Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021130
(817 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 161 8e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 2e-39
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 158 6e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 145 4e-35
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 97 2e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 3e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 50 2e-06
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.5
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 30 2.0
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.6
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.6
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.4
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 3.4
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 6.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 28 7.9
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 7.9
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 7.9
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 7.9
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 161 bits (390), Expect = 8e-40
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 435
YF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS
Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVS 208
Query: 436 ILTIEDGIFEVKSTAGDTHLGGED 507
+LTIEDGIFEVKSTAGDTHLGGED
Sbjct: 209 VLTIEDGIFEVKSTAGDTHLGGED 232
Score = 155 bits (377), Expect = 3e-38
Identities = 79/105 (75%), Positives = 88/105 (83%), Gaps = 3/105 (2%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
DN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDF
Sbjct: 234 DNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 293
Query: 690 YTSITRARFEELNADLFRSTMEPVGSL---SVMPRWDKGQIHDIV 815
YTSITRARFEELN DLF+ T EPV S +P K IHDIV
Sbjct: 294 YTSITRARFEELNQDLFKKTTEPVEQAIRDSKIP-GGKESIHDIV 337
Score = 133 bits (321), Expect = 2e-31
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 184
NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVL 124
Query: 185 TKMKETAEAYLGKTVQNAVITVP 253
TKMKETAEAYLG V +AV+TVP
Sbjct: 125 TKMKETAEAYLGAKVTDAVVTVP 147
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 159 bits (387), Expect = 2e-39
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 435
YFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS
Sbjct: 242 YFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVS 301
Query: 436 ILTIEDGIFEVKSTAGDTHLGGED 507
+L+IEDGIFEVKST GDTHLGGED
Sbjct: 302 VLSIEDGIFEVKSTHGDTHLGGED 325
Score = 146 bits (354), Expect = 2e-35
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
DN MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDF
Sbjct: 327 DNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDF 386
Query: 690 YTSITRARFEELNADLFRSTMEPV 761
YTSITRARFEE+NA LF+ T+EPV
Sbjct: 387 YTSITRARFEEMNAHLFKKTLEPV 410
Score = 110 bits (264), Expect = 2e-24
Identities = 62/108 (57%), Positives = 71/108 (65%), Gaps = 25/108 (23%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV----- 169
NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 65 NTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAG 124
Query: 170 --------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 253
SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 125 RPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 164 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 253
++SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 256 YFNDSQRQATKDAG 297
YFNDSQRQATKDAG
Sbjct: 174 YFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 158 bits (383), Expect = 6e-39
Identities = 75/85 (88%), Positives = 82/85 (96%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 435
YFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVS
Sbjct: 149 YFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVS 208
Query: 436 ILTIEDG-IFEVKSTAGDTHLGGED 507
ILTI+DG +FEVKSTAGDTHLGGED
Sbjct: 209 ILTIDDGSLFEVKSTAGDTHLGGED 233
Score = 152 bits (368), Expect = 4e-37
Identities = 70/102 (68%), Positives = 85/102 (83%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
DNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDF
Sbjct: 235 DNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDF 294
Query: 690 YTSITRARFEELNADLFRSTMEPVGSLSVMPRWDKGQIHDIV 815
YT I+RARFE+L +DLF S ++PV ++ K IH++V
Sbjct: 295 YTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVV 336
Score = 134 bits (324), Expect = 8e-32
Identities = 62/83 (74%), Positives = 73/83 (87%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 184
NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL
Sbjct: 65 NTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVL 124
Query: 185 TKMKETAEAYLGKTVQNAVITVP 253
KMKETAEAYLG+ V +AVITVP
Sbjct: 125 GKMKETAEAYLGQKVTSAVITVP 147
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 145 bits (351), Expect = 4e-35
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 435
YFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS
Sbjct: 847 YFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVS 905
Query: 436 ILTIEDGIFEVKSTAGDTHLGGED 507
+LTI++G+FEV +T GDTHLGGED
Sbjct: 906 LLTIDNGVFEVVATNGDTHLGGED 929
Score = 112 bits (270), Expect = 3e-25
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 184
NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVL
Sbjct: 763 NTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVL 822
Query: 185 TKMKETAEAYLGKTVQNAVITVP 253
TKMKETAEAYLGK V +AV+TVP
Sbjct: 823 TKMKETAEAYLGKKVTHAVVTVP 845
Score = 99.1 bits (236), Expect = 4e-21
Identities = 47/102 (46%), Positives = 70/102 (68%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 689
D ++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG DF
Sbjct: 931 DQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDF 990
Query: 690 YTSITRARFEELNADLFRSTMEPVGSLSVMPRWDKGQIHDIV 815
+TRARFEELNA LF+ST++PV + K +IH+IV
Sbjct: 991 SEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHEIV 1032
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 97.1 bits (231), Expect = 2e-20
Identities = 46/83 (55%), Positives = 61/83 (73%)
Frame = +1
Query: 259 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 438
F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+
Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSL 238
Query: 439 LTIEDGIFEVKSTAGDTHLGGED 507
L I+ G+F + AG+ LGG+D
Sbjct: 239 LNIQGGMFVTMAMAGNNRLGGQD 261
Score = 54.4 bits (125), Expect = 1e-07
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMV 181
NTI+DAKR IG+ F + K + F V +D G V KG PEE+ V
Sbjct: 94 NTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYV 153
Query: 182 LTKMKETAEAYLGKTVQNAVITVP 253
+ K++ AE L TV AV++VP
Sbjct: 154 IKKLRTMAERNLTTTVTKAVMSVP 177
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +3
Query: 516 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI--DSLFEG--- 680
R + + +Q +++ + L T ++RLR E AK L+ + + +I++ SL EG
Sbjct: 265 RFMQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKI 323
Query: 681 IDFYTSITRARFEELNADLFRSTMEPVGSLSVMPRWDKGQIHDIV 815
+ F +I+R FE +N DLF+ ++P+ + K ++ ++V
Sbjct: 324 VKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVV 368
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 181
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 182 LTKMKETAEAYLGKTVQNAVITVP 253
T++K TAE L V + VI+VP
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVP 204
Score = 65.7 bits (153), Expect = 4e-11
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +1
Query: 232 ECSYHGSRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 402
+C Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 403 FDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
D+G + V I G +V STA + +LGG D
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRD 292
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGID 686
D +V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+ E D
Sbjct: 294 DYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKD 353
Query: 687 FYTSITRARFEELNADLFRSTMEPVGS 767
+ + RA+FEEL ADL + P+ S
Sbjct: 354 VHGRMKRAQFEELAADLLKLVEAPLRS 380
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 64.9 bits (151), Expect = 7e-11
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +1
Query: 394 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGED
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGED 39
Score = 58.0 bits (134), Expect = 9e-09
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +3
Query: 510 DNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID- 686
DN ++ + EFK++ DL+ + AL+RLR A E+AK LSSS Q I + +
Sbjct: 41 DNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASG 100
Query: 687 ---FYTSITRARFEELNADLFRSTMEPVGSLSVMPRWDKGQIHDIV 815
++R++FE L ADL T+ P +KG+I D++
Sbjct: 101 PKHLNMKLSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVL 146
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 510 DNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 683
D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G
Sbjct: 216 DMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGK 275
Query: 684 DFYTSITRARFEELNADLFRSTMEPV 761
DF +TR EE+ DLF PV
Sbjct: 276 DFRVKVTREELEEMCQDLFDRVAGPV 301
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGT 423
+FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174
Query: 424 FDVSIL 441
+I+
Sbjct: 175 TVATIV 180
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 113 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 253
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 26/72 (36%)
Frame = +1
Query: 256 YFNDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYG 363
+FND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYG
Sbjct: 48 HFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYG 107
Query: 364 LDKK--GTGERN 393
LDK G ERN
Sbjct: 108 LDKARGGKAERN 119
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +2
Query: 119 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 253
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = +3
Query: 510 DNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLF 674
D +++ +FKR K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL
Sbjct: 195 DEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLC 254
Query: 675 EGIDFYTSITR 707
EGIDF ++R
Sbjct: 255 EGIDFQGQVSR 265
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = +1
Query: 385 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 507
+ VL++ LGG + DV++L++ +G+++V +T D LGG +
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRN 193
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 343 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDLT 513
A A L +G E + D G GT VS + +E+G +++ D H+ G T
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPFT 1561
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 391 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDLTI 516
+ LI D G+F VS E+GI ++ GD H+ G +
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPFKV 1469
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 407 TSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRT*QSHGEPLCPGV 544
T A P P++PSR +R PPP P + + P+ PG+
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPPGKPTKPTKPSLPPVPPGI 829
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 622
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 394 VLIFDLGGGTFDVSILTIEDGIFEVK 471
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 295 LHLLWLVFESH*STGNRDNCILHSFAEIS 209
++ LWL F + S+ + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 110 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPGTSMTLKDKPQK 289
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 290 MQ 295
Q
Sbjct: 714 SQ 715
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 400 IFDLGGGTFDVSILTIEDGIFEV 468
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 521 GEPLCPGVQEEIQKGPRYQQESS*AFAYCM 610
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 491 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 375
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 622
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 157 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSRYFN 264
PRG Q Y G+C S+S++NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 207 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 28
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 27 RLASNIVL 4
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 213 ISAKLCRM-QLSRFP-VLQ*LSKTSHKRCRYHLRLERSPNH 329
+SAKLC + LS+ LQ S ++C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM 610
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 468 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 337
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 530 LCPGVQEEIQKGPRYQQESS*AFAYCM 610
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 213 ISAKLCRM-QLSRFP-VLQ*LSKTSHKRCRYHLRLERSPNH 329
+SAKLC + LS+ LQ S ++C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,426,984
Number of Sequences: 59808
Number of extensions: 598221
Number of successful extensions: 2182
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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