Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0157
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07) 36 0.046
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 33 0.33
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 31 0.76
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 1.3
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 31 1.3
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 30 1.7
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 30 2.3
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 29 3.0
SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 29 3.0
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 29 4.0
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 29 4.0
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 29 5.3
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_50769| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_14526| Best HMM Match : Drf_FH1 (HMM E-Value=0.16) 28 7.0
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_24750| Best HMM Match : Rad10 (HMM E-Value=5.1) 28 7.0
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 28 9.3
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 28 9.3
SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055) 28 9.3
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 28 9.3
>SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
N +SP + + +S NSP + + P SP P SP++P S + ++P SP T +
Sbjct: 51 NSPNSTNSPNSPNSPNSP-NSPNSPNSPNSPNSPNSPNSPNSINSPNSPNSPNSTNSPNS 109
Query: 489 VPNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
PNS N ++ + P SP+S
Sbjct: 110 -PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 145
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPV 491
N +SP +++ +S NSP + P SP P SP++P S + ++P SP T +
Sbjct: 6 NSPNSPNSPNSINSPNSP-NSPNS--PNSPNSPNSPNSPNSPNSPNSPNSPNSTNSPNS- 61
Query: 492 PNSMN 506
PNS N
Sbjct: 62 PNSPN 66
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPENS-MPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
N +SP +++ +S NSP ++ P SP P SP++P S + ++P SP +
Sbjct: 81 NSPNSPNSPNSINSPNSP-NSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 139
Query: 489 VPNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
PNS N ++ + P SP+S
Sbjct: 140 -PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 175
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQY 482
++N +SP + + +S NSP + + P SP P SP++P S + ++P SP
Sbjct: 103 STNSPNSPNSPNSPNSPNSP-NSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSP 161
Query: 483 SPVPNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
+ PNS N ++ + P SP+S
Sbjct: 162 NS-PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 199
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
N +SP + + +S NSP + + P SP P SP++P S + ++P SP +
Sbjct: 195 NSPNSPNSPNSPNSPNSP-NSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 253
Query: 489 VPNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDSQSQ 608
PNS N ++ +RP P S Q
Sbjct: 254 -PNSPNSPNSPNSPNSPNSPNSTNSTNSPNRPNRPSSFKQ 292
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPENS-MPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
N +SP + + +S NSP ++ P SP P SP++P S + ++P SP +
Sbjct: 33 NSPNSPNSPNSPNSPNSP-NSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 91
Query: 489 V--PNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
+ PNS N ++ + P SP+S
Sbjct: 92 INSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNS 130
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
N +SP + + +S NSP + + P SP P SP++P S + ++P SP +
Sbjct: 150 NSPNSPNSPNSPNSPNSP-NSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 208
Query: 489 VPNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
PNS N ++ + P SP+S
Sbjct: 209 -PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 244
Score = 36.3 bits (80), Expect = 0.027
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
+SP + + +S INSP + P SP P SP++P S + ++P SP PNS N
Sbjct: 6 NSPNSPNSPNS-INSPNS--PNSPNSPNSPNSPNSPNSPNSPNSPNSPNS----PNSTNS 58
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
++ + P SP+S
Sbjct: 59 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 88
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
N +SP + + +S NSP + + P SP P SP++ S + ++P SP +
Sbjct: 18 NSPNSPNSPNSPNSPNSP-NSPNSPNSPNSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNS 76
Query: 489 VPNSMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDS 599
PNS N ++ + P SP+S
Sbjct: 77 -PNSPNSPNSPNSPNSINSPNSPNSPNSTNSPNSPNS 112
>SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07)
Length = 487
Score = 35.5 bits (78), Expect = 0.046
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
AS+P +G N+P + PG GP +P+TP + GS P +TQ SP
Sbjct: 286 ASTPSPAAGYAP--NTPNPATPGGYGGPYTPNTPGPAMYGSEPTYSPYTQSPSP 337
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 35.1 bits (77), Expect = 0.061
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
S+P S H+ S P +P P +PSTP + S P +P+ T S P++
Sbjct: 444 STPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPS-TPSTSSTPST 499
Score = 34.7 bits (76), Expect = 0.081
Identities = 22/92 (23%), Positives = 34/92 (36%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S H+ S P +P P P+TP + S P +P T P++ +
Sbjct: 668 STPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPSTPSTPSTPSTP-ITPGTPSTPSTPSA 726
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
TRS P++P + S
Sbjct: 727 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPS 758
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/96 (22%), Positives = 35/96 (36%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPN 497
H S+P S + S P +P P +PSTP + S P +P+ T P+
Sbjct: 63 HSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPS-TPSTPSTPS 121
Query: 498 SMNEXXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
+ + T S P++P + S
Sbjct: 122 TPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPS 157
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/92 (23%), Positives = 34/92 (36%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + S P +P P +PSTP + S P +P T P++ +
Sbjct: 118 STPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTP-ITPGTPSTPSTPSA 176
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
TRS P++P + S
Sbjct: 177 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPS 208
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/92 (23%), Positives = 34/92 (36%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + S P +P P +PSTP +S S P +P+ T P + +
Sbjct: 459 STPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPS-TPSAPGTPGTPST 517
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P + S
Sbjct: 518 PSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPS 549
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+PG S + S P +P P PSTP + S P +P+
Sbjct: 522 SAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPS 567
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
S+P S + I S P +P P PSTP + S P +P
Sbjct: 229 STPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTP 273
Score = 31.9 bits (69), Expect = 0.57
Identities = 21/92 (22%), Positives = 32/92 (34%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + S P +P P +PSTP + S P +P+ T P +
Sbjct: 456 STPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPS-TPSTPSAPGTPGT 514
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P + S
Sbjct: 515 PSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPS 546
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
S+P S + I S P +P P PSTP + S P +P
Sbjct: 779 STPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTP 823
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
T N S+P +M S ++P S P +P P +PSTP + S P +P+
Sbjct: 275 TPNTPSTPSTP-SMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPS 328
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
T N S+P +M S ++P S P +P P +PSTP + S P +P+
Sbjct: 825 TPNTPSTPSTP-SMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPS 878
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTP + + S P +P+
Sbjct: 250 STPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPS 295
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTP + + S P +P+
Sbjct: 800 STPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPS 845
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTPK+ P +P+
Sbjct: 292 STPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTPS 337
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
TS+ S+P S + S P +P P +PSTP + S P +P+
Sbjct: 493 TSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPS 546
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/88 (23%), Positives = 31/88 (35%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + S P +P P +PSTP + S P +P+ T P+ N
Sbjct: 641 STPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPS-TPSTPSTPSMPNT 699
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASP 593
T S P++P
Sbjct: 700 PSTPSTPSTPSTPITPGTPSTPSTPSAP 727
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTPK+ P +P+
Sbjct: 842 STPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTPS 887
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/92 (22%), Positives = 35/92 (38%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + S P +P+ P +PSTP + S P +P+ T P++ +
Sbjct: 28 STPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPS-TPSTPCTPSTPST 86
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P + S
Sbjct: 87 PSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPS 118
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 321 RGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
R S + S ++ P SMP +P P +PSTP + P +P+
Sbjct: 198 RSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPS 247
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTP + S P +P+
Sbjct: 262 STPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPS 307
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/92 (21%), Positives = 35/92 (38%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + S P +P+ P++PSTP + P +P+ T P++ +
Sbjct: 393 STPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPS-TPSTPSTPSTPSL 451
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P + S
Sbjct: 452 THTPSTPSTPSTPSTPSTPSTPSTPSTPSTPS 483
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTP S P +P+
Sbjct: 516 STPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPS 561
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 321 RGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
R S + S ++ P SMP +P P +PSTP + P +P+
Sbjct: 748 RSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPS 797
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTP + S P +P+
Sbjct: 812 STPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPS 857
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/92 (22%), Positives = 33/92 (35%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P +S + S P +P P +PSTP + S P +P T P+ +
Sbjct: 232 STPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPN-TPSTPSTPSMPST 290
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P + S
Sbjct: 291 PSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPS 322
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/92 (22%), Positives = 33/92 (35%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P +S + S P +P P +PSTP + S P +P T P+ +
Sbjct: 782 STPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPN-TPSTPSTPSMPST 840
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P + S
Sbjct: 841 PSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPS 872
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+PG G S ++P P +P P +PSTP + S P P+
Sbjct: 507 SAPGT-PGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPS 552
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
+PG S + S P +P P +PSTP + S P +P+
Sbjct: 511 TPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPS 555
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 384 SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S P +P P++PSTP + S P +P+
Sbjct: 22 STPSTPSTPRTPSTPSTPCTPSTPSTPS 49
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 384 SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S P +P P++PSTP + S P +P+
Sbjct: 387 STPSTPSTPRTPSTPSTPCTPSTPSTPS 414
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
S+P S + S P +P P +PSTP + S P +P
Sbjct: 289 STPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTP 333
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 363 DINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
DI + S P +P P +PSTP + S P +P
Sbjct: 371 DIITSTPSTPCTPSTPSTPSTPSTPRTPSTPSTP 404
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+P S + S P +P P +PSTP + + P +P+
Sbjct: 638 STPSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPS 683
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
S+P S + S P +P P +PSTP + S P +P
Sbjct: 839 STPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTP 883
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 384 SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S P +P P +PSTP + P +P+
Sbjct: 10 STPSTPCTPSTPSTPSTPSTPRTPSTPS 37
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSDVGSNPGSPT 467
P +P P +PSTP++ S P +P+
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPS 43
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/92 (22%), Positives = 33/92 (35%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + I S P +P P + STP + S P + + S +PN+ +
Sbjct: 169 STPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPS-MPNTPST 227
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P S
Sbjct: 228 PSTPSTPSTLSTPITPSTPSTPSTPSTPSMPS 259
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
S P S + S P +P P +PSTP + P +P
Sbjct: 286 SMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTP 330
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 384 SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S P +P P +PSTP + P +P+
Sbjct: 375 STPSTPCTPSTPSTPSTPSTPRTPSTPS 402
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSDVGSNPGSPT 467
P +P P +PSTP++ S P +P+
Sbjct: 383 PSTPSTPSTPSTPRTPSTPSTPCTPS 408
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/92 (22%), Positives = 33/92 (35%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
S+P S + I S P +P P + STP + S P + + S +PN+ +
Sbjct: 719 STPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPS-MPNTPST 777
Query: 510 XXXXXXXXXXXXXXXXXXXDTRSRPASPDSQS 605
T S P++P S
Sbjct: 778 PSTPSTPSTLSTPITPSTPSTPSTPSTPSMPS 809
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
S P S + S P +P P +PSTP + P +P
Sbjct: 836 SMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTP 880
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMN 506
S+P S + S P +P PK+PSTP + + S T + N +N
Sbjct: 848 STPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTPSTNRKSTSLGMQENIANFLN 906
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G + P +G D + + P P GPK P+ PK + P PT
Sbjct: 190 GPAGPAGPTGPKGDTGATGPTDPTGPTGPKGPTGPKGEIGATGPTDPT 237
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPK------SPSTPKSSDVGSNPGSPT 467
GA+ P + +G D + + P P GPK P+ PK + P PT
Sbjct: 229 GATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPT 282
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G + P +GA ++ P GP P+ PK + P PT
Sbjct: 253 GPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGPT 300
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSDVGSNPGS--PTFTQQYSPVPN 497
P P+ PKS S P + VGS P S P+ + + SP P+
Sbjct: 520 PEKPVSPKSQSRPSTPKVGSRPSSRPPSGSPRQSPQPS 557
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPL-GLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
+ G+ G D + G P D +D + G G G + G+ G PG + + GV
Sbjct: 800 DPGNPGTDGLPGAPGRDGIDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGV 859
Query: 421 LGDLGPKGDPG 389
GD GP G+PG
Sbjct: 860 KGDTGPSGEPG 870
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG+ P D G G GP G PG + + + + PG++ P+ G KGD
Sbjct: 508 GLPGIGPPGPD-GDRGPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQ-----GFKGDPG 561
Query: 283 *LSGEGECG-PHEPPDRGE*G 224
GE G P P +G G
Sbjct: 562 PPGPPGEVGVPGAPGMKGPIG 582
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
G+ + GN S P + GSP P +P TP+ + +PG P
Sbjct: 773 GSRTSGNPHMGSSPAPIPSPTSTGSPQTPLTPHTPRFPNTAPSPGEP 819
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 324 GASSPGNMSG--AHSDINSPENSM-PGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S P S HSD +P + P P GP P+ P S+P +P+
Sbjct: 303 GQSDPTGRSDPTVHSDPTAPSDPTGPSDPTGPSDPTGPSDPTAPSDPTAPS 353
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
+ P + +G S + + P P GP P+ P S+P +PT
Sbjct: 155 TGPSDPTGPSDPTVSSDPTGPSDPTGPSDPTAPSDPTGPSDPTAPT 200
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 324 GASSPGNMSG--AHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S P S A SD +P + ++P P GP P+ P S+P +P+
Sbjct: 333 GPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGPSDPTGPSDPTAPSDPTAPS 383
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 360 SDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
SD P + + P P GP P+ P V S+P P+
Sbjct: 515 SDPTGPSDPTAPSDPTGPSDPTAPSDPTVSSDPTGPS 551
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 354 AHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
A SD +P + ++P P GP P+ P S+P P+
Sbjct: 243 APSDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDPTGPS 281
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 360 SDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
SD +P + + P P GP PS P S + P PT
Sbjct: 71 SDPTAPSDPTAPSDPTGPTGPSDPTLSSDPTGPSDPT 107
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPTF-TQQYSPVPNS 500
+ P + +G SD +P + ++P P GP P+ P S+P P+ T Q P S
Sbjct: 422 TGPSDPTGP-SDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGRS 479
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 354 AHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
A SD P + P +P GP P+ P V S+P P+
Sbjct: 141 APSDPTGPSD--PTAPTGPSDPTGPSDPTVSSDPTGPS 176
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S P +G + + P P GP P+ P S+P P+
Sbjct: 192 GPSDPTAPTGPSDPTGPSDPTGPSDPTGPSDPTGPSDPTAPSDPTGPS 239
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +3
Query: 318 HRGASSPGNMSG-----AHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
H ++P + +G A SD P + ++P P GP P+ P S+P +P+
Sbjct: 484 HSDPTAPSDPTGPSDPTAPSDPTGPNDPTVPSDPTGPSDPTAPSDPTGPSDPTAPS 539
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSP 464
++P + +G SD +P + ++ P GP P+ P V S+P P
Sbjct: 524 TAPSDPTGP-SDPTAPSDPTVSSDPTGPSDPTAPSDPTVSSDPTGP 568
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S P +G S + + P P GP +PS P + P PT
Sbjct: 83 SDPTGPTGPSDPTLSSDPTGPSDPTGPTAPSDPTGPSDPTVPSDPT 128
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 336 PGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
P + +G SD +P + + P P GP P+ P + P PT
Sbjct: 124 PSDPTG-QSDPTAPSDPTAPSDPTGPSDPTAPTGPSDPTGPSDPT 167
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
+ P + +G + + P P GP P+ P S+P P+
Sbjct: 212 TGPSDPTGPSDPTGPSDPTAPSDPTGPSDPTAPSDPTAPSDPTVPS 257
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 324 GASSPGNMSG--AHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S P S A SD +P + ++P P G P+ P V S+P +P+
Sbjct: 363 GPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGPSDPTVHSDPTAPS 413
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSDVGSNPGSPT 467
P P GP P+ P V S+P +P+
Sbjct: 10 PSDPTGPSDPTVPSDPTVPSDPTAPS 35
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 309 SNQHRGASSPGNMSGAHSDINSPEN-SMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
S+ G S P + A SD P + ++P P G P+ P S+P P+
Sbjct: 97 SSDPTGPSDPTGPT-APSDPTGPSDPTVPSDPTGQSDPTAPSDPTAPSDPTGPS 149
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
+ P + +G + + P P GP P+ P S+P +P+
Sbjct: 200 TGPSDPTGPSDPTGPSDPTGPSDPTGPSDPTAPSDPTGPSDPTAPS 245
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -3
Query: 595 SGDAGRDLVSGEP--VGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
+G G ++G P +GD V P GL G GP GL G G T+ LG
Sbjct: 346 NGQPGPPGINGPPGPLGD-VGPPGLPGPPGPQMPPGPPGLPG--APGPKGPPGTNGPLGP 402
Query: 421 LGDLGPKGDPG 389
GD+GP G+PG
Sbjct: 403 PGDVGPPGNPG 413
Score = 28.3 bits (60), Expect = 7.0
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = -3
Query: 559 PVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGDLGPKGDPG 389
P GD + P GL G GP GL G G T+ LG GD+GP G+PG
Sbjct: 190 PPGD-MGPPGLPGPQGPQMPPGPPGLPG--APGPKGPPGTNGPLGPPGDVGPPGNPG 243
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = -3
Query: 559 PVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGDLGPKGDPG 389
P GD + P GL G GP GL G G T+ LG GD+GP G+PG
Sbjct: 275 PPGD-MGPPGLPGPPGPQMPPGPPGLPG--APGPKGPPGTNGPLGPPGDVGPPGNPG 328
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVP 494
SP N S S NSP S SP + S P SS VGS SP+ ++ P P
Sbjct: 335 SPSN-SPRPSPKNSPRTSPRSSPFASPTGS-PTSSPVGSPAQSPSVFRRIPPPP 386
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 312 NQHRGAS-SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKS-SDVGSNPGSPTFTQQYS 485
+ H G+S PG+ A S +N+P N+ P S + P+S + ++P +Q+ +
Sbjct: 229 SSHSGSSPQPGS---AFSPVNTPPNAQAQQMTPPSSAAPPQSLPGLQTSPSLQPPSQRST 285
Query: 486 PVPNSMN 506
P P SM+
Sbjct: 286 PSPQSMS 292
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 372 SPENSM-PGSPLGPKSPSTPKSSDVGSNPGSP--TFTQQYSPVPNS 500
+PE +M PG+ L P + TPKS++V +P T T + + VP S
Sbjct: 1954 APETTMVPGTTLEPGTTITPKSTEVPPTTMTPESTVTPETTMVPES 1999
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMN 506
P N S N N P +P P+ P S+ +NP S S P S N
Sbjct: 529 PNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPASNPKPNNPSSNPKSNN 585
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPST-PKSSDVGSNPGSPTFTQQYSPVPNS 500
P N + ++P+ + P S P +PS+ PKS+ SNP S +P PN+
Sbjct: 610 PNNPXXXXNPSSNPKPNNPSSNPKPNNPSSNPKSNSPASNPKSN--NPSSNPKPNN 663
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 394 PNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 435
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 457 PNNPSSNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPAS 498
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS--PVPNS 500
P N S N N P +P P+ P S+ +NP S + S P PN+
Sbjct: 538 PNNPSSNPKPNNPASNPKPNNPSSNPKPNNPASNPKPNNPSSNPKSNNPSSNPKPNN 594
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 309 SNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPST-PKSSDVGSNP 455
SN P N S N N P +P +PS+ PK ++ SNP
Sbjct: 583 SNNPSSNPKPNNPSSNPRPNNPSSNPKPNNPXXXXNPSSNPKPNNPSSNP 632
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 679 PNNPSSNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPAS 720
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSG 374
G+PGL D G+LG +GP G G+ G
Sbjct: 536 GNPGLPGQKGDKGLLGPIGPPGRGGVGSQG 565
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 457 PGLEPTSLDLGVLGDLGPKGDPGIE-FSG--ELISE*APLMFPGE 332
PG + DLG G GPKG PG FSG L + PL PG+
Sbjct: 299 PGESGAAGDLGPDGPPGPKGAPGAPGFSGIEGLKGQSGPLGDPGD 343
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 375 PENSMPGSPLGPKSPSTPK-SSDVGSNPGSPTFTQQYSPV 491
P + SPLGP +PS P + P PT + P+
Sbjct: 22 PHRPIAPSPLGPTTPSPPSHHGPISLRPHRPTIPSPHDPI 61
>SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMN 506
P N S N N P +P P+ P S+ +NP S S P S N
Sbjct: 154 PNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKSNN 210
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 199 PNNPSSNPKSNNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSS 240
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS--PVPNS 500
P N S N N P +P P+ P S+ +NP S + S P PN+
Sbjct: 163 PNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSSNPKPNN 219
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 10 PNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 51
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 37 PNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPAS 78
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 315 QHRGASSPGNMSGAHSDIN--SPENSM-PGSPLGPKSPSTPKSSDVGSN 452
Q +G SS +S + S+ N S +S+ GSPL P+ P++PK S N
Sbjct: 825 QRQGNSSVHKVSVSPSESNPASARSSVHAGSPLSPRPPTSPKPSQCTLN 873
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR---C*LDVGCKG 293
GDPG + + G G LG +G+PG + S L GE + C + +G
Sbjct: 236 GDPGSDGIPGERGDRGILGVQGEPGKDGSPGLKGTRGTRGKRGERGRKGDMCDSEESEEG 295
Query: 292 DCD-*LSGEGECGPHEPPDRGE 230
+CD S EGEC E + GE
Sbjct: 296 ECDSEESEEGECDSEE-SEEGE 316
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 375 PENSMPGSPLGPKSPSTPKS-SDVGSNPGSPTFTQQYSPVPNSMNE 509
P+ + S +GP STP + V +N G P Q P PNS N+
Sbjct: 53 PDEVLAESGVGPPVASTPPAPQPVPNNMGPPPHVNQ-GPPPNSANQ 97
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPK------SPSTPKSSDVGSNPGSPT 467
GA+ P + +G D + + P P GPK P+ PK + P PT
Sbjct: 10 GATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPT 63
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G + P +GA ++ P GP P+ PK + P PT
Sbjct: 34 GPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGPT 81
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 363 DINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMNE 509
+++S + P PK+PSTP GS P SPT +P + N+
Sbjct: 893 EMDSGDEEPPLKKKKPKTPSTPP----GSPPRSPTLAYTTAPADTTENQ 937
>SB_50769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
+PG M G + P ++ P S + T GS PG T Q +P
Sbjct: 78 APGLMPGGAATTPGPSSAAPTSAAPTSAGPTTGGQTSGSTPGGTTAAPQTTP 129
>SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 375 PENSMPGSPLGPKSPSTPKSSDVG---SNPGSPTFTQQYSPVPNSMNE 509
P PG+PL P+ P+ P ++G S +P+ + SP P E
Sbjct: 156 PPQMAPGTPLMPRIPTPPLPQNMGLGLSRTSTPSPELRVSPSPTLKTE 203
>SB_14526| Best HMM Match : Drf_FH1 (HMM E-Value=0.16)
Length = 517
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGP-KSPSTPKSSDVGSNPGSPTFTQQY 482
TSN S N A +SP+ S P S SSD+G NP P +
Sbjct: 412 TSNAETAPSEDANRPSA----DSPQPSDPDDTAHALNSTVEDSSSDLGQNPQVPDYVPDS 467
Query: 483 SPVPNS 500
SP P +
Sbjct: 468 SPDPGA 473
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 342 NMSGAHSDINSPENSMPGSP-LGPKSPSTPKSSD 440
N ++ S PGSP + P+SP TP S+D
Sbjct: 3082 NQQQGRPSLDEQRRSEPGSPFVEPQSPRTPSSTD 3115
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 375 PENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
P ++ P +PL PSTP S+ P +PT
Sbjct: 1645 PRSTTPTTPLSSSGPSTPISTVAPMTPLTPT 1675
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGS--NPGSPTFTQQYS 485
++ G++ G H+ + SP S P PST SSD GS + P T+ S
Sbjct: 314 TTEGSLDGQHT-LRSPSTGSISSHGVPVEPSTSPSSDYGSFISDAGPRLTRSES 366
>SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 595 SGDAGRDLVSGEPVGDFVDPLGLC 524
+GDAGRD V+ G F+ P+G C
Sbjct: 339 TGDAGRDGVAEGRRGTFMSPVGAC 362
>SB_24750| Best HMM Match : Rad10 (HMM E-Value=5.1)
Length = 576
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 345 MSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
+S H PE + GS G KSP TP++S GS S
Sbjct: 123 VSEPHMVYLEPEFEVGGSKSGRKSPITPQTSLTGSKIAS 161
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 327 ASSPGNMSGAHSD-INSPENSMPGSPLGPKSPSTPKSSDVGS 449
A +PG+ S +SP+ M SP GP P++P + S
Sbjct: 337 AKAPGSTEPTVSQSASSPKIPMSTSPTGPSQPNSPTDTQASS 378
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGEL 368
GD G++ G G GPKGD G++ G+L
Sbjct: 53 GDQGVQGPIGPQGYNGTQGPKGDQGVKGVGDL 84
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTP-KSSDVGSN--PGSP 464
A +P + + +N +PG P P P TP KS + G N PG+P
Sbjct: 19 AHAPSPCQNCCAQGHDGKNGIPGIPGVPGKPGTPGKSGNDGRNGKPGAP 67
>SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = +3
Query: 309 SNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
SN P N + N N P +P P+ P S+ +NP S
Sbjct: 28 SNNPASNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 78
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 73 PNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 114
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 118 PNNPSSNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 159
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
P N S N N P +P P+ P S+ +NP S
Sbjct: 154 PNNPSSNPKPNNPSSNPKPNNPASNPKPNNPSSNPKPNNPAS 195
>SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055)
Length = 545
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPST---PKSSD-VGS-----NPGSPTFTQQYSPVPNSM 503
SD S +SM G+P P+ PST S D +G+ PGSP+ + S + +SM
Sbjct: 8 SDTESTSSSMRGNPGSPRDPSTLFEEVSMDTLGTQYARGGPGSPSTSSDSSELDSSM 64
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIE 383
GD GLE + G G +GP+GDPG E
Sbjct: 947 GDDGLEGSP---GPRGPIGPQGDPGPE 970
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,384,552
Number of Sequences: 59808
Number of extensions: 319862
Number of successful extensions: 1799
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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