Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0084
(532 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 84 8e-17
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 75 3e-14
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 49 3e-06
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 45 3e-05
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 39 0.003
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 36 0.027
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 33 0.19
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_15403| Best HMM Match : CH (HMM E-Value=0) 30 1.0
SB_56324| Best HMM Match : ASC (HMM E-Value=1.3e-14) 30 1.4
SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022) 29 1.8
SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_52622| Best HMM Match : Ank (HMM E-Value=1.2e-05) 29 3.1
SB_54206| Best HMM Match : SET (HMM E-Value=0.029) 28 4.1
SB_28876| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 4.1
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 5.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16) 28 5.4
SB_47464| Best HMM Match : RVT_1 (HMM E-Value=0.012) 28 5.4
SB_42674| Best HMM Match : DUF26 (HMM E-Value=1) 28 5.4
SB_47216| Best HMM Match : Oxidored_molyb (HMM E-Value=0) 27 7.2
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_25995| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 27 9.5
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 105 bits (251), Expect = 3e-23
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Frame = +2
Query: 53 VRAKIASKRNPEKEKEAQEWIEGVLGAKF--PPG--ELFEDVLKDGTVLCQLINKLKPGS 220
V+A I SK +P KE+EA++WI+ VLG G + LKDG VLC+L N+L G
Sbjct: 420 VKAGIDSKYDPTKEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRL--GG 477
Query: 221 VPKINTTGGQFKMMENITNFQSAIKA-YGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRE 397
KIN FK MENI NF S I+ GV D+FQTVDL+EK ++ V+ + A+GR
Sbjct: 478 DLKINQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRR 537
Query: 398 TYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVI 505
Y + P LGPK + + R F++ L G+T+I
Sbjct: 538 AYSLGK-DVPQLGPKESTKNPRQFTERQLNEGKTII 572
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 101 bits (242), Expect = 4e-22
Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
Frame = +2
Query: 71 SKRNPEKEKEAQEWIEGVLGAKFPPGELFED----VLKDGTVLCQLINKLKPGSVPKINT 238
+K + + +A WIEG+LG + G+ D VLKDG VLC++ NKL G KIN+
Sbjct: 62 AKYDSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKL--GGNIKINS 119
Query: 239 TGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEW 418
+ FKMMEN F GVP D+FQTVDL+EK+++ V++ + ALGR+ + +
Sbjct: 120 SKMAFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK- 178
Query: 419 SGPCLGPKPADECKRDFSDEVLKAGQ 496
+ LGPK A R+F++E +AGQ
Sbjct: 179 TCLALGPKEASANPREFTEEQRRAGQ 204
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 83.8 bits (198), Expect = 8e-17
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Frame = +2
Query: 62 KIASKRNPEKEKEAQEWIEGVLGAK-FPPGELFEDV---LKDGTVLCQLINKLKPGSVPK 229
KI K +P++E+EA+ WIE VLG K F E +DV LKDG +L +L KL G+ K
Sbjct: 17 KILEKYDPQQEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKL--GAKIK 74
Query: 230 INTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRH 409
+N FK MENI NF S GV D FQT DL+ D A + S +
Sbjct: 75 VNEQNMPFKQMENIGNFLSHCGHLGVASGDQFQTADLY---DNANMTSCQLIKDLDI--- 128
Query: 410 AEWSGPCLGPKPADECKRDFSDEVLKAGQTVI 505
P LGPK A+ R+F++E L+AG++++
Sbjct: 129 -----PTLGPKEAEANVREFTEEQLRAGESIL 155
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = +2
Query: 35 MSLERQVRAKIASKRNP---EKEKEAQEWIEGVLGAKF--PPGELFEDVLKDGTVLCQLI 199
+S E +K + P ++ K + WIEG F + F++ LK G VLC+L
Sbjct: 45 VSKENLKTSKFIMSKKPWPMDRAKVVRMWIEGKTSCNFGGDTADDFQNTLKSGVVLCKLA 104
Query: 200 NKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 367
N ++PG++ KIN F MMENI NF + ++ GV F T+DL+E K++ QV
Sbjct: 105 NAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTIDLFEGKNMHQV 160
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Frame = +2
Query: 44 ERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP---------PGELFEDVLKDGTVLCQL 196
E+ ++ +K E E A+ W+E + G PGE F + L+ G +LC++
Sbjct: 259 EKNNVGQVDAKYPKELEGNARRWVETMYGDTVAWGEERPNQRPGETFAEPLRSGVILCKI 318
Query: 197 INKLKPGSVPKINTTGGQFKMMENITNF-QSAIKAYGVPDIDVFQTVDLWEKKDIAQV 367
NK+K ++PKI + F M ENI+ F + G+ +++FQTVDL+E++++ V
Sbjct: 319 ANKIKSNAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLNLFQTVDLFERQNVGMV 376
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Frame = +2
Query: 32 NMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP---------PGELFEDVLKDGTV 184
+ L +V KI SK + E E + ++W+E +LG PGE F D + DG V
Sbjct: 14 SFGLTAEVNRKIQSKYDTELEMQCRDWLEKMLGENIEWGVETEYSRPGESFADGIFDGIV 73
Query: 185 LC 190
LC
Sbjct: 74 LC 75
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 194 LINKLKPGSVPKIN-TTGGQF---KMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKD 355
++N++ PG++ KI+ GG+F +++ENI F A + + +D+F DL+EK +
Sbjct: 203 VMNEVFPGAISKIHGINGGRFHGFQILENIEKFLKACQGEPFNCNVVDLFSPGDLYEKNN 262
Query: 356 IAQV 367
+ QV
Sbjct: 263 VGQV 266
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 56.8 bits (131), Expect = 1e-08
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Frame = +2
Query: 47 RQVRAKIASKRNPEKEKEAQEWIE--GVLGAKF----PPGELFE--DVLKDGTVLCQLIN 202
R A +S R+ E+ K A++W+ GVL A P LF+ L+DG +LCQ+ N
Sbjct: 7 RTASALSSSGRDVEEWKMARDWMISIGVLPAHGRVTDPNFTLFDFAQSLRDGVLLCQVAN 66
Query: 203 KLKPGSVPKINTTG--GQFKMMENITNFQSA-IKAYGVPDIDVFQTVDLWEKKDIAQVVS 373
L PG+V + QF ++NI NF +A + + + D D+F +L++ D +VV+
Sbjct: 67 VLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLFDANELYDVSDFGKVVN 126
Query: 374 TLFAL 388
TL L
Sbjct: 127 TLSKL 131
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +2
Query: 200 NKLKPGSVPKINTTGGQ--FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDI 358
N ++PG + K + G+ FKMMENI F + IK+YGV + +F TVDL+EK+++
Sbjct: 189 NAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +2
Query: 254 KMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCL 433
+ MENI NF ++ GV +D+FQTVDL+EK+++A R + P L
Sbjct: 16 RKMENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA------------RAKGLNCPQL 63
Query: 434 GPKPADECKRDFSDEVLKAGQTV 502
GPK A+ R F ++ L+AG+ +
Sbjct: 64 GPKEAEANPRSFDEDKLRAGKGI 86
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 98 EAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITN 277
EA+ WIE F + F + L DG +LC+LI + SV +IN G +N++
Sbjct: 32 EARRWIERATFTPFKNDD-FRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDNLSV 90
Query: 278 FQSAIKAYGVPDIDVFQTVDLWE 346
F A +A G+ +F+ DL E
Sbjct: 91 FFRACEALGLDKYQLFEHEDLDE 113
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 218 SVPKINTTGGQFKMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKDIAQVVSTLFALG 391
+ P N M ENI NF +A + + D+FQTV L+E++++ QV+S + A
Sbjct: 884 NTPSTNRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFA 943
Query: 392 RETYRH 409
R+ +H
Sbjct: 944 RKVRKH 949
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 167 LKDGTVLCQLINKLKPGSVPKINTTGG------QFKMMENITNFQSAIKAYGVPDIDVFQ 328
L DG VLC L+N G++P I+ K M+N+ F A K GV +
Sbjct: 336 LADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVDRELLCS 395
Query: 329 TVDLWEKKDIAQVVSTLFAL 388
+ D+ ++K +V +T+ AL
Sbjct: 396 SADILQEKSPQRVCATVQAL 415
>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 65 IASKRNPEKEKEAQEWIEGVLGAKFPPGE-LFEDVLKDGTVL 187
+++K +P + EA +WIE VLG K G+ + EDVLKDG +L
Sbjct: 1 MSAKYDPVMDAEAVDWIEKVLGEKVCQGKSINEDVLKDGQIL 42
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
Frame = +2
Query: 83 PEKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKP---------------G 217
P KE A WI +LG + + F +L G VLC+L N ++ G
Sbjct: 27 PLKEDLAS-WISRLLGEEELNTDTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRRG 85
Query: 218 SVPKINTT-------GGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVST 376
P T G F +N++NF + VPD+ +F+T DL K+ V+ T
Sbjct: 86 LFPACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLLT 145
Query: 377 LFALGRETYR 406
L + R+ ++
Sbjct: 146 LLEVARKAFK 155
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 35.5 bits (78), Expect = 0.027
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 260 MENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 367
M I F +GV D+FQTVDL+EK++I QV
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 50 QVRAKIASKRNPEKEKEAQEWIEGVLG 130
++ K+++K +P + EA +WIE VLG
Sbjct: 671 ELSRKMSAKYDPVMDAEAVDWIEKVLG 697
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 155 FEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVP 310
F+ +DG +C+L+N L+PG +P Q+A A+G+P
Sbjct: 449 FDTDWRDGMAICELVNALQPGLIPDSKYKEKTNSEATAKIGIQTAHDAFGIP 500
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 425 PCLGPKPADECKRDFSDEVLKAGQTVI 505
P LGPK A+ R+F++E L+AG++++
Sbjct: 10 PTLGPKEAEANVREFTEEQLRAGESIL 36
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 29 HNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKL 208
H+ S E QV + ++++ +++ + A +L+E V KDG +LC++IN
Sbjct: 40 HSHSKEEQVAFADWINSSLKEDESVHKYLP--IDASEDSSDLYEKV-KDGILLCKMINLS 96
Query: 209 KPGSV 223
PG++
Sbjct: 97 APGTI 101
>SB_56324| Best HMM Match : ASC (HMM E-Value=1.3e-14)
Length = 416
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -2
Query: 243 PVVLILGTEPGFSLLMSWQRTVPSLRT--SSNSSPGGNLAPRTPSIHSWASFSFSGLRL 73
P V I P + SW T P L + N++PG P ++W F +G RL
Sbjct: 145 PAVTICNNNP---IRKSWAATTPYLPVIMAYNANPGEEAIPINWDAYNWTGFGGAGFRL 200
>SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)
Length = 476
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 160 GCPQGRHCSLPAHQQAEAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRS 339
G QG C L + +++ + TVQ + EH K+ + ++I + + +
Sbjct: 267 GKHQGHRCDLASRLATNV----REELSKITVQIEEEHEKIVMARRAIEARKEAITQKKEA 322
Query: 340 MGEK-RHRPSSQHTV 381
+G+K H+ S TV
Sbjct: 323 LGQKIAHQASGIRTV 337
>SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 431 LGPKPADECKRDFSDEVLKAGQTVIG 508
LGP P+D+ RDF L++GQ V G
Sbjct: 233 LGPDPSDKKVRDFIWNTLQSGQVVPG 258
>SB_52622| Best HMM Match : Ank (HMM E-Value=1.2e-05)
Length = 402
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 5 SEKALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWI 115
+ +A T+ N + Q R KIA +R + E+E QE+I
Sbjct: 250 ANRAKTEDKNRQSDFQEREKIARERTRQLEQEHQEYI 286
>SB_54206| Best HMM Match : SET (HMM E-Value=0.029)
Length = 160
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 247 TVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRH 357
TVQ D E H LP N S T H C PN + + R+
Sbjct: 44 TVQVDKEKHILPASNLSY--TNHSCDPNAEFVFKPRN 78
>SB_28876| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 356
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 423 PLHSACL*VSRPRANSVLTTWAMSFFSHRSTVWNTSMSGTPYALIADW 280
PLH+ L SR R + TW ++FF+ ++ ++ + DW
Sbjct: 134 PLHAGTLITSRRRYFLIAATWVIAFFNASPLLYTMTLDNNNLCQL-DW 180
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 110 WIEGVLGAKF--PPGELFEDVLKDGTVLCQLINKLKPGSVP 226
++ G +G K+ PP FE +L+ T +I L PGS P
Sbjct: 1904 FVTGRMGEKYVTPPVLSFESILEQSTPFSPIIFILSPGSDP 1944
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 163 CPQGRHCSLPAHQQA--EAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCT 309
CP G +C H + W CP+ H W G + + +CT
Sbjct: 917 CPAGHYCIDGKHPEPCPAGWYCPEGTGHDWQPCPRGTYSPAQYLSHLGQCT 967
>SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 116 EGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTG 244
+G LGA F P +LF + + + ++N G V + TG
Sbjct: 73 QGSLGANFDPSKLFYGYMANLNIWANVLNDFNRGKVYEQGCTG 115
>SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16)
Length = 600
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 5 SEKALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPPGELFEDVLKD 175
+EK L HNMS + + K + + E+EK+ + EG K P E ++ KD
Sbjct: 23 TEKELANGHNMSKGDETKEKPSHRAEKEQEKDNKSSKEG--ETKEPKKEKADNEHKD 77
>SB_47464| Best HMM Match : RVT_1 (HMM E-Value=0.012)
Length = 558
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 384 PSVVRLTDTRNGAAPASDPSPLTNANVTFLMKS*RPGK 497
PS +R+ D + P + P+T V + S +PGK
Sbjct: 20 PSTIRILDVCSNTTPCRELRPVTEGQVLKELHSLKPGK 57
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 384 PSVVRLTDTRNGAAPASDPSPLTNANVTFLMKS*RPGK 497
PS +R+ D + P + P+T V + S +PGK
Sbjct: 467 PSTIRILDVCSNTTPCRELRPVTEGQVLKELHSLKPGK 504
>SB_42674| Best HMM Match : DUF26 (HMM E-Value=1)
Length = 493
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 125 LGAKFPPGELFEDV--LKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKA 298
L A PP DV L GT L LKP PK+ G + + +I F S++ A
Sbjct: 89 LMATLPPTSTAHDVERLSTGTKFA-LRQWLKPIVAPKVCNNTGLHRPVAHIPPFTSSVAA 147
Query: 299 YGVPDIDVFQTVDLWEKKDIAQVVST 376
G I + W D ++++ +
Sbjct: 148 QGKAPIKSVSALS-WPGTDQSEIMDS 172
>SB_47216| Best HMM Match : Oxidored_molyb (HMM E-Value=0)
Length = 672
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 11 KALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPPGELFEDVLK 172
K + HN+ Q S N K+ + +W EG + G L +DVLK
Sbjct: 368 KTKFKKHNIVSTIQCAGNRRSDMNRVKKVKGLDWSEGAISTAEWGGALLKDVLK 421
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 208 EAWLCPQDQHHRWTVQNDGEHHKL 279
EAWLC ++ RWT++ +H +L
Sbjct: 952 EAWLCDVERSMRWTLKELLKHCRL 975
>SB_25995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 159 SNSSPGGNLAPRTPSIHSWASFS 91
++S GN+A +TP ++ W FS
Sbjct: 281 AHSENNGNIAKKTPVLYDWKDFS 303
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 163 CPQGRHCSLPAHQQAEAWLCP 225
CP G C + +Q E+W CP
Sbjct: 124 CPPGFWCKRSSQEQDESWGCP 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,005,605
Number of Sequences: 59808
Number of extensions: 442140
Number of successful extensions: 1362
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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