)
Frame = -2
Query: 310 QNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEE 182
Q + ++E ++RE E ++K +++ ++++ +E A +ALEE
Sbjct: 176 QEQQEEEERRIREEEERQKALKEERMRKLQEEARLAAQRALEE 218
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 280 LREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDK 146
LR+ E +EK +AK +EKER A + K E + K+ K+K
Sbjct: 322 LRQKEEKEKQRLEAKAAKEKERLEAKQKKEQERLEKQAEKEKKEK 366
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Frame = -2
Query: 298 SKKEAKLREIEAQEKVIRDAK---LKEEKERASALEI--KALEEMASGTAKK 158
+++E + RE++A+E+ +R A+ ++EE+ER LE+ K +EE A K
Sbjct: 959 AEQERRERELKAREEKLRLAREQMMREERERTLKLELERKRMEERLKDQASK 1010
>SB_23562| Best HMM Match : DUF288 (HMM E-Value=1.1)
Length = 411
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 306 FWWKAPYRTPTVRK--DQRPNLIRG-DIRTG 389
+WW++PY P R+ +Q NL G D+ TG
Sbjct: 246 YWWRSPYGLPNCRRAYEQLSNLTLGHDLSTG 276
>SB_50954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 299 IKERSETTRD*SPREGHPRCQAEGGERKS 213
+K R+ T SPR G CQ EG E KS
Sbjct: 378 VKSRNRTCTRPSPRYGGADCQGEGDEIKS 406
>SB_602| Best HMM Match : TSP_1 (HMM E-Value=1e-27)
Length = 590
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 299 IKERSETTRD*SPREGHPRCQAEGGERKS 213
+K R+ T SPR G CQ EG E KS
Sbjct: 229 VKSRNRTCTRPSPRYGGADCQGEGDEIKS 257
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRD---AKLKEEKERASALEIKALEEMASGTAK 161
+K+ K++ +E QEK +RD LKE KER LE + L + K
Sbjct: 309 EKQKKIK-LEQQEKELRDKLLKNLKEMKERKQELERELLRKQIKNKVK 355
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -2
Query: 310 QNRLSKKEAKLREIE---AQEKVIRDAKLKEEKERASALEI-KALEEM 179
Q + KK++KL+EIE A+E KLKE ERAS LE K + E+
Sbjct: 182 QRTIEKKDSKLQEIETILAEEITPTLKKLKE--ERASYLEYQKVMREL 227
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 313 HQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEM 179
HQ+ + +L E E QE+ R + +EE++R +A E L+E+
Sbjct: 556 HQDVEDDETKRLEEEERQEEEQRRQQEEEERQRIAAEEAARLQEL 600
>SB_21494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 352 WSFLTVGV--LYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEM 179
W+FL V + L G L+KK KLR E EK+ K +EE R + L +
Sbjct: 96 WAFLRVLMVELTGFIDLQVLNKKYNKLRVTEFTEKLYNSFKSREEDMRNATKTALLLRKF 155
Query: 178 AS 173
A+
Sbjct: 156 AT 157
>SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2)
Length = 497
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -2
Query: 310 QNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIV 140
QN S+K R+++ V + A +++EK R + + +E + T K KD+IV
Sbjct: 153 QNEASEKSGDARQVK--RSVDKKASVRDEKNRHDEDKKQTEKEEGADTNKAPKDRIV 207
>SB_8393| Best HMM Match : DUF662 (HMM E-Value=3.9e-26)
Length = 319
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/43 (25%), Positives = 28/43 (65%)
Frame = -2
Query: 307 NRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEM 179
+++ +++ E+E Q+++ + ++ E ER A+E+ ALE++
Sbjct: 100 SKIQEEKPSSVELEEQKQMDTEPEMITEPERIQAIELSALEKL 142
>SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 307 NRLSKKEAKLREIEAQEKVIRDAKLKEEKER 215
NR+ K+EA E + K +R AK KE+K+R
Sbjct: 162 NRVEKREALKTRFEIERK-LRQAKKKEKKKR 191
>SB_58221| Best HMM Match : TBC (HMM E-Value=2.9e-08)
Length = 580
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 379 ISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALE 200
ISP ++ W FL YG ++R + AK E + + + K+EK A E
Sbjct: 194 ISPSLRGDVWRFLLGYYKYGCTFESRKTLCRAKEDEYQTMKMQWQTISAKQEKRFAEFRE 253
Query: 199 IKAL 188
K L
Sbjct: 254 RKQL 257
>SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -2
Query: 343 LTVGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTA 164
+ V + G + + K ++L+ I V+R A K KE++S L+ E AS T+
Sbjct: 313 MVVDEITGTQNTASSAAKLSRLKTIVNYSSVVRSAPAKGGKEKSSLLDSLRSESFASPTS 372
Query: 163 KK 158
++
Sbjct: 373 EE 374
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 310 QNRLSKKEAKLR-EIEAQEKVIRDAKLKEEKERASALEIKALEE 182
QNR ++++K+ + EK+ RD+K KEE+ER + E L E
Sbjct: 201 QNRTIEEKSKIAFDKWMSEKLKRDSKKKEEEERKAREEKDKLIE 244
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = -2
Query: 337 VGVLYGAFHQNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 158
+G+L ++ + EA+ + I+ EK +AK +EE+ER E K E A+ A+K
Sbjct: 295 IGMLKVLLNKGMTAVAEAEQKGIK--EKAETEAKKQEEEERKRDEEKKKAER-AAAEARK 351
Query: 157 *KDK 146
K+K
Sbjct: 352 KKEK 355
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKER 215
KKE + + EA+EK +++ +++ EKER
Sbjct: 346 KKEEEKKRKEAEEKRVKEEQIRLEKER 372
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/58 (22%), Positives = 35/58 (60%)
Frame = -2
Query: 310 QNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 137
+ + ++A+L+E++ +EK+ ++ + K+++ER E K ++ K+ + K++I
Sbjct: 888 KEKKDNEKARLKEMKDKEKIEKEKREKDKREREEK-ERKRRQQQLEKEKKEKEKKLLI 944
>SB_8891| Best HMM Match : Zot (HMM E-Value=2.5)
Length = 392
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 298 SKKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 158
+KK + L E+E + RD + K+R SA E++ E+ GTA++
Sbjct: 270 TKKFSNLGEVEKDGRQGRDVTHDDVKQRMSAEEVRKYEK-RYGTARQ 315
>SB_5351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 310 QNRLSKKEAKLREIEAQEKVIRDAKLKEEKERASALEI-KALEEMASGTAKK 158
+NR + +E + ++ E QEK+ R+ +L+E++ +++ K EE +K
Sbjct: 416 ENRKTVEEKERKKKEEQEKIKREEELEEQRLEEQRIKMQKEFEEEQEKARRK 467
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 304 RLSKKEAKLREIEAQEKVIRDAKLKEEKERASAL 203
+L EAKL+E+E QEK D KL E + R L
Sbjct: 100 KLLDLEAKLKEVERQEKETLD-KLHEAQRREVVL 132
>SB_36416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 447 IIVLQYSNFITKCQIYHTEHLCVYRL*SSLDVG 349
++++ Y ITKC + H E L V SSL +G
Sbjct: 15 LVLVMYWYMITKCLVRHAEDLGVQPTKSSLLIG 47
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -2
Query: 295 KKEAKLREIEAQEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 158
KK+ RE+E QEK ++EKE + LE K LEE + K+
Sbjct: 1209 KKQRLKREMERQEKE------RKEKEMQALLEEKRLEEEKNAKRKR 1248
>SB_27818| Best HMM Match : Ion_trans_2 (HMM E-Value=2.5e-33)
Length = 352
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 404 FTIRSTCAYIASNQVWTLVLPHRRSSIRRLPPEQAIKERSETTRD*SP 261
F I + V TL + RR+S+ RLPP + ERS+ SP
Sbjct: 303 FPIDEPSLLLKDKSVDTLYI--RRNSLVRLPPIRCANERSDVEHSQSP 348
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,451,152
Number of Sequences: 59808
Number of extensions: 234808
Number of successful extensions: 693
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -