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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0110
         (631 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23199| Best HMM Match : No HMM Matches (HMM E-Value=.)             146   1e-35
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)               58   4e-09
SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   4e-07
SB_55538| Best HMM Match : zf-BED (HMM E-Value=1.4)                    52   5e-07
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)               48   8e-06
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)                    43   2e-04
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)                   38   0.009
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)            37   0.012
SB_56273| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.016
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.063
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)                   30   1.8  
SB_12718| Best HMM Match : rve (HMM E-Value=0.0031)                    30   1.8  
SB_58432| Best HMM Match : DUF735 (HMM E-Value=4.6)                    30   1.8  
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)         29   2.4  
SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)               29   2.4  
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)                  29   2.4  
SB_25925| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_25263| Best HMM Match : F5_F8_type_C (HMM E-Value=5.4e-26)          29   2.4  
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_22631| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)                   28   7.2  
SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_47144| Best HMM Match : IU_nuc_hydro (HMM E-Value=0)                27   9.5  
SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06)               27   9.5  

>SB_23199| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 320

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/100 (67%), Positives = 78/100 (78%)
 Frame = +1

Query: 232 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNLY 411
           LKR  ++    +LPPV+KNMAFQK+ NMEQSLFTR VRLGVP V+LDAQGRARPS+CNLY
Sbjct: 44  LKRHDLVELGFKLPPVIKNMAFQKFSNMEQSLFTRFVRLGVPTVQLDAQGRARPSLCNLY 103

Query: 412 RWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNG 531
            WRY+ LG+L HV   PEY   N GL  DFQL++V DFNG
Sbjct: 104 NWRYKTLGNLPHVLTWPEYGVENPGLHFDFQLIDVQDFNG 143



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +1

Query: 1   FRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQ 168
           FRAFELLRSG DR+ YLLVKEAKIIAMTCTHAALKR +LV++GFK   ++   + Q
Sbjct: 11  FRAFELLRSGRDRTNYLLVKEAKIIAMTCTHAALKRHDLVELGFKLPPVIKNMAFQ 66


>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2578

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
 Frame = +1

Query: 22   RSGLDRS-KYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPL 198
            + G++ + K+ +++  KI+ +T T A++    L  +G     +++EE+A+ILE      L
Sbjct: 899  KQGIETNRKFEVLQSKKIVGLTITGASINHDLLQLLGPSV--VIVEEAAEILEPSLLAAL 956

Query: 199  LLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQ 378
                PQ     L+  I+IGDH QL P V      K  + + SL  R+V+   PY  L  Q
Sbjct: 957  ---TPQ-----LQHLILIGDHKQLRPNVDTYELTKDFDFDVSLMERLVKSNFPYKTLAKQ 1008

Query: 379  GRARPSICNLYRWRYRALGD 438
             R RP    L +  Y  L D
Sbjct: 1009 NRMRPEFSALLKDIYPNLKD 1028


>SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 45/156 (28%), Positives = 75/156 (48%)
 Frame = +1

Query: 145 ILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQS 324
           +++EE+A+ILE +    L+   P    S  +  IMIGDH QL P V  +  +   N++ S
Sbjct: 485 MIVEEAAEILEPQ----LVSVIP----SCTQHLIMIGDHQQLRPQVHFIKLRLKHNLDVS 536

Query: 325 LFTRMVRLGVPYVELDAQGRARPSICNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQ 504
           +F R+++  +PY +L  QGR R    +L R       DL   T+L +  +    +     
Sbjct: 537 MFERLIKGEIPYTQLKYQGRMRDEFADLLR-ELGIYEDLRTRTELGDKTSPVDCMEKTMF 595

Query: 505 LVNVDDFNGFGETEPSPYFYQNLAEAEYVVAVFMYM 612
           L+N         T  + + Y+N  EAE +V    ++
Sbjct: 596 LIN---HTRKESTRKTSHSYKNDFEAEQIVETAKFL 628


>SB_55538| Best HMM Match : zf-BED (HMM E-Value=1.4)
          Length = 1108

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 37/112 (33%), Positives = 54/112 (48%)
 Frame = +1

Query: 58  KEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLK 237
           + A +I  TC  A   R       F++  +L++ES Q  E E  +P++L          K
Sbjct: 525 QHADVICTTCVGAGDPRLSK----FRFRTVLIDESTQATEPECMVPVVLG--------CK 572

Query: 238 RWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARP 393
           + I++GDH QL PVV          + QSLF R+V LG+  + L  Q R  P
Sbjct: 573 QLILVGDHCQLGPVVMCKKAAN-AGLSQSLFERLVVLGIRPIRLQVQYRMHP 623


>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2077

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 54/192 (28%), Positives = 87/192 (45%)
 Frame = +1

Query: 52   LVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSR 231
            ++++A +I MT T AA  R  L ++  K   I++EE+A++LE      L       G   
Sbjct: 1440 ILRKAAVIGMTTTGAAKYREVLQEI--KPRIIIVEEAAEVLEAHIVTAL-----SPGCQH 1492

Query: 232  LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNLY 411
            L   I+IGDH QL P        K  +++ SLF R+V   +    L  Q R RP I  + 
Sbjct: 1493 L---ILIGDHEQLRPNPTVYKLAKDYHLDISLFERVVNNKMHLECLRKQHRMRPEISQML 1549

Query: 412  RWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGFGETEPSPYFYQNLAEAEYV 591
            +  Y  L +   V      +    G+  +   ++  +   F E   S     N+ EA++V
Sbjct: 1550 QHIYPDLENHESVLNFDNIK----GVSTNIFFIDHQEREEFIEEGRS---RSNIHEAKFV 1602

Query: 592  VAVFMYMRLIGW 627
             A+  Y+ L G+
Sbjct: 1603 AALCRYLILQGY 1614


>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
          Length = 798

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = +1

Query: 136 YDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNM 315
           +D ++++E+AQ LE   +IPLL         R  R I+ GDHHQLPP + +    K   +
Sbjct: 73  FDLVVIDEAAQALEASCWIPLL---------RAPRCILAGDHHQLPPTIISPKAAK-DGL 122

Query: 316 EQSLFTRMV-RLGVPYVEL 369
           E +L  R+V +LG   V +
Sbjct: 123 EVTLMERVVHQLGEKVVHM 141


>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
          Length = 2748

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 26/87 (29%), Positives = 43/87 (49%)
 Frame = +1

Query: 70   IIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIM 249
            II  TC  A  +R   ++        +++ES   LE E  +P +   P     R  R+++
Sbjct: 2320 IIICTCAEAGSQR---MRTHANIAQCIVDESNYCLEPEVLVPAVTAGP-----RCSRFVL 2371

Query: 250  IGDHHQLPPVVKNMAFQKYCNMEQSLF 330
            +GDH QL PV+++    K   + +SLF
Sbjct: 2372 VGDHKQLVPVLQSKEAWK-LGLGRSLF 2397


>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
          Length = 1347

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
 Frame = +1

Query: 19   LRSGLDRSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPL 198
            LR+  D   Y  V    ++A TC    +  +   Q  F Y   +++E++QI +     PL
Sbjct: 1007 LRAFYDSKSYP-VHFQSVVATTCL--GVNHALFTQRSFDY--CIVDEASQITQPVCLGPL 1061

Query: 199  LLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRM-VRLGVPYVELDA 375
                        + ++++GDH+QLPP+V+++  ++   M+ SLF R+  R     V L+ 
Sbjct: 1062 ---------RHARVFVLVGDHYQLPPLVQSLQARE-GGMDVSLFKRLSERHPQAVVSLEH 1111

Query: 376  QGRARPSICNL 408
            Q R    I  L
Sbjct: 1112 QYRMHKDIMTL 1122


>SB_56273| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 582

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 20/70 (28%), Positives = 37/70 (52%)
 Frame = +1

Query: 145 ILMEESAQILEIETFIPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQS 324
           ++++E     E ET +P+         +R K+ ++IGDH QL P++K+    K   +E S
Sbjct: 242 VIVDECGMCFEPETLVPITC-------ARAKQVVLIGDHKQLQPIIKDND-AKRLGLEIS 293

Query: 325 LFTRMVRLGV 354
           +F R  +  +
Sbjct: 294 MFERYAKKAI 303


>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1597

 Score = 34.7 bits (76), Expect = 0.063
 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
 Frame = +3

Query: 258 PPPAAPGRQEHGVPEVLQHGTEPVHQNGQTGCSVRGTGRTGSS*TQHLQPVPLALPGAGR 437
           PPP  P   +   P      T PV Q+G  G        T +   Q   P P  LPG  +
Sbjct: 693 PPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPPGQLPGQ-Q 751

Query: 438 PVPRDAAPGV-PRRQRGPAT 494
           P      PG+ P+ Q   AT
Sbjct: 752 PGQAGGRPGLNPQGQVTTAT 771


>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
 Frame = +3

Query: 3    PSLRTTEVRTGSVQVPVGQRSENNRDDVHARRPQTFRISANGFQIRQHTDGGISSN--PR 176
            P ++ T  + G  Q P  Q+ + + D     RPQ  +    GF  +Q           PR
Sbjct: 683  PGMQQTPSQYG-YQQPQQQQQQQSFDQF---RPQFQQAQYPGFPQQQQPSQSQQQQFFPR 738

Query: 177  DRDVHTAAAAESAGRQVPAEALDHD-RRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTGC 353
             + + T  A     +   A++L    R PPP  PG +  G P +   G+ P      T  
Sbjct: 739  QQRMMTTTAHSPTAQSPSADSLGSSVRSPPPPYPGSRTSGNPHM---GSSPAPIPSPT-- 793

Query: 354  SVRGTGRTGSS*TQHLQPVPLALPGAGRP 440
                TG   +  T H    P   P  G P
Sbjct: 794  ---STGSPQTPLTPHTPRFPNTAPSPGEP 819


>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
          Length = 1223

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 165 SNPRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQ 344
           S+  D  V + A+     +  P +  D  RRPP   P  +   +P  ++ G E + +   
Sbjct: 406 SSDSDSSVSSKASEGKPDKSAP-DVADGARRPPDEDPAIETRPIPRKVKVGDEVLARWAD 464

Query: 345 TGCSVRGTGR 374
            G   RGT R
Sbjct: 465 EGWYYRGTVR 474


>SB_12718| Best HMM Match : rve (HMM E-Value=0.0031)
          Length = 1667

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
 Frame = +3

Query: 144 HTDGGISS-NPRDRDVHTAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGT 320
           H +G + + +PR   VH  AAA +A    P E  DH         G     V   L+  T
Sbjct: 328 HAEGAVPAPSPRMHAVHNMAAAGTASAPGPGEKSDH----TALKAGLSALAVAAALKPVT 383

Query: 321 EPVHQNGQTGCSVRGTGR 374
           +P    G+     R  GR
Sbjct: 384 DPSGHGGERLAKRRHNGR 401


>SB_58432| Best HMM Match : DUF735 (HMM E-Value=4.6)
          Length = 328

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 190 IPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVR 345
           +P  ++ P+ GRS  K  + +GD  Q     +N+  +K C      F R+++
Sbjct: 195 VPNKIEVPKKGRSLKKARLCLGDRGQPTDTTQNIFAEKQCGHFTGHFDRIIK 246


>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
          Length = 1084

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +1

Query: 133 KYDNILMEESAQILEIETFIPLLLQNPQDGRS-RLKRWIMIGDHHQLPPVVKNMAFQKYC 309
           KY  +L E   +++ +E    +L  +     S   +  I+IGDH QL P        +  
Sbjct: 4   KYREVLQEIKPRVVIVEEAAEVLEAHIVTALSPACQHLILIGDHKQLRPNTNVYKLARDF 63

Query: 310 NMEQSLFTRM 339
            ++ SLF RM
Sbjct: 64  KLDVSLFERM 73


>SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)
          Length = 353

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +3

Query: 126 GFQIRQHTDGGISS----NPRDRDVHTAAAAESAGRQVPAEALDHD-RRPPPAAPGRQE 287
           G Q    TDG  SS    NP+D++       ++ G++   E L     +PPP   G++E
Sbjct: 52  GEQTAASTDGEKSSQQKENPKDKEQLQKENTKTGGQETSGEQLSSSNEKPPPKTEGQEE 110


>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
          Length = 2123

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +3

Query: 126 GFQIRQHTDGGISS----NPRDRDVHTAAAAESAGRQVPAEALDHD-RRPPPAAPGRQE 287
           G Q    TDG  SS    NP+D++       ++ G++   E L     +PPP   G++E
Sbjct: 330 GEQTAASTDGEKSSQQKENPKDKEQLQKENTKTGGQETSGEQLSSSNEKPPPKTEGQEE 388


>SB_25925| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 415

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 190 IPLLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFT 333
           +P  ++ PQ GRS  K  + +GD  Q     +N+  +K C      FT
Sbjct: 275 VPNKIEVPQKGRSLKKARLCLGDRGQPTDTTQNIFAEKQCGHFTGHFT 322


>SB_25263| Best HMM Match : F5_F8_type_C (HMM E-Value=5.4e-26)
          Length = 433

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 460 PEYRAANAGLRHDFQLVNVDDFNGFGETEPSPYFYQNLAEAEYVVAV 600
           PE   AN G  +   + N D      E + +P+F  NL    YV A+
Sbjct: 282 PELHPANYGRLYS-SIANTDTCWASSEVDTAPFFQVNLGRLRYVTAI 327


>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 267 AAPGRQEHGVPEVLQHGTEPVHQNGQTGCSVRGTGRTGSS*TQHLQPVPLAL 422
           A  G+Q  G  +++      VH+ GQ   S +G     +S ++ L P PL +
Sbjct: 513 AVGGKQSQGPVQLVSFPGNVVHETGQANVSGQGQYSALTSSSESLHPYPLQI 564


>SB_22631| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 173

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 332 PEWSDWVFRTWNWTH 376
           P+W++WV  TW W +
Sbjct: 62  PKWTNWVTATWTWLY 76


>SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)
          Length = 184

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
 Frame = +3

Query: 171 PRD-RDVHTAAAAESAGRQVPAEALDHDRR----PPPAAPGRQEHGVPEVLQHGTEPVHQ 335
           PRD RD+     +   GR +    L  D R    PPP   GR   G P   +  + P+ +
Sbjct: 39  PRDGRDIRGLPPSRD-GRDIRGLPLPRDGRDSRGPPPPRDGRDSRGTPIRDERESRPMER 97

Query: 336 NGQTGCSVRGTGRTGSS*TQHLQPVPLALPGAGRPVPRDAAPGVPRRQRGPAT 494
             +      G    G        P P  + G   P+  D      R  RGPA+
Sbjct: 98  EPRGPLPRDGRDSRG--------PPPRDIRGT-PPIREDGYANTSRGDRGPAS 141


>SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1548

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 192 TAAAAESAGRQVPAEALDHDRRPPPAAPGRQEHGVPEVLQHGTEPVHQNGQTGC 353
           T +   SA +++    L H ++  P  P R E G P+  +   E   + GQ  C
Sbjct: 6   TNSTCFSAEQELANSELQHTKKVAPKRPSRDEKGTPKTTK---EQKKKEGQYNC 56


>SB_47144| Best HMM Match : IU_nuc_hydro (HMM E-Value=0)
          Length = 316

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 436 DLCHVTQLPEYRAANAG-LRHDFQLVNVDDFNGFGE 540
           D+C  T +P Y+ A  G L H F L      +G G+
Sbjct: 61  DVCGRTDIPVYKGATKGLLGHTFDLPGYHGVDGLGD 96


>SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06)
          Length = 1035

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +1

Query: 142 NILMEESAQILEIETFIPLLLQNPQDGRSRLKRWI 246
           ++L +    ++E+  F  +    PQ+GR R  +W+
Sbjct: 54  SVLRDRQLSVIEVRDFREIGTSIPQNGRQRSTKWV 88


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,053,819
Number of Sequences: 59808
Number of extensions: 442585
Number of successful extensions: 1402
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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