Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D07
         (999 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)             248   5e-66
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)                 82   8e-16
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)                      61   1e-09
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)                      60   2e-09
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)              60   4e-09
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)                 56   4e-08
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)                50   2e-06
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)               48   2e-05
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)                46   5e-05
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)                      44   1e-04
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.002
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)                  38   0.010
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)                38   0.017
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.022
SB_29175| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.022

>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 385

 Score =  248 bits (607), Expect = 5e-66
 Identities = 109/151 (72%), Positives = 122/151 (80%)
 Frame = +1

Query: 136 EKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRI 315
           ++YN + P VKRLMREA EL  ATE Y A+PLEDNLFEWHFTV+GP  TEF GG YHGRI
Sbjct: 3   KQYNLRSPAVKRLMREAKELRNATELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRI 62

Query: 316 LLPKEYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
           +LP EYPM PP I+LLTPNGRFEI KKICLS+S HHPETWQPSWSIRT L+A+I FMPT 
Sbjct: 63  ILPPEYPMKPPSIMLLTPNGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAIIGFMPTK 122

Query: 496 AEGTIGSLDYTPAERKILAKKSTNWSCSQCG 588
             G IG+LDYTP ER +LA+KS  W CS CG
Sbjct: 123 GAGAIGALDYTPKERAVLARKSMEWKCSTCG 153


>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
          Length = 123

 Score = 81.8 bits (193), Expect = 8e-16
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +1

Query: 235 DNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT 366
           DNLFEWHFTV+GP  TEF GG YHGRI+LP EYPM PP I+LLT
Sbjct: 1   DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44


>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 1282

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
 Frame = +1

Query: 226  PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKK--I 399
            P E N FEW   + GP GT + GG +   +  P +YP  PP    LT      I +   +
Sbjct: 1149 PDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGDV 1208

Query: 400  CLSI---------SGHHP-ETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYTPAERK 543
            C+SI         SG  P E W P+ ++RT LL++I+ +  P   +  ++D +   RK
Sbjct: 1209 CISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRK 1266


>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 226

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
 Frame = +1

Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
           KR+ RE  E+       C A P  D+L+EW+ T+ GP G+ +EGG++   I  P +YP  
Sbjct: 98  KRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFK 157

Query: 343 PPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMP--TPAEGTIGS 516
           PP                +CL I     ++W P+ +I   LL++ + +    PA+  +GS
Sbjct: 158 PP-------------KGMVCLDIL---KDSWSPALTISKVLLSICSLLTDCNPADPLVGS 201

Query: 517 L 519
           +
Sbjct: 202 I 202


>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
 Frame = +1

Query: 232 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINK--KICL 405
           +++L++W   V GP GT +E G +   ++ PKEYP  PP +  ++      ++K  ++C+
Sbjct: 359 DEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCI 418

Query: 406 SISGHHP-----------ETWQPSWSIRTALLALIAFMPTPAEGTIGSLD 522
           SI  H P           E W+P  ++ T +L++I+ +  P + +  ++D
Sbjct: 419 SIL-HEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVD 467


>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
          Length = 200

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +1

Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
           KR+ RE  E+       C A P  D+L+EW+ T+ GP G+ +EGG++   I  P +YP  
Sbjct: 138 KRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFK 197

Query: 343 PP 348
           PP
Sbjct: 198 PP 199


>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
          Length = 181

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +1

Query: 202 ATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHI 354
           +T    A P  D L+EW+ T+ GP G+ +EGG++   I  P +YP  PP +
Sbjct: 38  STAAKSAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88


>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 151

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = +1

Query: 226 PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP-------NGRFE 384
           P +D++ + H  + GP  T +EGG ++  I  P +YP+ PP + L+T        N    
Sbjct: 5   PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64

Query: 385 INKKICLSISG 417
            N K+CLSI G
Sbjct: 65  RNGKVCLSIIG 75


>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
          Length = 190

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
 Frame = +1

Query: 268 GPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP--NGRFEINKKICLSISGHHPE-TWQ 438
           G +GT +  GI+   I +P+ YP  PP +  +TP  +   + + +ICL      P+  W+
Sbjct: 4   GAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWK 63

Query: 439 PSWSIRTALLALIAFMPTP 495
           P+ +I + L  ++  M  P
Sbjct: 64  PALNISSVLSTILILMAEP 82


>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 145

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
 Frame = +1

Query: 232 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKK--ICL 405
           E N+  W   +  P+   +  G +   I  P EYP  PP I   T      I++K  +CL
Sbjct: 20  ESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCL 78

Query: 406 SISGHHPETWQPSWSIRTALLALIAFMPTP 495
            I    PE W+P+      + AL+A +  P
Sbjct: 79  PIIS--PENWKPATKTEQVIQALLALVHDP 106


>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 897

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
 Frame = +1

Query: 166  KRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTE--FEGGIYHG------RIL 318
            KRLM+E  +++  TE  + A  ++DNLFEW+  +    G    +   +  G       I 
Sbjct: 737  KRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796

Query: 319  LPKEYPMHPPHIILLTP--NGRFEIN-KKICLSISGHHPETWQPSWSIRTALLALIA 480
             P+ +P  PP + +L P   G F ++   IC+ +    P+ W  ++++   +L   A
Sbjct: 797  FPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELL--TPKGWSSAYTVEAVVLQFSA 851


>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
          Length = 841

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 262 VQGPKGTEFEGGIYHGRILLPKEYPMHPP 348
           ++GP  T FEGG Y+  I++P+ YP +PP
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPP 721


>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
          Length = 739

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +1

Query: 262 VQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP-NGRFEIN----KKICLS 408
           ++GP GT ++ G++   ILLP  YP  PP    L+  NGR   N     K+C++
Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693


>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 710

 Score = 37.1 bits (82), Expect = 0.022
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 268 GPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT 366
           GP GT +EGG++  R+ LP++YP   P I   T
Sbjct: 56  GPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFT 88


>SB_29175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 43

 Score = 37.1 bits (82), Expect = 0.022
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +1

Query: 157 PGVKRLMREAIELAEATEEYCARPLE 234
           P VKR+M+EA ELA+ T EY A PLE
Sbjct: 18  PAVKRIMKEAKELAQPTYEYFAAPLE 43


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,215,919
Number of Sequences: 59808
Number of extensions: 474448
Number of successful extensions: 993
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2979300250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)