Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0065
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 471 e-133
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 465 e-131
SB_56| Best HMM Match : Actin (HMM E-Value=0) 464 e-131
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 460 e-130
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 363 e-101
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 2e-65
SB_54| Best HMM Match : Actin (HMM E-Value=0) 217 5e-57
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 211 3e-55
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 201 4e-52
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 172 2e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 80 1e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 68 8e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 5e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 33 0.28
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.66
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.66
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 0.87
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 31 0.87
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.1
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 30 1.5
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.5
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 30 1.5
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.5
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 29 2.7
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 29 4.6
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 29 4.6
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 4.6
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 4.6
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 28 6.1
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 6.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 8.1
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 8.1
SB_13009| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.1
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 8.1
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 28 8.1
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 471 bits (1160), Expect = e-133
Identities = 219/224 (97%), Positives = 224/224 (100%)
Frame = +3
Query: 12 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 191
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 192 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 371
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 372 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 551
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 552 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 465 bits (1147), Expect = e-131
Identities = 217/224 (96%), Positives = 223/224 (99%)
Frame = +3
Query: 12 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 191
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 192 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 371
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 372 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 551
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 552 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 464 bits (1145), Expect = e-131
Identities = 217/222 (97%), Positives = 222/222 (100%)
Frame = +3
Query: 18 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 197
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 198 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 377
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 378 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 557
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 558 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 223
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 460 bits (1133), Expect = e-130
Identities = 215/222 (96%), Positives = 221/222 (99%)
Frame = +3
Query: 18 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 197
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 198 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 377
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 378 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 557
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 558 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDF
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDF 223
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 363 bits (892), Expect = e-101
Identities = 181/224 (80%), Positives = 189/224 (84%)
Frame = +3
Query: 12 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 191
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 192 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 371
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 372 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 551
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 552 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
I ERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDF 197
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 246 bits (601), Expect = 2e-65
Identities = 114/217 (52%), Positives = 154/217 (70%), Gaps = 3/217 (1%)
Frame = +3
Query: 30 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 203
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 204 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 380
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 381 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 560
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 561 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 671
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 217 bits (531), Expect = 5e-57
Identities = 96/140 (68%), Positives = 119/140 (85%)
Frame = +3
Query: 264 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 443
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 444 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 623
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 624 AEREIVRDIKEKLCYVALDF 683
AE++I+RD+KE LCY A+D+
Sbjct: 2249 AEQQIIRDLKETLCYCAMDY 2268
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 36 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 137
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 211 bits (516), Expect = 3e-55
Identities = 100/109 (91%), Positives = 106/109 (97%)
Frame = +3
Query: 357 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 536
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 537 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 186
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 18 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 197
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 198 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 284
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 201 bits (491), Expect = 4e-52
Identities = 94/102 (92%), Positives = 99/102 (97%)
Frame = +3
Query: 378 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 557
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 558 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 683
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDF 102
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 172 bits (419), Expect = 2e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +3
Query: 312 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 491
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 492 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 659
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +3
Query: 222 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 401
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 402 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 581
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 582 MKILTE 599
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +3
Query: 423 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 599
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 600 RGYSFTTTAEREIVRDIKEKLCYVALD 680
RG++FT+++ +IV DIKEK+CY++ D
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKD 853
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 6 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 176
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 177 GDEAQSKRGILTL 215
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 67.7 bits (158), Expect = 8e-12
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +3
Query: 390 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 566
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 567 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 680
+T ++ ++L ER E + IKE+ Y+ D
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPD 135
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 21 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 137
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 5e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 24 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 203
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 204 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 377
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 378 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 539
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 540 LR 545
R
Sbjct: 384 RR 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 150 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 329
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 459 TGIVLDSGDGVSHTVPI 509
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -3
Query: 134 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 18
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 267 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 446
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 447 SGRTTGIV 470
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +1
Query: 382 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPYPS--TRDTHSLTP 537
C+K T PCT PC+ CT+ +P +TP T TPY T T TP
Sbjct: 761 CTKRYT--PCTERYTPCTERYTPCTKRYIPFAKRYTPCTERYTPYTERYTPSTERYTP 816
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 422 PSRALAV-RVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPASGLGR-SRPHRLP-HEDP 592
PSR L R R + +R C HR L PSRH R S HRL H
Sbjct: 228 PSRHLHCHRPRLSNHHRPSRHHHC--HRPRLSNHHRPSRHLHCHCPRLSNHHRLSRHLHS 285
Query: 593 HRARLLVHYHRRAGNRS*HQ 652
+R RL +H+H + + H+
Sbjct: 286 NRLRLSIHHHPSSRHHHCHR 305
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 391 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPYPSTRDTHSLTPS 540
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +1
Query: 406 PCT--SPSKPCSRCTRPVVPPVSCW-----TPATVSPTPYPSTRDTHSLT 534
PCT +PS P + T P P C TP+T S PST T SLT
Sbjct: 404 PCTPSTPSTPSTPIT-PRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLT 452
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 32.3 bits (70), Expect = 0.38
Identities = 28/77 (36%), Positives = 33/77 (42%)
Frame = +2
Query: 413 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPASGLGRSRPHRLPHEDP 592
RR S A R RS R R+ RRR R R+PS H S RSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 593 HRARLLVHYHRRAGNRS 643
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 403 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 513
PP P P + TRP VP +T PTP P T
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPT 955
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 403 PPCTSPSKPCSRCTRPVVPPVSC 471
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 213 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 365
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 109 GNTARGASSPAKPALHIPEPLSTT 38
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 403 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
P TSP + P +R P+ PP C + V PTP P+ S +PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTP-PAISSKRSFSPS 360
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 354 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 470
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 109 GNTARGASSPAKPALHIPEPLSTT 38
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 403 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +1
Query: 394 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPSCVWTWP 558
ST P T+P+ T P + TP +PTP T T +LT T P
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP 100
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 403 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPY 504
P +P+KP + P P + TP T +PT +
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPTTF 150
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 391 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPYPSTRDTHSLTP 537
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 391 HSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPYPSTRDTHSLTP 537
H+ +P T P R T+P P + T PT P T H+ P
Sbjct: 107 HTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKP 156
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 241 TIPCSMGYLRVRIPLLLCASSPTYESFCPMPTITP 137
T P S+ RVR L L S+P Y S CP +TP
Sbjct: 592 TCPRSIVTPRVRARLSLHVSAPDYHSTCPRSIVTP 626
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 400 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHS 528
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 391 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 501
H+T P P T PS P C + P C+T T+SP P
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKP 701
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 109 GNTARGASSPAKPALHIPEPLSTT 38
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 371 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRH 538
DP HV R +RHVRR PS + VR ++ +RR L R H+R SRH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 391 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 391 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 394 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 394 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 394 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 394 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.3 bits (65), Expect = 1.5
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 499 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 347
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 346 LRGASVRRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 182
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 418 PSKPCSRCTRPVVPP 462
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 223 GYLRVRIPLLLCASSPTYESFCPMPTITP*WRGLPTI 113
G L +P A+SP Y S P+PT TP PTI
Sbjct: 1210 GALFTPLPHETSATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 412 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPYPSTR 516
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 439 CTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 406 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPS 540
P T+P KP S T P+ P +P+T P PST T + PS
Sbjct: 1310 PSTTPIKP-SPSTTPIKP-----SPSTTPIKPSPSTTSTTPIKPS 1348
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +1
Query: 412 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPYPSTRDTHSLTPSC-VWT 552
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 342 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 470
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 406 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPS 510
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 392 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTP 529
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 412 TSPSKPCSRCTRPVVPPVSCWTPATVSPTP 501
T+P+ P + T P P + TP T + TP
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTP 159
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 223 GYLRVRIPLLLCASSPTYESFCPMPTITP*WRGLPT 116
G + +++ LLL +SSP + S P+ TP +GL T
Sbjct: 275 GVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 385 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 513
S+ ST+ P T KP + RP+ P + P + P P T
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRT 294
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 109 GNTARGASSPAKPALHIPEPLSTT 38
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 109 GNTARGASSPAKPALHIPEPLSTT 38
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 526 SAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 422
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 403 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPYPSTRDTHSLTPSCV 546
PP T P+ P S V PP + TPAT P P PS + S P+ V
Sbjct: 332 PPVTEPAPPSS----VVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTPV 378
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 388 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPSC 543
KH T PP S + P P+S TP+ SP + S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_13009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +2
Query: 401 ARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPSRHPASGL 553
+ H H + A A+ H+ A CL H+T I+T H L
Sbjct: 71 SNHACPHQTEAFAIESHPSHKTEAFAIESCLSHQTEAFDIKTRLSHQIEAL 121
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 403 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 501
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 406 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSLTPSCVWT 552
P TS + S P +TP T S TP PS T S TP+ +T
Sbjct: 58 PTTSYTPTTSYTPTTSYTPTPSYTPTT-SYTPTPSYTSTTSYTPTTSYT 105
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +2
Query: 452 SYHRYRAGLRRRCLP---HRTHLRGIRTPSRHPASGLGRSRPHRLPHE---DPHRARLLV 613
++ Y+ LR P H+T LR +TP RH + L + + H+ H+ RL
Sbjct: 59 TFRHYKTPLRHHKTPYLQHKTPLRQHKTPLRHHKTPLRQHKTSLQQHKISLQQHKTRLRQ 118
Query: 614 H 616
H
Sbjct: 119 H 119
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 493 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVRRT 320
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 319 G 317
G
Sbjct: 147 G 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,401,937
Number of Sequences: 59808
Number of extensions: 618975
Number of successful extensions: 2671
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 2178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2638
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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