Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0151
(389 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43) 131 2e-31
SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24) 112 8e-26
SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28) 111 2e-25
SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 2e-11
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 3e-10
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 52 1e-07
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_35353| Best HMM Match : Arm (HMM E-Value=6.6e-27) 34 0.036
SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31) 32 0.14
SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) 30 0.77
SB_41997| Best HMM Match : RVT_1 (HMM E-Value=3) 29 1.0
SB_50445| Best HMM Match : PT (HMM E-Value=2) 29 1.4
SB_45346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_11732| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_46444| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_58734| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34) 27 7.2
SB_56885| Best HMM Match : EGF_CA (HMM E-Value=1.1e-08) 27 7.2
SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 27 7.2
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 27 7.2
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 27 7.2
SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18) 27 7.2
SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17) 27 7.2
SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06) 26 9.5
SB_38033| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14) 26 9.5
SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
>SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)
Length = 215
Score = 131 bits (317), Expect = 2e-31
Identities = 66/130 (50%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQ-GGVVGEQCAWALGNIAGDGPETRDMIL 179
WALTNIASGT + T AV +GGAVP + LL V EQ WALGNIAGDGP R+ ++
Sbjct: 27 WALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGDGPLMRNTVI 86
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
G + L+ L+ T LR WT SNLCRNKNP V LP I+ L+ D+
Sbjct: 87 ACGALGPLLALIKPSTSIQFLRNVTWTLSNLCRNKNPPPDVTAVQQVLPAIARLILSDDK 146
Query: 360 DVLADSCWAL 389
+VLAD+CWAL
Sbjct: 147 EVLADTCWAL 156
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAWALGNI 143
WAL+ + G + V+D G VPKL+ LLG V + AWA+ N+
Sbjct: 154 WALSYLTDGVNERIQLVLDSGVVPKLVELLGYPEVNVLEAAWAISNV 200
Score = 29.9 bits (64), Expect = 0.77
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 117 QCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLV 296
+ AWAL NIA E + G + V LL++ + AVW N+ PL+
Sbjct: 24 EAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSS-VHDNVAEQAVWALGNIA-GDGPLM 81
Query: 297 QFDLVA 314
+ ++A
Sbjct: 82 RNTVIA 87
>SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)
Length = 163
Score = 112 bits (270), Expect = 8e-26
Identities = 58/121 (47%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQ-GGVVGEQCAWALGNIAGDGPETRDMIL 179
WALTNIASGT + T AV +GGAVP + LL V EQ WALGNIAGDGP R+ ++
Sbjct: 43 WALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGDGPLMRNTVI 102
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
G + L+ L+ T LR WT SNLCRNKNP V LP I+ L+ D+
Sbjct: 103 ACGALGPLLALIKPSTSIQFLRNVTWTLSNLCRNKNPPPDVTAVQQVLPAIARLILSDDK 162
Query: 360 D 362
+
Sbjct: 163 E 163
Score = 29.9 bits (64), Expect = 0.77
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 117 QCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLV 296
+ AWAL NIA E + G + V LL++ + AVW N+ PL+
Sbjct: 40 EAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSS-VHDNVAEQAVWALGNIA-GDGPLM 97
Query: 297 QFDLVA 314
+ ++A
Sbjct: 98 RNTVIA 103
>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
Length = 234
Score = 111 bits (267), Expect = 2e-25
Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMIL 179
WALTNIASGT + T AVV+ GAVP + LL V EQ WALGNI GDGP RD ++
Sbjct: 78 WALTNIASGTSEQTQAVVNAGAVPFFLKLLNSPRQHVCEQAVWALGNIVGDGPVLRDFVI 137
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
G+++ L+ +N P + LR W NLCRNK P D + LP ++ L+ D
Sbjct: 138 GYGVVKPLLKFVNPGVPITFLRNVTWVLVNLCRNKEPPPPIDTIREVLPALALLIHHQDL 197
Query: 360 DVLA 371
D A
Sbjct: 198 DTAA 201
Score = 35.1 bits (77), Expect = 0.021
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 117 QCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQTPTSQL-RIAVWTYSNLCRN---- 281
+ AWAL NIA E ++NAG + + LLN +P + AVW N+ +
Sbjct: 75 EAAWALTNIASGTSEQTQAVVNAGAVPFFLKLLN--SPRQHVCEQAVWALGNIVGDGPVL 132
Query: 282 KNPLVQFDLVAPALPYIS 335
++ ++ + +V P L +++
Sbjct: 133 RDFVIGYGVVKPLLKFVN 150
Score = 29.9 bits (64), Expect = 0.77
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 6 ALTNIASGTRQHTMAVVDGGAVPKLISLL 92
A+ NI +GT + T V+D G +P +I L
Sbjct: 204 AVGNIVTGTDEQTQEVIDAGLIPLIIQTL 232
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 249 AVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQDVLADSCWAL 389
A W +N+ + Q + A A+P+ LL Q V + WAL
Sbjct: 76 AAWALTNIASGTSEQTQAVVNAGAVPFFLKLLNSPRQHVCEQAVWAL 122
>SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLL-GQGGVVGEQCAWALGNIAGDGPETRDMIL 179
W +TN+++GT + T+ V+ A P LI+ L GQ + +QCAWALGN++GD E RD++
Sbjct: 121 WCITNLSAGTHEDTLRVLKAAA-PYLITYLSGQNLSLQDQCAWALGNMSGDSVECRDLLR 179
Query: 180 NAGIMQALVPLLNAQT 227
GI+ + LL T
Sbjct: 180 AQGIVPPMANLLKVST 195
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 61.3 bits (142), Expect = 3e-10
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +3
Query: 144 AGDGPETRDMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPAL 323
AGDGP RD ++ G+++ L+ +N P + LR W NLCRNK P D + L
Sbjct: 789 AGDGPVLRDFVIGYGVVKPLLKFVNPGVPITFLRNVTWVLVNLCRNKEPPPPIDTIREVL 848
Query: 324 PYISDLLEISDQDVLA 371
P ++ L+ D D A
Sbjct: 849 PALALLIHHQDLDTAA 864
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDG-PETRDMI 176
W L+NI +G + V+D G +P +I L G ++ AWA+ N+ G E ++
Sbjct: 908 WFLSNITAGNQSQVQEVIDAGLIPLIIQTLETGEFQTQKEAAWAISNMTVSGRREQVAVL 967
Query: 177 LNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKN 287
++ ++ L LL+ + T ++I + +N+ + N
Sbjct: 968 VHCNAVEHLCKLLDVR-DTQVVQIVLDGLNNILKGDN 1003
Score = 41.9 bits (94), Expect = 2e-04
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 6 ALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMILN 182
A+ NI +GT + T V++ GA+ LL + ++ W L NI +++
Sbjct: 867 AVGNIVTGTDEQTQVVLNHGALSHFTGLLTHHKEKIKKEAVWFLSNITAGNQSQVQEVID 926
Query: 183 AGIMQALVPLLNAQTPTSQLRIAVWTYSNL-CRNKNPLVQFDLVAPALPYISDLLEISDQ 359
AG++ ++ L +Q + A W SN+ + V + A+ ++ LL++ D
Sbjct: 927 AGLIPLIIQTLETGEFQTQ-KEAAWAISNMTVSGRREQVAVLVHCNAVEHLCKLLDVRDT 985
Query: 360 DVL 368
V+
Sbjct: 986 QVV 988
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVV 110
WALTNIASGT + T AVV+ G P L + GVV
Sbjct: 770 WALTNIASGTSEQTQAVVNAGDGPVLRDFVIGYGVV 805
Score = 37.1 bits (82), Expect = 0.005
Identities = 24/87 (27%), Positives = 37/87 (42%)
Frame = +3
Query: 129 ALGNIAGDGPETRDMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDL 308
A+GNI E ++LN G + LL + + AVW SN+ VQ +
Sbjct: 867 AVGNIVTGTDEQTQVVLNHGALSHFTGLLTHHKEKIK-KEAVWFLSNITAGNQSQVQEVI 925
Query: 309 VAPALPYISDLLEISDQDVLADSCWAL 389
A +P I LE + ++ WA+
Sbjct: 926 DAGLIPLIIQTLETGEFQTQKEAAWAI 952
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 52.4 bits (120), Expect = 1e-07
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMIL 179
+ L +A + QH VVD GA+ L+ L + V E AWALG IA E ++
Sbjct: 103 FVLRAVAKHSAQHAQCVVDCGALDALVICLEEFDPGVKEAAAWALGYIARHNAELSQAVV 162
Query: 180 NAGIMQALVPLLNAQTPTSQL-RIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISD 356
+AG + LV L Q P L RIA S++C++ L Q + A A+ +++ ++ +D
Sbjct: 163 DAGAVPLLV--LCIQEPELALKRIASSALSDICKHSPELAQTVVDAGAIAHLAQMILNTD 220
Score = 41.9 bits (94), Expect = 2e-04
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCA-WALGNIAGDGPETRDMIL 179
WAL IA + + AVVD GAVP L+ + + + ++ A AL +I PE ++
Sbjct: 145 WALGYIARHNAELSQAVVDAGAVPLLVLCIQEPELALKRIASSALSDICKHSPELAQTVV 204
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
+AG + L ++ T R S + ++ L + + A P + + L+ D+
Sbjct: 205 DAGAIAHLAQMI-LNTDAKLKRQVFSALSQIAKHSVDLAEMVVEAEIFPAVLNCLKDPDE 263
Query: 360 DV 365
V
Sbjct: 264 YV 265
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 156 PETRDMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYI 332
P+ + + NAG+M L PLL PT Q + A L + L + + A LP +
Sbjct: 29 PQNIETLQNAGVMSLLRPLLLDIVPTIQ-QTAALALGRLANYNDDLAEAVVKADILPQL 86
>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMIL 179
W L+N+ +G + AVV G VP + +L + ++ A L NI+ GP+ ++L
Sbjct: 41 WVLSNLTAGPAESCWAVVHAGLVPVTVKMLASEAFDIKKEVALTLCNISYHGPDCLKVVL 100
Query: 180 NAGIMQALVPLLNA 221
+ M+ V LL +
Sbjct: 101 DCRGMEGFVHLLKS 114
Score = 29.5 bits (63), Expect = 1.0
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +3
Query: 15 NIASGTRQHTMAVVDGGAVPKLISLLGQGGV--VGEQCAWALGNIAGDGPETRDMILNAG 188
NI SG ++ + GG + + Q V ++ W L N+ E+ +++AG
Sbjct: 2 NIISGPDEYGAMAMQGGLLLHAVMACLQSSHRHVRKESLWVLSNLTAGPAESCWAVVHAG 61
Query: 189 IMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQDVL 368
++ V +L ++ + +A+ T N+ + ++ L + LL+ DQD +
Sbjct: 62 LVPVTVKMLASEAFDIKKEVAL-TLCNISYHGPDCLKVVLDCRGMEGFVHLLKSHDQDTV 120
>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 309 VAPALPYISDLLEISDQDVLADSCWAL 389
V+P LP +S LL +D +VLAD+CWAL
Sbjct: 816 VSPCLPLLSRLLFSTDAEVLADTCWAL 842
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLL 92
WAL+ + G + AV+D G +L+ LL
Sbjct: 840 WALSYLLDGPNEKIQAVIDSGVCRRLVELL 869
>SB_35353| Best HMM Match : Arm (HMM E-Value=6.6e-27)
Length = 513
Score = 34.3 bits (75), Expect = 0.036
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 159 ETRDMILNAGIMQALVPLLNAQTPTSQLRI---AVWTYSNLCRNKNPLVQFDLVAPALPY 329
+TR ++ G ++ LV LL++ L A+W S N ++ D+V L +
Sbjct: 207 DTRKVVHKYGGLETLVKLLSSHQNKKLLAAVTGAIWKCSVSVENTKRFLELDIVEALLRF 266
Query: 330 ISDLLEISDQDVLADSCWAL 389
+ D E + V+A + W +
Sbjct: 267 LQDEHEEQPEQVIASASWGI 286
>SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31)
Length = 624
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 35 TTYHGCC*WWSCTQTNKPFRSRRCGRRTVRMGTGE 139
+T H CC W SC + KPF+++ +R+ TGE
Sbjct: 449 STQHVCC-WESCDRAGKPFKAKYKLVNHIRVHTGE 482
>SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)
Length = 1285
Score = 29.9 bits (64), Expect = 0.77
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 222 VHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMRTVLRPHRLDLK 88
+HL+ + RPA+ LH SY + R S +R +R L LK
Sbjct: 520 IHLDYSSRPAMDLHTASYTKTTPRFSRESLYSIRRQMRTRNLFLK 564
>SB_41997| Best HMM Match : RVT_1 (HMM E-Value=3)
Length = 532
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 222 VHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMRTVLRPHRLDLK 88
+HL+ + RPA+ LH SY + L S +R +R L LK
Sbjct: 106 IHLDYSLRPAMDLHTASYTKTTPTFSLQSLYSIRCQMRTRNLFLK 150
>SB_50445| Best HMM Match : PT (HMM E-Value=2)
Length = 206
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -2
Query: 202 KACIIPAFRIISLVSGPSPAMFPSAHAHCSPTTPP*PKRLISLGTAPPSTTAMVCCRVPE 23
K+ II ++ + + P +PS C+ P P ++ GT+ P+T V RVP+
Sbjct: 10 KSIIIKERKVNNSMKQNVPTGYPSTEHKCTNRVPKQPTQMYQQGTSTPNTN--VPTRVPK 67
>SB_45346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 203 QGLHYSCI*DHISSLRTVSSYVPQCPCALFSDHTALT 93
+GL YSCI ++ +SL + Y+P P + ++ T
Sbjct: 64 KGLQYSCIQEYAASLAAKNVYLPAMPNGKYPSNSGTT 100
>SB_11732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 108 VGEQCAWALGNIAG-DGPETRDMILNAGIMQALVPLLNAQTPTSQLRIAV 254
V E A +GN+ +GPE+R + AG+++ ++ L++ P +++
Sbjct: 1004 VAENIAVLIGNLFNLEGPESRKRSVEAGLIKTVLKLVDGAEPIQNTCLSI 1053
>SB_46444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 28.7 bits (61), Expect = 1.8
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Frame = +3
Query: 48 AVVDGGAVPKLISLL-GQGGVVGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQ 224
A+ G +P L++LL + A+G A + P+ +I ++ L LL +
Sbjct: 494 AIRKAGGIPSLVNLLTSTNQALLVNVTKAVGACATE-PDNMAIIDRLDGVRLLWSLLKST 552
Query: 225 TPTSQLRIAVWTYSNLCRN-KNPLVQFDLVAPALPYISDLLEISDQDVLADSCWAL 389
P Q A W N K+ L I LL+ +DQ+VLA C A+
Sbjct: 553 NPRVQAS-AAWAICPCIENAKDAGEMVRSFVGGLELIVSLLKSNDQEVLASVCAAI 607
>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 222 VHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMRTVLRPHRLDLK 88
+HL+ + RPA+ LH SY + S +R +R L LK
Sbjct: 106 IHLDYSSRPAMDLHTASYTKTTPTFSRESLYSIRRQMRTRNLFLK 150
>SB_58734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 27.1 bits (57), Expect = 5.4
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 102 GVVGE--QCAWALGNIAGDG-PETRDMILNAGIMQALVPLLNAQTPTSQLRIAVWTYS-N 269
G+VG C+ L + +G P TR +LN I LV ++ + L VWT+
Sbjct: 13 GIVGNILVCSVILHQRSRNGRPTTRYFVLNLAISDLLVLIMFIPFDLAYLEYEVWTFGLA 72
Query: 270 LCRNKNPL 293
+C+ N +
Sbjct: 73 MCKIINTI 80
>SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34)
Length = 722
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 108 VGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQTPT 233
VGE C G DGP T I ++ AL L+ A PT
Sbjct: 455 VGENCPVTAGKKLPDGPSTGSEIAGLNLI-ALRSLITALDPT 495
>SB_56885| Best HMM Match : EGF_CA (HMM E-Value=1.1e-08)
Length = 77
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 173 DPKCRN--NAGLGATSKCTNSNQSTENSCLDLQ*PLQKQKPSSTIRSC--SPGS 322
DP C G G+ SKC+ Q +N C D+ + + +C SPGS
Sbjct: 3 DPACETCIGDGPGSCSKCSVGYQMKDNKCTDVD-ECESSPCDAESETCSNSPGS 55
>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 179 KCRNNAGLGATSKCTNSNQSTENSCLDLQ*PLQKQKPSSTIRSCSPGSTLHF*FIGNIRS 358
+C G G ++ +N + +K KP +T R C+PG FIG+ +
Sbjct: 696 QCSVTCGTGIETRTVECMDVEQNITQEESACAEKPKPHTT-RRCNPGGCKTHWFIGSSFT 754
Query: 359 RCA 367
C+
Sbjct: 755 SCS 757
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 222 VHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMRTVLRPHRLDLK 88
+HL+ + RPA+ LH SY + S +R +R L LK
Sbjct: 141 IHLDYSSRPAMDLHTASYNKTTPTFSRESLYSIRRQMRTRNLFLK 185
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 372 PRAHLDLIFPINQKCKVEPGLQDRIVLEGFC-FCKG 268
P A +++ + CK + QDR++LE C C G
Sbjct: 1782 PEASPEIVIKCLRNCKEKVNPQDRLILEASCKNCNG 1817
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -2
Query: 187 PAFRIISLVSGPSPAMFPSAHAHCSPTTPP*PKRLISLGTAPPSTTAMVCCRVPE 23
P F IS + + FP+ + +P P+ S+ P TTA V P+
Sbjct: 537 PDFDFISTAPQTTASAFPTPPQTTASASPTPPQTTASVSPTSPQTTASVSPTPPQ 591
>SB_27063| Best HMM Match : GATA (HMM E-Value=2e-18)
Length = 563
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/92 (18%), Positives = 36/92 (39%)
Frame = +2
Query: 44 HGCC*WWSCTQTNKPFRSRRCGRRTVRMGTGEHSWRRSGD*RYDPKCRNNAGLGATSKCT 223
+ C +W N+P ++ G +T S ++ + + +PK ++ L ++S
Sbjct: 434 NACGLYWKLHAVNRPLSMKKDGIQTRNRKVSSKSKNKNKNVKQEPKLGDDLKLSSSSPLM 493
Query: 224 NSNQSTENSCLDLQ*PLQKQKPSSTIRSCSPG 319
N +S + P++ R PG
Sbjct: 494 NQTSVISSSIISPMGHNGIHTPTAFSRPSMPG 525
>SB_10751| Best HMM Match : TNFR_c6 (HMM E-Value=7.6e-17)
Length = 738
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 94 PKRLISLGTAPPSTTAMVCCRVPEAI 17
P I L + PPSTT +C +P+ +
Sbjct: 637 PPACIPLASLPPSTTRDICGAIPQEL 662
>SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06)
Length = 768
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 222 VHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMRTVLRPHRLDLK 88
+HL+ + RPA+ LH SY + S +R +R L LK
Sbjct: 91 IHLDYSSRPAMDLHTASYTKTTPTSSGDSLYSIRRQMRTRNLFLK 135
>SB_38033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 72 PKLISLLGQGGVVGEQCAWALGNIAGDGPETRDM 173
PK+ +L +G V A+A G++ GPETR +
Sbjct: 84 PKVWALTTKGTVYPSDVAFAAGDVLLLGPETRGL 117
>SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14)
Length = 624
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 222 VHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMRTVLRPHRLDLK 88
+HL+ + RPA+ LH SY + S +R +R L LK
Sbjct: 78 IHLDHSSRPAMDLHTASYTKTTPTFSRESLYSIRRRMRTRNLFLK 122
>SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1751
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 232 VGVCAFRSGTKACIIPAFRIISLVSGPSPAMFPSAHAHCSPTTPP*PKRLISLG 71
VGVC R C+ A + I + S P +A + TTPP RL S G
Sbjct: 211 VGVCV-RVELLGCVSCASQAIGVSSNKIPDSSLTASSQYDGTTPPSKGRLYSPG 263
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -2
Query: 160 SGPSPAMFPSAHAHCSPTTPP*PKRLISLGTAPPSTTAMVCCRVPEA 20
+ P P A TT P L TAP +TTA + PEA
Sbjct: 284 TAPEATTAPEAATASLVTTAPEATTASLLTTAPETTTASLVTTAPEA 330
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,473,138
Number of Sequences: 59808
Number of extensions: 290009
Number of successful extensions: 827
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 681761575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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