Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C03
(424 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 239 7e-64
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 1e-35
SB_9825| Best HMM Match : EFG_C (HMM E-Value=1.3e-33) 113 6e-26
SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15) 84 5e-17
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 36 0.010
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_19451| Best HMM Match : EFG_C (HMM E-Value=1.8e-13) 34 0.056
SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.074
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09) 31 0.30
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 31 0.39
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9) 30 0.69
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 30 0.91
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 29 1.2
SB_1075| Best HMM Match : rve (HMM E-Value=0.0089) 29 1.6
SB_52277| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 29 2.1
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 29 2.1
SB_38749| Best HMM Match : SASP_gamma (HMM E-Value=4.1) 29 2.1
SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038) 29 2.1
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 2.1
SB_30202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 28 2.8
SB_28178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_4606| Best HMM Match : HlyIII (HMM E-Value=0.002) 28 3.7
SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6) 28 3.7
SB_14468| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 27 4.8
SB_37175| Best HMM Match : GvpH (HMM E-Value=2.5) 27 4.8
SB_15551| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 27 4.8
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 27 6.4
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 6.4
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 27 6.4
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_17539| Best HMM Match : Cu2_monoox_C (HMM E-Value=1e-24) 27 6.4
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 27 6.4
SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8) 27 8.5
SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 27 8.5
SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19) 27 8.5
SB_44255| Best HMM Match : RVT_1 (HMM E-Value=7.6e-29) 27 8.5
SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_11135| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 239 bits (585), Expect = 7e-64
Identities = 112/140 (80%), Positives = 119/140 (85%)
Frame = +3
Query: 3 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 182
DAIHRGGGQIIPT RR LYAC+LTA+P L+EPVY EIQCPE AVGGIYGVLNRRRG V
Sbjct: 687 DAIHRGGGQIIPTARRVLYACMLTAKPCLLEPVYSVEIQCPESAVGGIYGVLNRRRGQVL 746
Query: 183 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPCEPNSKP 362
EES VAGTPMF+VKAYLPV ESFGFTADLRS TGGQAFPQCVFDHWQ+LPGD + S P
Sbjct: 747 EESNVAGTPMFIVKAYLPVMESFGFTADLRSKTGGQAFPQCVFDHWQVLPGDVHDLASMP 806
Query: 363 YVVVQETRKRKGLKEGLPDL 422
VV TRKRKGLKEG+P L
Sbjct: 807 GQVVANTRKRKGLKEGIPAL 826
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 145 bits (352), Expect = 1e-35
Identities = 63/115 (54%), Positives = 82/115 (71%)
Frame = +3
Query: 3 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 182
+ IHRGGGQIIPT RR Y+ L A PRLMEP + E+Q P V +Y VL RRRGHV
Sbjct: 667 EPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYFFVEVQAPADCVSSVYTVLARRRGHVT 726
Query: 183 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPCE 347
+++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP +
Sbjct: 727 QDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 781
>SB_9825| Best HMM Match : EFG_C (HMM E-Value=1.3e-33)
Length = 119
Score = 113 bits (272), Expect = 6e-26
Identities = 48/91 (52%), Positives = 65/91 (71%)
Frame = +3
Query: 75 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFG 254
A PRLMEP + E+Q P V +Y VL RRRGHV +++ V G+P++ +KA++P +SFG
Sbjct: 1 ATPRLMEPYFFVEVQAPADCVSSVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFG 60
Query: 255 FTADLRSNTGGQAFPQCVFDHWQILPGDPCE 347
F DLR++T GQAF VF HWQI+PGDP +
Sbjct: 61 FETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 91
>SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15)
Length = 549
Score = 83.8 bits (198), Expect = 5e-17
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 78 QP-RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFG 254
QP RLM +Y C IQ +G +Y V+ RR G V E G+ +F V+A LPV ESFG
Sbjct: 407 QPMRLMAAMYTCHIQATAEVLGRMYAVIARREGRVLSEEMKEGSDVFDVEAVLPVAESFG 466
Query: 255 FTADLRSNTGGQAFPQCVFDHWQILPGDP 341
F+ ++R T G A PQ +F HW+ + DP
Sbjct: 467 FSEEIRKRTSGLANPQLMFSHWEAIDLDP 495
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 36.3 bits (80), Expect = 0.010
Identities = 24/59 (40%), Positives = 29/59 (49%)
Frame = +1
Query: 223 RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA 399
RR PS+ S +PP+ TP RSRS RS T ++P T S R RGKA
Sbjct: 1348 RRPSPSSLGSLAPPSRTSTP---RSRSTPRSRSRSRTRTPSTPFTPSTTSSRASSRGKA 1403
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 35.9 bits (79), Expect = 0.014
Identities = 36/86 (41%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +1
Query: 160 TDGAGTCSRSRKSPAHPCSW*RRTC----PSTSRSGSPPTCAPTPEGRRSRSASSITGRS 327
T AGT + SR+S P S R+ TSR+ S PT TP RSRS S S
Sbjct: 166 TAAAGTPAGSRRSSISPASPALRSSLGSLAPTSRT-STPTSRSTP---RSRSRSRARTPS 221
Query: 328 CPETRASP-TPSH-TLSYRKQERGKA 399
P T ++P TPS T S R RG A
Sbjct: 222 TPSTPSTPSTPSTITTSSRASSRGSA 247
>SB_19451| Best HMM Match : EFG_C (HMM E-Value=1.8e-13)
Length = 238
Score = 33.9 bits (74), Expect = 0.056
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 138 GGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQ 290
G + +NRR G V G F + A +P+N+ FG+ +LRS T G+
Sbjct: 155 GTVIAGVNRRHGQVTGTDANEG--YFTLFAEVPLNDMFGYATELRSQTQGK 203
>SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1503
Score = 33.5 bits (73), Expect = 0.074
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = -3
Query: 206 CAGDLRLLEHVPAPSVQHAVDTTDRHLRTLDLAKVHGFHKP-GLRGQQTRV---QASPSR 39
C ++LL+ VP DT RHL +++ A +H +KP LRG++T + S +
Sbjct: 633 CKSTIKLLDLVPGVE-----DTRKRHLVSVEAAILHKLYKPISLRGKRTTLLPFWQSKRQ 687
Query: 38 WNDLT-ATSVNGV 3
NDL TS GV
Sbjct: 688 QNDLVLRTSTGGV 700
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.9 bits (69), Expect = 0.23
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 73 PRSPGLWNPCTFAXXXXXXXXXXXXTAC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRS 252
P +P PCT + T C T + + +P+ P + + PST +
Sbjct: 54 PSTPS--TPCTHSTPSAPSTPSTPSTPC-TPSTPSTPSTPSTPSTPSTPSAPSTPSTPST 110
Query: 253 GSPPTCAPTPEGRRSRSASSITGR-SCPETRASP-TPS 360
S P+ TP + SA S S P T ++P TPS
Sbjct: 111 PSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPS 148
Score = 29.9 bits (64), Expect = 0.91
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +1
Query: 73 PRSPGLWNPCTFAXXXXXXXXXXXXTAC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRS 252
PR+P PCT + T T + + + +P+ P + + PST +
Sbjct: 419 PRTPS--TPCTHSTPGTPSTPSTPSTPS-TPSTPSLTHTPSTPSTPSTPSTPSTPSTPST 475
Query: 253 GSPPTCAPTPEGRRSRSASSITGR-SCPETRASP-TP 357
S P+ TP + S SS S P T ++P TP
Sbjct: 476 PSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTP 512
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 193 KSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGR-SCPETRASP-TPS 360
++P+ PC+ PST + S P+ TP + S S S P T ++P TPS
Sbjct: 420 RTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPS 477
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 169 AGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGR-SCPETRA 345
A C+ + +P+ P + R+ PST + S P+ TP + S S+T S P T +
Sbjct: 630 AHLCTCTLSTPSTPSTPSTRSTPSTPSTPSTPSTPSTPS---TPSTPSLTHTPSTPSTPS 686
Query: 346 SP-TPS 360
+P TPS
Sbjct: 687 TPSTPS 692
Score = 27.1 bits (57), Expect = 6.4
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 160 TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSC-PE 336
T + R+ +P+ PC+ + PST + S P+ T + S S C P
Sbjct: 23 TPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPS 82
Query: 337 TRASP-TPS 360
T ++P TPS
Sbjct: 83 TPSTPSTPS 91
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 196 SPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASP-TPS 360
+P+ PC+ + PST S P+ TP + S S S P T ++P TPS
Sbjct: 269 TPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPS--APSTPSTPSTPSTPS 322
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 196 SPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASP-TPS 360
+P+ PC+ + PST S P+ TP + S S S P T ++P TPS
Sbjct: 819 TPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPS--APSTPSTPSTPSTPS 872
>SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09)
Length = 533
Score = 31.5 bits (68), Expect = 0.30
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 CPSTS-RSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 354
CP T+ R+ + P +P P RRS S S + +S P +S T
Sbjct: 217 CPETTPRTPNVPPTSPEPTTRRSTSTESTSSQSTPSPASSVT 258
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 31.1 bits (67), Expect = 0.39
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 244 SRSGSPPTCAPTPEGRRSRSASSITGRSCP--ETRASPTPSHTLS--YRKQERGKA*RKV 411
S + SP TP R+S + ++ G SCP +R+S S ++ +R KA +
Sbjct: 81 SNNSSPKPSPKTPRTRKSSNGRNLAGNSCPTSTSRSSERLRQKASREFKLPQRDKALESI 140
Query: 412 SP 417
SP
Sbjct: 141 SP 142
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 30.3 bits (65), Expect = 0.69
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 274 PTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSPI 420
PT + + SRS+S ++G S TR P+ R ++RGK +S +
Sbjct: 441 PTEKEKTSRSSSELSGDSQGSTRPRCRPAEPEGTRDRKRGKESESLSKV 489
>SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 30.3 bits (65), Expect = 0.69
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 181 SRSRKSPAH-PCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 357
+R+R H P SW R C S GSP RR S ITGR+ P + S
Sbjct: 304 NRTRPGLNHRPQSWSPR-CDKKSTEGSPIDNRDLSNSRRLMSGVPITGRTTPMSDESSEA 362
Query: 358 SHTLS 372
S +L+
Sbjct: 363 SVSLT 367
>SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9)
Length = 297
Score = 30.3 bits (65), Expect = 0.69
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +2
Query: 215 RGEGVPARQRVVRVHRRPALQHRRAGVPAVRLRSLADPARRPVRAQLQAIRCRTGNKKEE 394
R V +R+RVV RR Q RRA VR R + RR V + +AI R +
Sbjct: 36 RRRAVVSRRRVVTTRRRVVTQRRRA---TVRRRRVVTTRRRAVTRRRRAIVSRRRRRGSS 92
Query: 395 RLEGRS 412
RS
Sbjct: 93 SSSQRS 98
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 29.9 bits (64), Expect = 0.91
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 184 RSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEG-RRSRSASSITGRSCPETRASPTPS 360
RSR SP HP SW R S S S + + +PTPE RSR+ S P++R S T +
Sbjct: 347 RSR-SPIHPRSWSRSVSHSLSHSSA--SRSPTPEDWDRSRTPSR---SPTPDSR-SQTSN 399
Query: 361 HTLSYRKQERGK 396
S + ++R K
Sbjct: 400 GDKSRKHRKRKK 411
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 29.9 bits (64), Expect = 0.91
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = -1
Query: 349 GSHGSPGRICQ*SKTHCGNACPPVLERRSAVNPNDSLTGR-----YAFTTNMGVPATCDS 185
G SP +C H G C +ER S NPND++TG Y + +PA C
Sbjct: 1478 GKKFSPTGLC-----HAGYYC---IERASVPNPNDTMTGAPCPPGYYCNSGFHIPAACPR 1529
Query: 184 SNTCPR 167
P+
Sbjct: 1530 GTYGPK 1535
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 29.9 bits (64), Expect = 0.91
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 238 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGK 396
+T S T AP P S + S T + + A+PT S T+ Q +G+
Sbjct: 836 ATKCSSDSTTTAPPPAPTSSLATSGNTSTTISDNTATPTSSRTMQIPGQTQGR 888
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.9 bits (64), Expect = 0.91
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 184 RSRKSPAHPCSW*RRTCPSTSRSG-SPPTCAPTPEGRRSRSASSITGRSCPETRASPTPS 360
R R+SP+ P RR S SR PT +P P RR + S R SP P
Sbjct: 886 RRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPM 945
Query: 361 HTLSYRKQERGKA*RKVSP 417
+ +R +A SP
Sbjct: 946 RSSPLPPPQRKRASTPPSP 964
Score = 29.9 bits (64), Expect = 0.91
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 184 RSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSH 363
R RKSP+ RR PS S P +P P +R R+++ + R ASP
Sbjct: 921 RRRKSPSPSPPRRRRRSPSNSPP--PMRSSPLPPPQRKRASTPPSPRRARRKVASPEEQD 978
Query: 364 TLSYRKQERGKA*RKVSP 417
R++ G+ R VSP
Sbjct: 979 ----RQKSNGRNSRSVSP 992
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 238 STSRSGSPPTCAPTPEGRRS----RSASSITGRSCPETRASPTPSHTLS 372
+TS S PPT T RS RS S I GRS +R +PS L+
Sbjct: 101 TTSSSYYPPTSMATLRASRSKSPVRSTSPILGRSSSPSRRGGSPSRILN 149
>SB_1075| Best HMM Match : rve (HMM E-Value=0.0089)
Length = 1617
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 241 TSRSGSPPTCAPTPEGRRSRSASSITG 321
T+ +G P P PE +RSASS+ G
Sbjct: 1203 TASAGMPSAHTPAPESNSARSASSVIG 1229
>SB_52277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 265 SAVNPNDSLTGRYA-FTTNMGVPATCDSSNTCPRRLFSTP*IP-PTATS 125
S N N+ + Y T TC S PR L+ TP IP PT TS
Sbjct: 33 SVPNTNEPIPNTYEPIQTPKSPYQTCTGSQRPPRDLYQTPTIPYPTPTS 81
>SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 241 TSRSGSPPTCAPTPEGRRSRSASSITG 321
T+R+G+P P PE + SASS+ G
Sbjct: 829 TARAGTPSAHTPVPESNSAWSASSVIG 855
>SB_3585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 9 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 107
+ R +I+PT RR + LLT+ +PVY+
Sbjct: 538 VRRSLQEIVPTQRRKAFVALLTSTVNAKQPVYI 570
>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
Length = 808
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 324 ILPGDPCEPNS-KPYVVVQETRK 389
ILP PCEP+S KPY E R+
Sbjct: 65 ILPASPCEPDSPKPYTPESEGRE 87
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 220 TTNMGVPATCDSSNTCPRRLFSTP*IPPTATSGHWISQRYTGSISLGCAVNRH 62
T+N +P+ S+ + P S IPP TS IS T + S+ R+
Sbjct: 923 TSNESIPSLTTSNESIPSLTTSNKSIPPLTTSNESISSLTTSNESIPSLTTRN 975
>SB_38749| Best HMM Match : SASP_gamma (HMM E-Value=4.1)
Length = 155
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/60 (26%), Positives = 22/60 (36%)
Frame = +1
Query: 169 AGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRAS 348
A C R+ K PC W +C G E R SA GR+ + +A+
Sbjct: 21 AAACRRATKRSCTPCCWWSSSCNYGYVYGYAKATVGASEARSGTSAKYFRGRTGRQKKAA 80
>SB_15117| Best HMM Match : Pox_A32 (HMM E-Value=0.038)
Length = 771
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 199 PAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 321
P+ P R + +G P PTPE + SASSI G
Sbjct: 441 PSEPQPGRRLRADDAASAGMPSAHTPTPESNSAWSASSIIG 481
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = +1
Query: 235 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVS 414
P+ S SPP P P RRS S S +S R S + S R + R RK S
Sbjct: 1095 PAVKSSPSPPPTKPRP-SRRSLSKS--VSKSPSPARKGKRSSSSSSSRSRSRSPRRRKRS 1151
Query: 415 P 417
P
Sbjct: 1152 P 1152
>SB_30202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 280 PEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQE 387
P GR +RS+ S RS P T+ S T S T S + E
Sbjct: 11 PRGRSNRSSGSSNSRSTPSTQ-STTNSSTASEQNNE 45
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 235 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLS 372
PS+S S SPP + + S S+SS + S + +S + S + S
Sbjct: 573 PSSSSSSSPPPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 618
>SB_28178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1
Query: 244 SRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQER 390
SRS SP + RR RSAS RS R S + S L + QER
Sbjct: 13 SRSSSPSE--RSRRRRRDRSASRSVSRSPSPGRTSMSSSQVLQVKMQER 59
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 235 PSTSRSGSP-PTCAPTPEGRRSRSASS 312
PST+ +G P T APT GR+ S+SS
Sbjct: 4222 PSTTHNGLPVSTAAPTTNGRKEVSSSS 4248
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = -1
Query: 283 PVLERRSAVNPNDSLTGRYAFTTNMGVPATCDSSNTCPRRLFSTP*IPPTATSGHWISQ 107
P+ E R P DS T A T+ + ++ P R S P P T+ SQ
Sbjct: 956 PLYEERCQETPTDSSTASLAHTSPAHLATASQITHPLPHRTISIPYPSPPHTTSSQSSQ 1014
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 181 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPS 360
SR R P ++ + RS S P+P RSR + S T RS +R S + S
Sbjct: 169 SRDRYRERRPRKSRSKSLDRSRRSRSRSYSRPSPSPYRSRRSRSRTRRSRSRSRRSRSRS 228
Query: 361 HTLSYRKQERGK 396
R++ R +
Sbjct: 229 RDRRPRRRSRDR 240
>SB_4606| Best HMM Match : HlyIII (HMM E-Value=0.002)
Length = 458
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3
Query: 176 VPAPSVQHAVDTTDRHLRTLDLAKVHGFHKPGLRGQQTRV 57
+PA S HA DTT R L + L K +G H G + QT V
Sbjct: 201 LPAVSKLHASDTTKRKL--VKLGKRYGCHTCGRKRWQTFV 238
>SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6)
Length = 208
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +1
Query: 178 CSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETR 342
C ++ K PC W +C G A E R SA ++GR+ + R
Sbjct: 84 CRKATKRSCTPCCWWSSSCYYGYVYGYAKATAGASEARPGTSAKYVSGRTGRQKR 138
>SB_14468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 193 KSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 321
+ P PC R+T P +R+ P C P P S SS +G
Sbjct: 223 RHPQIPCVLRRKTFPCPNRTDQSPPCQP-PNATEVMSWSSSSG 264
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 274 PTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA 399
P+P S+SS++ S P+ S TPS T S K GKA
Sbjct: 178 PSPVKSPGHSSSSLSSESSPKHSPSATPSTTRS--KASLGKA 217
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -3
Query: 287 PSGVGAQVGGEPERLVDGQVRLHHEHGCAGDLRLLEHVPAPSVQHAVDTTDRHLRTLDL 111
PSGV +VG +L+DG VR+ H L++ P P+ Q D HLR + L
Sbjct: 301 PSGVSERVGKWHAQLIDG-VRIKEGH-VPLILKIAAVCPIPN-QKPPKAIDSHLRPISL 356
>SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +1
Query: 190 RKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTL 369
R+ P P + RRT S + R R CP+ P+HT
Sbjct: 18 RRKPGRPKTTWRRTILSELSKHQLTLAEAQHKARDRRKWKRFVAALCPDGDEEQVPAHTY 77
Query: 370 SYRKQE 387
Y K E
Sbjct: 78 RYLKPE 83
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 244 SRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPS 360
+R G+PPT +P+PE S IT PE SPT S
Sbjct: 1580 TRDGTPPT-SPSPEATNPLSDPKITTFKVPE---SPTSS 1614
>SB_37175| Best HMM Match : GvpH (HMM E-Value=2.5)
Length = 340
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 244 SRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPS 360
+R G+PPT +P+PE S IT PE SPT S
Sbjct: 10 TRDGTPPT-SPSPEATNPLSDPKITTFKVPE---SPTSS 44
>SB_15551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 196 TCDSSNTCPRRLFSTP*IP-PTATS 125
TC S PR L+ TP IP PT TS
Sbjct: 83 TCTGSQRPPRDLYQTPTIPYPTPTS 107
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 259 PPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQ 384
P + A + EGR+SRS + P +R P +H SY +Q
Sbjct: 198 PDSRAMSNEGRKSRSYEGSPSETSPYSRGYPPTTHR-SYSEQ 238
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 247 RSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSP 417
RSG+ + + +P GR+SRS S P + + RK+ R R SP
Sbjct: 176 RSGTSKSRSRSPSGRKSRSRSPRKRSRSPRKMLRSPRKRSRTPRKRSRSPRKRSRSP 232
Score = 27.1 bits (57), Expect = 6.4
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 181 SRSRK-SPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 357
S+SRK S + S ++ S SRS S + + RSRS S R +++ S +
Sbjct: 314 SKSRKKSGSRSNSQSKQKSRSRSRSNSQSRKKSSSKKSRSRSRSISQSRKKVKSKKSRSR 373
Query: 358 SHTLS-YRKQERGKA*RKVS 414
SH+ S RK+ R K R S
Sbjct: 374 SHSNSPSRKKARSKKSRSRS 393
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 232 CPSTSRSGSPPTCAPTPEGR 291
CP TS + +P APT +GR
Sbjct: 1511 CPRTSTTSAPAATAPTRQGR 1530
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.1 bits (57), Expect = 6.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Frame = -3
Query: 278 VGAQVGGEPERLVDGQV-------RLHHEHGC--AGDLRLLEHVPAPSVQHAVDTT-DRH 129
V A+ G+P R VD Q HH G L L+H S+ +DTT DRH
Sbjct: 307 VCAKKNGKPPRTVDFQSLNLHATRETHHTQSPFHQGTLNTLQHEEKQSLTAGMDTTDDRH 366
Query: 128 LRT 120
L T
Sbjct: 367 LTT 369
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 256 SPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA 399
S P +PT + R+ASS + S P A PTP+ + K G++
Sbjct: 995 SKPQASPTTD---RRAASSSSNHSTPVNSAPPTPTKNATPSKGTPGQS 1039
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 256 SPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSH 363
SPP+ +PTP R+S+ S P+ A +P H
Sbjct: 373 SPPSWSPTPSMRKSKKKEKRQSSSRPKD-ADSSPQH 407
>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 280 PEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGK 396
PE ++ S I P T+A P P +SY + K
Sbjct: 167 PEAKQVTKPSPIVQEEAPRTQAIPKPGERMSYAQMAAQK 205
>SB_17539| Best HMM Match : Cu2_monoox_C (HMM E-Value=1e-24)
Length = 723
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -2
Query: 165 VCSARRRYHR--PPPPDTGSRKGTRVP 91
VC + R+ R PPPDT +G RVP
Sbjct: 107 VCGSPPRHSRFVGPPPDTQGTQGLRVP 133
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 235 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 357
P T S C P P+G + ++ CP T+++ P
Sbjct: 382 PGTYSSSGVEPCLPCPKGTYQTAIGQMSCSECPGTKSTHGP 422
>SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 241 TSRSGSPPTCAPTPEGRRSRSASSITG 321
T+ +G+P P PE + SASS+ G
Sbjct: 354 TASAGTPSAHTPVPESNSAWSASSVIG 380
>SB_58633| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=2.8)
Length = 599
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 199 PAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 321
P+ P R + +G P P PE + SASSI G
Sbjct: 480 PSEPQPGRRLRADDAASAGMPSAHTPAPESNSAWSASSIIG 520
>SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1001
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 172 GTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASP 351
G C + ++ + S + + + +GSP + +PT +R S S T R ET A
Sbjct: 365 GACGKRKEDEENTSS--QGSSDLDTSTGSPFSMSPTRALQRQASVSVETRRKRDETHARD 422
Query: 352 TPSHTLSYRKQE 387
S + Y K +
Sbjct: 423 QLSRIVDYCKTQ 434
>SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 722
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 241 TSRSGSPPTCAPTPEGRRSRSASSITG 321
T+ +G+P P PE + SASS+ G
Sbjct: 354 TASAGTPSAHTPVPESNSAWSASSVIG 380
>SB_44255| Best HMM Match : RVT_1 (HMM E-Value=7.6e-29)
Length = 1017
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 287 AGVPAVRLRSLADPARRPVRAQLQAIRCRTGNKKEER 397
AG+ AV ++ D +RRPV +A+ CR ++ +++
Sbjct: 606 AGIGAVLIQIADDGSRRPVYYASRALSCRRQSRGKQQ 642
>SB_37846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 199 PAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 321
P+ P R + +G P P PE + SASSI G
Sbjct: 339 PSEPQPGRRLRADDAASAGMPSAHTPAPESNSAWSASSIIG 379
>SB_11135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 221 HHEHGCAGDLRLLEHVPAPSVQH 153
H C G ++LL H+P P + H
Sbjct: 53 HRVLPCRGQVQLLRHIPHPRMHH 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,083,308
Number of Sequences: 59808
Number of extensions: 374633
Number of successful extensions: 1576
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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