Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C17
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 134 7e-32
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 100 1e-21
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 94 9e-20
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 28 6.4
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 28 6.4
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 134 bits (323), Expect = 7e-32
Identities = 68/195 (34%), Positives = 111/195 (56%), Gaps = 3/195 (1%)
Frame = +1
Query: 7 IASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIK--GVDLKLANKVYIANGNELND 180
+ + G + ++ K FP D K F D Q + + G + +AN+++ G E+ +
Sbjct: 46 LGARGNTATQMTKTFHFPTDVPEK--FHDFLQALNASNSDGNQILMANRLFAQMGFEILE 103
Query: 181 QFAVVSRDVFNSEVQNLNFGKNEEAA-NIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLV 357
+F S++ F++E+ +++ KN A + +N WVE T +IKNL+ + T LV
Sbjct: 104 EFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEGMFNKDTILCLV 163
Query: 358 NAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPYV 537
NA+YFKGSW F++ TQ F + IQV MY+ +F Y ESS L +++ELPY
Sbjct: 164 NAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESSTLGCQIVELPYA 223
Query: 538 GEESSLLVVLPNKID 582
GE+ S++V+LPN++D
Sbjct: 224 GEKLSMVVLLPNEVD 238
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 100 bits (239), Expect = 1e-21
Identities = 45/153 (29%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 127 DLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRI 303
++ +AN +++ + +F + + +++++ +++ + E A +N WVE+ T K+I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 304 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDF 483
+L+ P + T+ LVNAIYFKG W F KE + F ++V M+++ F
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168
Query: 484 AYGESSELDAKLIELPYVGEESSLLVVLPNKID 582
Y S + KL+ELPYV + S+++VLP++ +
Sbjct: 169 KYLHSDKYKCKLLELPYVDTQLSMVLVLPDETE 201
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 93.9 bits (223), Expect = 9e-20
Identities = 44/153 (28%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Frame = +1
Query: 127 DLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNKRI 303
+++L NK++ + E+ ++F +R+ ++SE+ ++F K +A +N WV T I
Sbjct: 54 EIQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNI 113
Query: 304 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHV--NKDKTIQVPTMYKRG 477
K L+ ++S T+ ++VNA+YFKG WK +F +E T F V + + I+V M ++
Sbjct: 114 KELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKM 173
Query: 478 DFAYGESSELDAKLIELPYVGEESSLLVVLPNK 576
+ +++ +++ELPY G++++++++LP +
Sbjct: 174 KVNFYYDADIKCRVVELPYSGDDTAMVIILPEE 206
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 100 QKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWV 279
Q+ I+ + + YIA +L ++ + + ++V ++ G +EAA W
Sbjct: 808 QQCTEIEEAMMNEVQRFYIAWNKKL-EELKRRNGQMSPTDVNSMWIGATDEAAEGHFVWE 866
Query: 280 EDHTNKRIKNLV--DPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQ---DRPF 426
D T N +P+ CV + A YF G W D F ++ ++PF
Sbjct: 867 GDGTVVNYTNWFRGEPNDHSGKEDCVEMMAGYFAGYWNDNFCEQFRNFICEKPF 920
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 429 MEWTVLCQFLIKFVFPTSLK--VNCIYENTLC 340
M++ +L VFPT K V CIYEN C
Sbjct: 405 MKYVYTQSWLFTLVFPTQQKRVVQCIYENESC 436
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 311 WWIL---VRWTVAHSVFS*MQFTLREVGKTN 394
WW++ VRW + H + LR+VGK N
Sbjct: 224 WWLIPESVRWLLTHERSKEAEMILRKVGKFN 254
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 157 ANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDH 288
A G ++ QF+V+ R +F S +++ EE + W++ H
Sbjct: 116 ATGAPVSRQFSVLLRQLFESYNSSVSTTNPEEFCRTVLAWLDQH 159
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.132 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,451,106
Number of Sequences: 59808
Number of extensions: 321518
Number of successful extensions: 564
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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