Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120092.Seq
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 9e-23
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18) 29 3.0
SB_37040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 29 5.2
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 5.2
SB_37880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 104 bits (249), Expect = 9e-23
Identities = 48/61 (78%), Positives = 51/61 (83%)
Frame = -2
Query: 438 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 259
I C AAVAWE KPLSIE IEV PPKA EVR+KI ATGVCHTDAYTLSG DPEG+FP +L
Sbjct: 2 ITCQAAVAWEPKKPLSIETIEVAPPKAHEVRIKILATGVCHTDAYTLSGVDPEGLFPCIL 61
Query: 258 G 256
G
Sbjct: 62 G 62
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 199 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG 77
GD VV CNTCK C + + C+K + GV +G
Sbjct: 126 GDRVVVNPNSSCNTCKACRRGQPHFCEKGGTGSAIGVWKNG 166
>SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 417 AWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTL 298
AW G L ++ V P A + +IT TG T AYTL
Sbjct: 361 AWSFGLKLGLKSQNVGPGPAYLIPARITRTGTDGTPAYTL 400
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -3
Query: 482 IGSCPVQSCQQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRI 303
+GS P +S + +K +P+ R + +S S L K K R E+AIL R
Sbjct: 987 VGSGP-ESIKMRIKGSRKFPKMRRQLSSTTTSAEL--IEHKQSKTTPSGRKLETAILRRA 1043
Query: 302 HSPEKI 285
HSP+ +
Sbjct: 1044 HSPQTV 1049
>SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18)
Length = 354
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 546 SDILLHHRVSASYSTIISTFCDWQLSSAVMSTVGKV 439
SDIL HR S Y T+CD LS + T+ ++
Sbjct: 201 SDILKPHRKSLVYMVHSPTYCDPDLSRGIAGTMSRL 236
>SB_37040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 452 QSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIH 300
QS L+ P +RG Q + R KW + P KC ++ + E A++ R+H
Sbjct: 3 QSGNALTPLPHTRGIQTNTLLLR--KWAVEAPSKCRMKGQTKE-AVVQRVH 50
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 199 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG 77
GD VV + C C FCL + +LC+ G+ +G
Sbjct: 78 GDRVVINPLTSCGICDFCLKGQPHLCKVEGKNTAIGIKRNG 118
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 232 SPRFRRLQSQYYRKHSLRIFSGECIRVSMADSGGRDLNAH 351
SP+ + L SQ++ + +L IF G + VS + G LNAH
Sbjct: 2544 SPQLKSLDSQHFHEPALGIFKGLAL-VSQLEQ-GNPLNAH 2581
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 205 KPGDHVVPLYVPQCNTCKFCLNPKTNLCQKV 113
K GD V C TC +C + NLC K+
Sbjct: 74 KEGDRVAIEPGTPCRTCSYCKKGRYNLCAKM 104
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 455 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPV-KCALRSRPPESAILTRIHSPE 291
Q S K ++ PQ + KQASR LK KP + SRP ++++ T+ P+
Sbjct: 52 QASRKTKTSKPQDQDKQASRPRQASLKTKTSKPQDQDKQASRPRQASLKTKTSKPQ 107
>SB_37880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 329 VAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLPTVDMTALDN 475
V+V S + G +S SS +P+S + T+PT DM A N
Sbjct: 3 VSVAENTPSSSSGDPSSHSSQSQSVPSSMDSGGSTAATVPTQDMVAFAN 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,960,152
Number of Sequences: 59808
Number of extensions: 506964
Number of successful extensions: 1365
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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